Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Psychrobacter arcticum 273-4, 273-4
Number of genes found: 91
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| Psychrobacter arcticum 273-4, 273-4 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Psyc_0769 | probable Peroxiredoxin | SubName: Full=Probable Peroxiredoxin; | chromosome | CDS | 920662 | 501 | - | 0.41517 |
| NA | Psyc_2090 | possible peptidyl-prolyl isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 2570676 | 732 | - | 0.423497 |
| NA | Psyc_1004 | possible phage Peptidase U7 | SubName: Full=Protein C, Serine peptidase, MEROPS family S49; EC=3.4.21.69; | chromosome | CDS | 1197089 | 1209 | + | 0.468156 |
| NA | Psyc_0869 | possible AAA ATPase family protein | SubName: Full=Possible AAA ATPase family protein; | chromosome | CDS | 1036105 | 1059 | + | 0.358829 |
| NA | Psyc_0857 | peptidylprolyl isomerase | SubName: Full=Peptidylprolyl isomerase; EC=5.2.1.8; | chromosome | CDS | 1024993 | 279 | + | 0.44086 |
| NA | Psyc_0718 | conserved hypothetical protein | RecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; | chromosome | CDS | 855959 | 426 | + | 0.474178 |
| NA | Psyc_0302 | possible heat shock protein, Hsp33 | SubName: Full=Possible heat shock protein, Hsp33; | chromosome | CDS | 371127 | 981 | - | 0.46789 |
| NA | Psyc_0365 | probable thioredoxin protein | SubName: Full=Probable thioredoxin protein; | chromosome | CDS | 454611 | 564 | - | 0.404255 |
| NA | Psyc_1706 | possible metal (zinc) dependent glycoprotease, M22 family | SubName: Full=Possible metal (Zinc) dependent glycoprotease, M22 family; | chromosome | CDS | 2107461 | 684 | - | 0.467836 |
| NA | Psyc_0736 | probable radical activating enzyme | RecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; | chromosome | CDS | 878072 | 735 | - | 0.480272 |
| NA | Psyc_1520 | possible peptidylprolyl isomerase | RecName: Full=Chaperone SurA; AltName: Full=Peptidyl-prolyl cis-trans isomerase SurA; AltName: Full=Rotamase SurA; Flags: Precursor; | chromosome | CDS | 1856615 | 1398 | + | 0.462089 |
| NA | Psyc_0842 | probable glutathione S-transferase | SubName: Full=Probable glutathione S-transferase; | chromosome | CDS | 1010532 | 657 | + | 0.442922 |
| NA | Psyc_2128 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2627328 | 498 | - | 0.459839 |
| NA | Psyc_0562 | possible oxygenase | SubName: Full=Possible oxygenase; | chromosome | CDS | 656824 | 759 | - | 0.411067 |
| NA | Psyc_1579 | probable IMP dehydrogenase/GMP reductase | SubName: Full=Probable IMP dehydrogenase/GMP reductase; | chromosome | CDS | 1935136 | 963 | - | 0.429907 |
| NA | Psyc_2133 | heat shock protein GrpE, hsp70 family | RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; | chromosome | CDS | 2633587 | 600 | - | 0.433333 |
| NA | Psyc_0696 | putative alkyl hydroperoxide reductase | SubName: Full=1-Cys peroxiredoxin; EC=1.11.1.15; | chromosome | CDS | 827474 | 639 | + | 0.455399 |
| NA | Psyc_1911 | conserved hypothetical protein | RecName: Full=Fe/S biogenesis protein NfuA; | chromosome | CDS | 2359205 | 684 | - | 0.454678 |
| NA | Psyc_0039 | probable heat shock protein DnaJ | SubName: Full=Probable heat shock protein DnaJ; | chromosome | CDS | 44824 | 999 | + | 0.453453 |
| NA | Psyc_1542 | probable glutathione S-transferase | SubName: Full=Probable glutathione S-transferase; | chromosome | CDS | 1886263 | 669 | - | 0.431988 |
| NA | Psyc_0358 | probable peptidyl-prolyl cis-trans isomerase protein, FKBP-type | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 445651 | 498 | - | 0.471888 |
| NA | Psyc_1242 | probable glutaredoxin-related protein | RecName: Full=Glutaredoxin; | chromosome | CDS | 1491351 | 351 | - | 0.410256 |
