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2024-04-29 04:43:38

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681

Number of genes found: 196

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Colwellia psychrerythraea 34H, 34H; BAA-681
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CPS_0805 putative glutathione S-transferasechromosome CDS821312 651 + 0.385561
NA CPS_0640 putative glutaredoxinchromosome CDS639049 228 + 0.399123
NA CPS_2131 peptidase, U32 familychromosome CDS2223465 996 + 0.434739
NA CPS_4394 serine proteasechromosome CDS4629427 765 - 0.39085
NA CPS_1473 putative flagellar basal-body P-ring formation protein FlgAchromosome CDS1514171 693 - 0.33189
NA CPS_2134 zinc metallopeptidase, M16 familychromosome CDS2227386 2907 + 0.368421
NA CPS_2006 glutathione peroxidase family proteinchromosome CDS2077017 483 - 0.327122
NA CPS_4599 thioredoxin family proteinchromosome CDS4854184 477 + 0.375262
NA CPS_1552 conserved hypothetical proteinchromosome CDS1595726 621 - 0.363929
NA CPS_5006 conserved hypothetical proteinchromosome CDS5322377 1173 + 0.393862
NA CPS_2764 arginine-tRNA-protein transferasechromosome CDS2878974 762 + 0.366142
NA CPS_1905 glutathione S-transferase family proteinchromosome CDS1965445 768 - 0.378906
NA CPS_3634 conserved hypothetical proteinchromosome CDS3775439 375 - 0.413333
NA CPS_4837 SPFH domain/Band 7 domain proteinchromosome CDS5127860 978 - 0.40593
NA CPS_1798 ATP-dependent peptidase, M41 familychromosome CDS1844352 3855 + 0.374578
NA CPS_0754 alkaline serine protease, subtilase familychromosome CDS758752 1704 + 0.401408
NA CPS_2700 dsbA-like thioredoxin domain proteinchromosome CDS2816715 642 - 0.4081
NA CPS_0230 cytochrome oxidase assembly proteinchromosome CDS232511 1062 - 0.390772
NA CPS_1910 glutathione S-transferase family proteinchromosome CDS1969897 606 + 0.374587
NA CPS_4149 conserved hypothetical proteinchromosome CDS4363617 273 + 0.351648
NA CPS_3335 serine protease, subtilase familychromosome CDS3457409 2952 + 0.49729
NA CPS_1724 putative ATP-dependent protease LAchromosome CDS1771775 2409 + 0.386467
NA CPS_1339 DnaJ domain proteinchromosome CDS1377034 261 + 0.360153
NA CPS_3396 putative thioredoxinchromosome CDS3525019 315 - 0.368254
NA CPS_0111 conserved hypothetical proteinchromosome CDS118108 540 - 0.383333
NA CPS_0751 cold-active alkaline serine proteasechromosome CDS753796 2370 - 0.419409
NA CPS_4725 conserved hypothetical proteinchromosome CDS5000304 1191 - 0.415617
NA CPS_2132 conserved hypothetical proteinchromosome CDS2224526 882 + 0.420635
NA CPS_0280 putative xanthine dehydrogenase accessory factorchromosome CDS284102 1044 - 0.400383
NA CPS_0813 thioredoxinchromosome CDS830608 330 - 0.4
NA CPS_0220 HesB-like domain/NifU-like domain proteinchromosome CDS227552 579 + 0.405872
NA CPS_2509 putative thiol:disulfide interchange proteinchromosome CDS2617774 498 + 0.317269
NA CPS_0829 glutaredoxinchromosome CDS842614 243 - 0.36214
NA CPS_3579 antioxidant, AhpC/TSA familychromosome CDS3717211 687 + 0.369723
NA CPS_4399 conserved hypothetical proteinchromosome CDS4634838 852 - 0.374413
NA CPS_2436 putative glutathione S-transferasechromosome CDS2558954 630 - 0.390476
NA CPS_4143 trypsin family proteinchromosome CDS4358942 1050 - 0.380952
