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2024-05-03 09:19:29

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 63

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0450 molecular chaperonechromosome CDS447344 528 - 0.287879
NA SAR11_0282 Uncharacterized protein involved in biosynthesis of c-type cytochromeschromosome CDS285354 381 - 0.228346
NA SAR11_1364 Glutaredoxinchromosome CDS1298056 255 + 0.270588
NA SAR11_0378 NifU-like domain proteinchromosome CDS369707 543 + 0.302026
NA SAR11_0712 hypothetical SurA-like proteinchromosome CDS694313 918 - 0.202614
NA SAR11_0367 Chaperone proteinchromosome CDS357731 1131 - 0.355438
NA SAR11_1365 SelR domainchromosome CDS1298312 375 - 0.346667
NA SAR11_0554 carbamoyltransferasechromosome CDS547210 1734 + 0.258362
NA SAR11_0991 Peptidase family M48chromosome CDS971424 777 - 0.343629
NA SAR11_0736 Predicted molecular chaperone distantly related to HSP70-fold metalloproteaseschromosome CDS720637 1128 + 0.281028
NA SAR11_1227 ADP-ribosylglycohydrolasechromosome CDS1171935 954 + 0.292453
NA SAR11_1731 unknownchromosome CDS1136254 165 - 0.375758
NA SAR11_0381 hypothetical proteinchromosome CDS372370 387 + 0.21447
NA SAR11_1199 conserved hypothetical proteinchromosome CDS1149091 555 + 0.304505
NA SAR11_0642 Trypsin-like serine proteasechromosome CDS627169 1116 - 0.323477
NA SAR11_0178 Heat shock proteinchromosome CDS180750 507 - 0.242604
NA SAR11_1231 Thioredoxinchromosome CDS1175833 369 - 0.281843
NA SAR11_0113 DsbA-like proteinchromosome CDS123975 516 + 0.277132
bcp SAR11_0819 bacterioferritin comigratory proteinchromosome CDS793367 468 - 0.258547
bsaA SAR11_1004 probable glutathione peroxidasechromosome CDS983880 513 - 0.265107
ccdA SAR11_0781 probable holocytochrome-c synthase ccdAchromosome CDS759434 708 + 0.265537
ccmC SAR11_0287 heme exporter proteinchromosome CDS288782 711 - 0.305204
ccmE SAR11_0285 Cytochrome c-type biogenesis proteinchromosome CDS288128 420 - 0.266667
ccmF SAR11_0284 Cytochrome c-type biogenesis proteinchromosome CDS286249 1878 - 0.264643
ccmG SAR11_0283 Cytochrome C biogenesis protein ccmGchromosome CDS285731 522 - 0.250958
clpP SAR11_0880 ATP-dependent Clp protease proteolytic subunitchromosome CDS844691 612 + 0.318627
clpX SAR11_0881 ATP-dependent clp proteinase regulatory chain Xchromosome CDS845394 1269 + 0.333333
coxW SAR11_1031 cytochrome c oxidase assembly protein (isoform 1)chromosome CDS1007212 1011 - 0.25816
ctaB SAR11_0133 cytochrome c oxidase assembly factorchromosome CDS140067 867 - 0.307958
ctaG SAR11_0131 Cytochrome c oxidase assembly protein CtaG/Cox11chromosome CDS139409 537 - 0.303538
dnaK SAR11_0368 Chaperone proteinchromosome CDS358894 1944 - 0.340021
dsbB SAR11_0420 Disulfide bond formation proteinchromosome CDS407365 501 - 0.239521
dys2 SAR11_0205 Deoxyhypusine synthase-like proteinchromosome CDS207050 1044 + 0.309387
ftsH SAR11_0601 metalloprotease FtsHchromosome CDS586081 1887 + 0.356121
grlA SAR11_1143 Glutaredoxinchromosome CDS1096970 333 + 0.306306
groEL SAR11_0162 60 kDa chaperoninchromosome CDS164576 1665 + 0.374174
groES SAR11_0161 10 kDa chaperoninchromosome CDS164262 291 + 0.353952
grpE SAR11_0369 GrpE protein (HSP-70 cofactor)chromosome CDS360900 453 - 0.278146
hflC SAR11_0007 probable integral membrane proteinasechromosome CDS6444 867 - 0.314879
hflK SAR11_0008 probable integral membrane proteinasechromosome CDS7310 1101 - 0.359673
hslU SAR11_0334 ATP-dependent proteasechromosome CDS328663 1368 + 0.309942
hslV SAR11_0333 ATP-dependent proteasechromosome CDS328148 516 + 0.348837
htrA SAR11_0005 probable periplasmic serine protease DO-like precursorchromosome CDS4835 1413 - 0.319887
ibpA SAR11_0181 heat shock protein achromosome CDS183448 447 + 0.310962
lon SAR11_0882 ATP-dependent protease Lachromosome CDS846722 2385 + 0.302725
msrB SAR11_0188 Peptide methionine sulfoxide reductasechromosome CDS188118 444 + 0.295045
osmC SAR11_1172 OsmC-like proteinchromosome CDS1125607 552 - 0.34058
pild SAR11_0065 Type II Secretion PilDchromosome CDS78561 765 + 0.262745
pmpA SAR11_0127 peroxisomal membrane protein a (pmp20)chromosome CDS136092 486 - 0.302469
ppiA SAR11_1331 peptidylprolyl cis-trans isomerase precursorchromosome CDS1266439 645 + 0.266667
ppiB SAR11_0987 peptidylprolyl isomerasechromosome CDS969517 480 + 0.333333
smpB SAR11_1061 smpB proteinchromosome CDS1028146 471 - 0.286624
sohB SAR11_0615 Peptidase family S49chromosome CDS601340 807 + 0.319703
sufB SAR11_0739 FeS assembly protein SufBchromosome CDS722987 1443 + 0.308385
sufC SAR11_0740 FeS assembly ATPase SufCchromosome CDS724429 735 + 0.280272
sufD SAR11_0741 FeS assembly protein sufDchromosome CDS725164 1245 + 0.243373
tig SAR11_0879 trigger factorchromosome CDS843226 1434 + 0.279637
tlpA SAR11_0416 thiol:disulfide interchange proteinchromosome CDS404807 516 + 0.253876
trxA SAR11_0484 thioredoxin 1chromosome CDS473875 318 + 0.339623
trxB SAR11_0077 thioredoxin reductasechromosome CDS91514 945 + 0.350265
trxB2 SAR11_0627 thioredoxin-disulfide reductasechromosome CDS615474 1017 + 0.294985
yfcG SAR11_0628 probable glutathione S-transferasechromosome CDS616487 627 + 0.291866
ygjD SAR11_0311 O-sialoglycoprotein endopeptidasechromosome CDS307618 1074 + 0.331471