| NA | Psyc_1322 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1592572 | 2856 | + | 0.447829 |
| NA | Psyc_2127 | probable band 7 protein | SubName: Full=SPFH domain, Band 7 family protein; | chromosome | CDS | 2626452 | 861 | - | 0.455285 |
| NA | Psyc_0087 | conserved hypothetical protein | RecName: Full=Probable Fe(2+)-trafficking protein; | chromosome | CDS | 100903 | 291 | - | 0.43299 |
| NA | Psyc_1354 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1631785 | 204 | + | 0.421569 |
| NA | Psyc_1971 | conserved hypothetical protein | RecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; | chromosome | CDS | 2430663 | 1401 | + | 0.450393 |
| NA | Psyc_1043 | probable peptide methionine sulfoxide reductase | SubName: Full=Probable peptide methionine sulfoxide reductase; EC=1.8.4.11; | chromosome | CDS | 1234922 | 1251 | + | 0.441247 |
| NA | Psyc_0054 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 61869 | 261 | - | 0.402299 |
| NA | Psyc_1783 | probable zinc metallopeptidases, family M48 | SubName: Full=Probable zinc metallopeptidase, family M48; | chromosome | CDS | 2196414 | 813 | + | 0.471095 |
| NA | Psyc_1789 | probable thioredoxin | SubName: Full=Probable thioredoxin; | chromosome | CDS | 2200298 | 435 | - | 0.462069 |
| NA | Psyc_1649 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2040143 | 309 | + | 0.449838 |
| NA | Psyc_0025 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 28179 | 1086 | + | 0.45488 |
| NA | Psyc_2006 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2472117 | 414 | - | 0.442029 |
| NA | Psyc_0027 | probable chaperone protein dnaJ | RecName: Full=Chaperone protein DnaJ; | chromosome | CDS | 30543 | 1125 | + | 0.469333 |
| NA | Psyc_0697 | probable glutathione S-transferase | SubName: Full=Probable glutathione S-transferase; | chromosome | CDS | 828401 | 663 | + | 0.434389 |
| NA | Psyc_1950 | probable peptide methionine sulfoxide reductase | RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase; | chromosome | CDS | 2403309 | 522 | + | 0.415709 |
| NA | Psyc_1080 | glutathione S-transferase family | SubName: Full=Glutathione S-transferase family; | chromosome | CDS | 1289068 | 843 | + | 0.457888 |
| NA | Psyc_2125 | probable magnesium chelatase-related protein | SubName: Full=Probable magnesium chelatase-related protein; | chromosome | CDS | 2622772 | 1551 | - | 0.471309 |
| NA | Psyc_1940 | probable peptidylprolyl isomerase, FKBP-type | RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; | chromosome | CDS | 2390857 | 1344 | + | 0.431548 |
| NA | Psyc_0566 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 667795 | 411 | + | 0.396594 |
| NA | Psyc_0208 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 247635 | 468 | - | 0.42094 |
| NA | Psyc_0552 | putative Chaperonin HSP10 | RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; | chromosome | CDS | 646903 | 291 | + | 0.439863 |
| NA | Psyc_1555 | probable glutaredoxin | SubName: Full=Probable glutaredoxin; | chromosome | CDS | 1905668 | 264 | + | 0.420455 |
| NA | Psyc_0778 | putative cytochrome c oxidase cbb3-type | SubName: Full=Putative cytochrome c oxidase cbb3-type; EC=1.9.3.1; | chromosome | CDS | 928971 | 1482 | - | 0.440621 |
| NA | Psyc_0553 | putative Chaperonin HSP60 family | RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; | chromosome | CDS | 647289 | 1641 | + | 0.45582 |
| NA | Psyc_1473 | possible PpiC-type peptidyl-prolyl cis-trans isomerase | SubName: Full=Possible PpiC-type peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 1790558 | 1875 | - | 0.445867 |
| NA | Psyc_0120 | conserved hypothetical protein | RecName: Full=Thiol:disulfide interchange protein; | chromosome | CDS | 142426 | 621 | - | 0.428341 |