NA CPS_0994 hypothetical proteinchromosome CDS1011619 936 - 0.379274
NA CPS_3278 conserved hypothetical proteinchromosome CDS3408216 273 - 0.391941
NA CPS_0753 alkaline serine protease, subtilase familychromosome CDS756621 1830 + 0.419672
NA CPS_3068 putative peptide methionine sulfoxide reductase MsrAchromosome CDS3202018 543 - 0.373849
NA CPS_2252 putative lipoproteinchromosome CDS2351728 417 - 0.359712
NA CPS_2871 cold-active alkaline serine proteasechromosome CDS3002973 2370 - 0.421519
NA CPS_0631 OsmC family proteinchromosome CDS628528 405 - 0.437037
NA CPS_1185 putative glycoprotease family proteinchromosome CDS1212677 720 + 0.438889
NA CPS_1156 glutathione-S-transferase domain proteinchromosome CDS1179699 651 + 0.394777
NA CPS_0827 putative glutaredoxinchromosome CDS841106 270 - 0.359259
NA CPS_1668 glutathione S-transferase family proteinchromosome CDS1717534 768 - 0.369792
NA CPS_1775 conserved hypothetical proteinchromosome CDS1818242 984 + 0.379065
NA CPS_2947 conserved hypothetical proteinchromosome CDS3089745 681 - 0.350954
NA CPS_1795 ATP-dependent peptidase, M41 familychromosome CDS1836529 3906 + 0.346646
NA CPS_3137 OsmC family proteinchromosome CDS3270751 396 + 0.348485
NA CPS_1052 peptidase, M48 familychromosome CDS1078012 813 + 0.414514
NA CPS_4239 conserved hypothetical proteinchromosome CDS4466455 720 - 0.369444
NA CPS_3356 redox-active disulfide protein 2chromosome CDS3483238 237 - 0.35443
NA CPS_1105 putative DNA repair protein RadAchromosome CDS1126450 1389 - 0.411087
NA CPS_2492 conserved hypothetical proteinchromosome CDS2608449 561 + 0.324421
NA CPS_1155 conserved hypothetical proteinchromosome CDS1177152 2352 - 0.375425
NA CPS_0788 thermostable serine protease, subtilase familychromosome CDS807552 1821 + 0.419001
NA CPS_2701 disulfide bond formation protein, DsbB familychromosome CDS2817668 465 - 0.378495
NA CPS_1506 flagellar protein FliJchromosome CDS1548916 444 + 0.391892
NA CPS_0141 antioxidant, AhpC/Tsa familychromosome CDS149335 474 + 0.415612
NA CPS_0255 isoprenylcysteine carboxyl methyltransferase family proteinchromosome CDS259660 462 + 0.387446
NA CPS_2861 putative membrane proteinchromosome CDS2989286 627 - 0.342903
NA CPS_1038 putative cytochromre c biogenesis proteinchromosome CDS1064083 1299 + 0.381832
NA CPS_3155 zinc metallopeptidase, M16 familychromosome CDS3282599 2811 + 0.373533
NA CPS_4389 glutaredoxinchromosome CDS4624648 261 - 0.340996
NA CPS_4862 putative membrane proteinchromosome CDS5156388 699 - 0.376252
NA CPS_2863 putative lignin beta-etherasechromosome CDS2990878 669 + 0.351271
NA CPS_4835 putative heat shock protein 70 family proteinchromosome CDS5125827 1359 + 0.415011
NA CPS_1835 serine protease, trypsin familychromosome CDS1886095 1983 + 0.392335
NA CPS_0170 putative glutathione S-transferasechromosome CDS179683 648 - 0.37963
NA CPS_0093 hypothetical proteinchromosome CDS98614 621 - 0.381643
NA CPS_1329 peptidyl-prolyl cis-trans isomerase, cyclophilin-typechromosome CDS1366479 660 - 0.392424
NA CPS_2412 glutaredoxin family proteinchromosome CDS2523900 231 + 0.380952
NA CPS_2980 ABC transporter, ATP-binding/permease proteinchromosome CDS3116997 1809 - 0.385849
NA CPS_3495 conserved hypothetical proteinchromosome CDS3631684 840 - 0.361905
NA CPS_3456 SPFH domain/Band 7 family proteinchromosome CDS3590266 846 - 0.390071