| NA | Psyc_0609 | possible peptidyl-prolyl cis-trans isomerase | SubName: Full=Possible peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 729309 | 1032 | + | 0.428295 |
| NA | Psyc_0387 | probable leucyl/phenylalanyl-tRNA--protein transferase | RecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; | chromosome | CDS | 482733 | 807 | - | 0.454771 |
| NA | Psyc_0698 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 829537 | 900 | + | 0.414444 |
| ahpC | Psyc_1797 | putative alkyl hydroperoxide reductase, subunit C | SubName: Full=Putative alkyl hydroperoxide reductase, subunit C; | chromosome | CDS | 2208259 | 567 | - | 0.440917 |
| ahpF | Psyc_1795 | probable alkyl hydroperoxide reductase subunit F | SubName: Full=Probable alkyl hydroperoxide reductase subunit F; | chromosome | CDS | 2205524 | 1578 | - | 0.434094 |
| algW | Psyc_1270 | probable serine protease | SubName: Full=Probable serine protease; | chromosome | CDS | 1527217 | 1329 | - | 0.490594 |
| ccmA | Psyc_1829 | ABC exporter, ATPase subunit CcmA | SubName: Full=ABC exporter, ATPase subunit CcmA; | chromosome | CDS | 2247671 | 630 | - | 0.452381 |
| ccmB | Psyc_1828 | ABC exporter, inner membrane subunit CcmB | RecName: Full=Heme exporter protein B; | chromosome | CDS | 2246866 | 738 | - | 0.47832 |
| ccmC | Psyc_1827 | heme exporter, subunit CcmC | SubName: Full=Heme exporter, subunit CcmC; | chromosome | CDS | 2245847 | 789 | - | 0.462611 |
| ccmE | Psyc_1825 | cytochrome c-type biogenesis protein, periplasmic heme chaperone CcmE | RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE; | chromosome | CDS | 2244850 | 501 | - | 0.459082 |
| ccmF | Psyc_1561 | probable cytochrome c-type biogenesis protein | SubName: Full=Probable cytochrome c-type biogenesis protein; | chromosome | CDS | 1910299 | 2046 | - | 0.47263 |
| ccmH | Psyc_1559 | probable cytochrome C-type biogenesis protein | SubName: Full=Probable cytochrome C-type biogenesis protein; | chromosome | CDS | 1909072 | 579 | - | 0.442142 |
| clpA | Psyc_1498 | probable ATP-dependent Clp protease | SubName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA; EC=3.4.21.92; | chromosome | CDS | 1817787 | 2550 | - | 0.435294 |
| clpB | Psyc_0823 | putative chaperonin clpA/B | SubName: Full=Putative chaperonin clpA/B; | chromosome | CDS | 988604 | 2598 | + | 0.464203 |
| clpP | Psyc_1941 | putative ATP-dependent of ClpP protease, proteolytic subunit | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 2392628 | 678 | + | 0.466077 |
| clpX | Psyc_1942 | putative ATP-dependent Clp protease | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; | chromosome | CDS | 2393438 | 1275 | + | 0.449412 |
| cycH | Psyc_1558 | possible cytochrome c-type biogenesis protein | SubName: Full=Possible cytochrome c-type biogenesis protein; | chromosome | CDS | 1907795 | 1281 | - | 0.460578 |
| cysT | Psyc_1072 | ABC sulfate/thiosulfate transporter, inner membrane subunit CysT | SubName: Full=ABC sulfate/thiosulfate transporter, inner membrane subunit CysT; | chromosome | CDS | 1282559 | 885 | + | 0.472316 |
| dnaK | Psyc_2132 | chaperone protein dnaK | RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; | chromosome | CDS | 2631349 | 1944 | - | 0.436728 |
| dsbB | Psyc_0034 | possible disulfide bond formation protein | RecName: Full=Disulfide bond formation protein B; AltName: Full=Disulfide oxidoreductase; | chromosome | CDS | 38341 | 531 | - | 0.451977 |
| dsbC | Psyc_0254 | possible thiol:disulfide interchange protein | SubName: Full=Possible thiol:disulfide interchange protein; EC=5.3.4.1; | chromosome | CDS | 304875 | 858 | - | 0.47669 |
| dsbE | Psyc_1560 | probable periplasmic protein thiol:disulfide oxidoreductase DsbE | SubName: Full=Probable periplasmic protein thiol:disulfide oxidoreductase DsbE; | chromosome | CDS | 1909647 | 651 | - | 0.442396 |