NA CPS_2405 hypothetical proteinchromosome CDS2518707 300 + 0.34
NA CPS_1440 neutral zinc metallopeptidase, M13 familychromosome CDS1480090 2064 - 0.40407
NA CPS_4343 thioredoxin domain proteinchromosome CDS4575901 843 + 0.377224
NA CPS_2790 putative electron transfer proteinchromosome CDS2911186 555 - 0.369369
NA CPS_0482 serine proteasechromosome CDS483894 1272 - 0.382862
NA CPS_2883 radical SAM domain proteinchromosome CDS3018684 669 - 0.403587
NA CPS_2557 putative heme-binding proteinchromosome CDS2659432 432 + 0.372685
NA CPS_3475 glutaredoxin, homologchromosome CDS3613358 351 - 0.373219
NA CPS_2673 putative glutathione S-transferasechromosome CDS2785388 612 - 0.406863
NA CPS_1923 pyridine nucleotide-disulfide oxidoreductasechromosome CDS1980576 1050 + 0.401905
NA CPS_0752 hypothetical proteinchromosome CDS756376 249 + 0.321285
NA CPS_4627 serine protease, trypsin familychromosome CDS4888098 2109 + 0.404457
NA CPS_2749 putative glutathione S-transferasechromosome CDS2864079 651 - 0.330261
NA CPS_0889 putative transcriptional regulatorchromosome CDS895845 243 - 0.374486
NA CPS_3119 putative lipoproteinchromosome CDS3260710 309 + 0.391586
NA CPS_0258 AhpC/TSA family proteinchromosome CDS262232 588 - 0.343537
NA CPS_2495 putative glutathione S-transferasechromosome CDS2609672 615 + 0.35122
NA CPS_3312 glutathione S-transferase family proteinchromosome CDS3434841 897 + 0.424749
NA CPS_4968 peptidyl-prolyl cis-trans isomerase, cyclophilin-typechromosome CDS5278229 912 - 0.407895
NA CPS_2684 protein of unknown functionchromosome CDS2792509 1365 + 0.408791
NA CPS_4355 peroxiredoxin/glutaredoxin family proteinchromosome CDS4588030 729 + 0.381344
NA CPS_3069 peptide methionine sulfoxide reductase thioredoxin domain proteinchromosome CDS3202596 501 - 0.411178
NA CPS_3822 putative thioredoxinchromosome CDS3989861 495 - 0.341414
NA CPS_2601 antioxidant, AhpC/Tsa familychromosome CDS2704653 561 + 0.374332
NA CPS_4923 oxidoreductase, 2OG-Fe(II) oxygenase familychromosome CDS5213562 684 - 0.403509
NA CPS_3909 serine protease, subtilase familychromosome CDS4081078 3129 + 0.411314
NA CPS_1444 hypothetical proteinchromosome CDS1484529 831 - 0.362214
NA CPS_3848 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS4017528 474 - 0.377637
NA CPS_1413 conserved hypothetical proteinchromosome CDS1453728 630 + 0.401587
NA CPS_2685 SPFH domain/band 7 family domain proteinchromosome CDS2793857 786 + 0.370229
NA CPS_4836 conserved hypothetical proteinchromosome CDS5127323 459 - 0.372549
NA CPS_3474 antioxidant, AhpC/Tsa familychromosome CDS3612600 606 - 0.394389
NA CPS_2140 putative lipoproteinchromosome CDS2241004 525 + 0.379048
NA CPS_1880 cysteine ABC transporter, ATP-binding/permease proteinchromosome CDS1937173 1800 + 0.398889
NA CPS_4866 putative xanthine dehydrogenase accessory protein XdhCchromosome CDS5161479 897 + 0.42252
aat CPS_2763 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS2878179 726 + 0.385675
ahpC CPS_4717 alkyl hydroperoxide reductase, subunit Cchromosome CDS4993714 570 - 0.398246
ahpF CPS_4716 alkyl hydroperoxide reductase, F subunitchromosome CDS4991903 1572 - 0.416031
bcp CPS_3186 bacterioferritin comigratory proteinchromosome CDS3317012 477 + 0.350105
ccmA CPS_1034 heme exporter protein CcmAchromosome CDS1059931 660 - 0.371212
ccmB CPS_1033 heme exporter protein CcmBchromosome CDS1059078 816 - 0.414216
ccmC CPS_1032 heme exporter protein CcmCchromosome CDS1058332 747 - 0.424364
ccmE CPS_1030 cytochrome c-type biogenesis protein CcmEchromosome CDS1057503 537 - 0.411546
ccmF CPS_1035 cytochrome c-type biogenesis protein CcmFchromosome CDS1060926 2040 + 0.408824
ccmH CPS_1037 cytochrome c-type biogenesis protein CcmHchromosome CDS1063518 468 + 0.363248
ccoN CPS_1995 cytochrome c oxidase, cbb3-type, subunit Ichromosome CDS2063820 1425 - 0.408421
clpA CPS_2893 ATP-dependent Clp protease, ATP-binding subunit ClpAchromosome CDS3025899 2259 - 0.377601
clpB CPS_3913 ATP-dependent chaperone protein ClpBchromosome CDS4086397 2586 - 0.400232
clpP CPS_3785 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS3950580 663 - 0.368024
clpX CPS_3784 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS3949230 1275 - 0.383529
comM CPS_4841 competence protein ComMchromosome CDS5132247 1530 - 0.450327
ctaG CPS_0234 cytochrome c oxidase assembly proteinchromosome CDS235998 570 - 0.373684
cydD CPS_1879 ABC transporter, ATP-binding/permease protein CydDchromosome CDS1935398 1779 + 0.400225
cyoE CPS_0229 protoheme IX farnesyltransferasechromosome CDS231565 954 - 0.390985
degP CPS_4346 serine protease DegPchromosome CDS4578975 1380 + 0.401449
degS CPS_4347 serine protease DegSchromosome CDS4580492 1071 + 0.387488
djlA CPS_4522 DnaJ-like protein DjlAchromosome CDS4773502 828 - 0.380435
dnaJ CPS_3820 chaperone protein DnaJchromosome CDS3986369 1137 - 0.422164
dnaK1 CPS_1313 chaperone protein DnaKchromosome CDS1352423 1902 - 0.399054
dnaK2 CPS_3821 chaperone protein DnaKchromosome CDS3987727 1917 - 0.401669
dsbA CPS_4348 thiol:disulfide interchange protein DsbAchromosome CDS4581706 645 - 0.342636
dsbB CPS_3513 disulfide bond formation protein Bchromosome CDS3652656 519 + 0.406551
dsbC CPS_4095 thiol:disulfide interchange protein DsbCchromosome CDS4310099 795 - 0.377358
dsbD CPS_0953 thiol:disulfide interchange protein DsbDchromosome CDS961255 1827 - 0.37329
dsbE CPS_1036 thiol:disulfide interchange protein DsbEchromosome CDS1062968 549 + 0.398907
fkbP CPS_1184 FKBP-type peptidyl-prolyl cis-trans isomerase FkbPchromosome CDS1212065 444 + 0.378378
fklB CPS_3462 FKBP-type peptidyl-prolyl cis-trans isomerase FklBchromosome CDS3598054 642 - 0.397196
fkpA CPS_0437 FKBP-type peptidyl-prolyl cis-trans isomerase FkpAchromosome CDS438097 768 + 0.401042
flgJ CPS_1485 flagellar protein FlgJchromosome CDS1525047 1140 + 0.380702
fliS CPS_1496 flagellar protein FliSchromosome CDS1537508 399 - 0.37594
ftsH CPS_3452 ATP-dependent metalloprotease FtsHchromosome CDS3586434 1983 - 0.411498
gcp CPS_4338 O-sialoglycoprotein endopeptidasechromosome CDS4572004 1050 + 0.438095
glnD CPS_1549 protein-P-II uridylyltransferasechromosome CDS1591907 2637 - 0.375806
glnE CPS_4185 glutamate-ammonia-ligase adenylyltransferasechromosome CDS4405126 2859 - 0.395243
groEL CPS_0957 chaperone protein GroELchromosome CDS964651 1647 + 0.414693
groES CPS_0956 chaperone protein GroESchromosome CDS964180 291 + 0.388316
grpE CPS_3823 co-chaperone GrpEchromosome CDS3990524 630 - 0.385714
hflC CPS_0328 HflC proteinchromosome CDS339292 888 + 0.378378