| ftsH | Psyc_1738 | putative ATP-dependent metalloprotease FtsH | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome | CDS | 2141297 | 1887 | - | 0.45522 |
| glnD | Psyc_0395 | probable protein-P-II uridylyltransferase | RecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; Includes: RecName: Full=[Protein-PII] uridylyltransferase; Short=PII uridylyltransferase; Short=UTase; EC=2.7.7.59; Includes: RecName: Full=[Protein-PII]-UMP uridylyl-removing enzyme; Short=UR; EC=3.1.4.-; | chromosome | CDS | 495044 | 2748 | - | 0.449418 |
| glnE | Psyc_1217 | glutamate-ammonia ligase adenylyltransferase | RecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthase adenylyltransferase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; | chromosome | CDS | 1459973 | 2850 | - | 0.46386 |
| gst | Psyc_0418 | probable glutathione S-transferase | SubName: Full=Probable glutathione S-transferase; | chromosome | CDS | 523115 | 681 | + | 0.441997 |
| hscA | Psyc_1481 | heat shock protein Hsp70 | RecName: Full=Chaperone protein HscA homolog; | chromosome | CDS | 1798560 | 1878 | + | 0.465921 |
| hscB | Psyc_1480 | probable co-chaperone Hsc20 heat shock proteins related | RecName: Full=Co-chaperone protein HscB homolog; | chromosome | CDS | 1797725 | 582 | + | 0.412371 |
| htpG | Psyc_1719 | probable chaperone protein htpG (Hsp90) | RecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; | chromosome | CDS | 2118369 | 1971 | - | 0.437341 |
| lon | Psyc_1659 | ATP-dependent protease La | RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; | chromosome | CDS | 2052973 | 2628 | + | 0.454338 |
| mucD | Psyc_0147 | possible serine protease | SubName: Full=Possible serine protease; | chromosome | CDS | 175485 | 1458 | + | 0.478052 |
| ohrA | Psyc_0379 | probable organic hydroperoxide resistance protein | SubName: Full=Probable organic hydroperoxide resistance protein; | chromosome | CDS | 472843 | 414 | - | 0.410628 |
| pilD | Psyc_0062 | pilin secretion/fimbrial assembly signal peptidase, PilD | RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; | chromosome | CDS | 68477 | 900 | - | 0.424444 |
| ppiB | Psyc_0693 | peptidyl-prolyl cis-trans isomerase, cyclophilin type | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 823547 | 516 | - | 0.426357 |
| radA | Psyc_0927 | putative DNA repair protein radA | RecName: Full=DNA repair protein radA; | chromosome | CDS | 1109596 | 1449 | + | 0.483092 |
| slyD | Psyc_0283 | putative peptidyl-prolyl cis-trans isomerase, FKBP-type | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 345101 | 486 | - | 0.465021 |
| smpB | Psyc_0325 | small stable RNA-binding protein, SsrA family | RecName: Full=SsrA-binding protein; | chromosome | CDS | 404366 | 477 | - | 0.408805 |
| sohB | Psyc_1202 | probable serine peptidase (U7 family) protein | SubName: Full=Inner membrane peptidase, Serine peptidase, MEROPS family S49; | chromosome | CDS | 1443136 | 975 | - | 0.429744 |
| sppA | Psyc_0786 | probable signal peptide peptidase | SubName: Full=Probable signal peptide peptidase; | chromosome | CDS | 939936 | 1056 | + | 0.447917 |
| sspA | Psyc_1423 | possible stringent starvation protein A | SubName: Full=Possible stringent starvation protein A; | chromosome | CDS | 1722800 | 615 | + | 0.442276 |
| trxA | Psyc_1989 | putative thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 2455356 | 327 | + | 0.400612 |
| trxB | Psyc_0388 | putative thioredoxin reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome | CDS | 483610 | 1023 | - | 0.453568 |
| ygjD | Psyc_0214 | probable O-sialoglycoprotein endopeptidase protein | RecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; | chromosome | CDS | 252902 | 1050 | + | 0.485714 |
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