hflK CPS_0327 HflK proteinchromosome CDS338140 1149 + 0.386423
hscA CPS_1136 chaperone protein HscAchromosome CDS1157013 1863 + 0.406334
hscB CPS_1135 co-chaperone Hsc20chromosome CDS1156396 528 + 0.36553
hslO CPS_4594 chaperone protein HslOchromosome CDS4848432 873 + 0.386025
hslU CPS_4370 heat shock protein HslVU, ATPase subunit HslUchromosome CDS4601329 1332 + 0.394144
hslV CPS_4369 ATP-dependent protease HslVU, HslV subunitchromosome CDS4600735 519 + 0.416185
htpG CPS_3901 chaperone protein HtpGchromosome CDS4071788 1962 - 0.378186
ibpA CPS_3580 chaperone protein IbpAchromosome CDS3718197 471 + 0.384289
lon CPS_3783 ATP-dependent protease Lachromosome CDS3946638 2349 - 0.389953
maiA CPS_3762 maleylacetoacetate isomerasechromosome CDS3927032 639 - 0.383412
msrA1 CPS_2638 peptide methionine sulfoxide reductase MsrAchromosome CDS2742493 522 + 0.386973
msrA2 CPS_4817 peptide methionine sulfoxide reductase MsrAchromosome CDS5110416 555 - 0.38018
msrAB CPS_3367 peptide methionine sulfoxide reductase MsrA/MsrBchromosome CDS3494151 1371 + 0.374179
msrB1 CPS_2342 methionine-R-sulfoxide reductasechromosome CDS2441234 378 + 0.388889
msrB2 CPS_3070 methionine-R-sulfoxide reductasechromosome CDS3203093 453 - 0.397351
ohr CPS_3330 organic hydroperoxide resistance proteinchromosome CDS3450668 423 - 0.44208
pcm CPS_1076 protein-L-isoaspartate O-methyltransferasechromosome CDS1096248 651 + 0.437788
pepO CPS_1170 metalloendopeptidase PepOchromosome CDS1191506 2064 - 0.388081
pilD CPS_4449 type 4 prepilin-like proteins leader peptide processing enzyme PilDchromosome CDS4687011 906 + 0.35872
ppiA1 CPS_0643 peptidyl-prolyl cis-trans isomerase Achromosome CDS641366 873 - 0.383734
ppiA2 CPS_0709 peptidyl-prolyl cis-trans isomerase Achromosome CDS712267 588 - 0.37585
ppiB CPS_3793 peptidyl-prolyl cis-trans isomerase Bchromosome CDS3956390 492 + 0.376016
ppiC1 CPS_0749 peptidyl-prolyl cis-trans isomerase Cchromosome CDS752366 279 + 0.379928
ppiC2 CPS_3482 peptidyl-prolyl cis-trans isomerase Cchromosome CDS3619671 279 - 0.362007
ppiC3 CPS_3636 peptidyl-prolyl cis-trans isomerase Cchromosome CDS3777280 279 + 0.394265
ppiD CPS_3780 peptidyl-prolyl cis-trans isomerase Dchromosome CDS3943939 1917 - 0.378195
sirA CPS_0010 sirA proteinchromosome CDS11579 246 - 0.382114
slyD1 CPS_2846 FKBP-type peptidyl-prolyl cis-trans isomerase SlyDchromosome CDS2973443 504 - 0.394841
slyD2 CPS_4133 FKBP-type peptidyl-prolyl cis-trans isomerase SlyDchromosome CDS4348843 492 + 0.412602
smpB CPS_3829 SsrA-binding proteinchromosome CDS3996097 489 + 0.364008
sohB CPS_1193 sohB protein, peptidase U7 familychromosome CDS1220779 1050 + 0.365714
sppA CPS_2585 signal peptide peptidase SppA, 67K typechromosome CDS2688624 1914 - 0.3814
sspA CPS_4437 stringent starvation protein Achromosome CDS4676064 642 - 0.384735
surA CPS_4524 peptidyl-prolyl cis-trans isomerase SurAchromosome CDS4777122 1302 + 0.373272
tig CPS_3786 trigger factorchromosome CDS3951354 1308 - 0.37156
trx1 CPS_0175 thioredoxinchromosome CDS184024 327 + 0.351682
trx2 CPS_2236 thioredoxinchromosome CDS2336616 435 - 0.402299
trx3 CPS_4281 thioredoxinchromosome CDS4513537 315 + 0.380952
trxB CPS_2762 thioredoxin-disulfide reductasechromosome CDS2877151 948 + 0.408228
yegQ CPS_1202 peptidase, U32 familychromosome CDS1233435 1392 - 0.389368