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2024-05-05 01:32:12

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Pseudomonas fluorescens Pf-5, Pf-5

Number of genes found: 191

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas fluorescens Pf-5, Pf-5
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PFL_3105 Aspartyl/Asparaginyl beta-hydroxylase familychromosome CDS3575891 900 - 0.588889
NA PFL_0827 dnaK proteinchromosome CDS954516 1917 + 0.582681
NA PFL_1453 conserved hypothetical proteinchromosome CDS1633705 240 + 0.625
NA PFL_0193 sulfate transport protein CysT PA0282chromosome CDS229850 819 + 0.641026
NA PFL_4182 thiol:disulfide interchange protein DsbDchromosome CDS4854985 1752 + 0.678082
NA PFL_5996 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS6816869 666 + 0.629129
NA PFL_4245 glutathione peroxidase family proteinchromosome CDS4942003 486 - 0.598765
NA PFL_1887 xanthine dehydrogenase accessory factor XdhC, putativechromosome CDS2101024 843 - 0.634638
NA PFL_4709 conserved hypothetical proteinchromosome CDS5441688 429 + 0.571096
NA PFL_5918 conserved hypothetical proteinchromosome CDS6727502 588 + 0.664966
NA PFL_4273 hypothetical proteinchromosome CDS4968830 468 + 0.589744
NA PFL_4586 glutathione S-transferasechromosome CDS5295394 633 + 0.633491
NA PFL_1102 thiol:disulfide interchange protein DsbCchromosome CDS1257709 732 + 0.622951
NA PFL_1642 flagellar protein FliJchromosome CDS1845673 450 + 0.648889
NA PFL_0279 Protein of unknown function (DUF785) superfamilychromosome CDS326176 483 - 0.627329
NA PFL_5333 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS6098134 618 - 0.631068
NA PFL_4162 organic radical activating enzyme family proteinchromosome CDS4831091 645 + 0.671318
NA PFL_3983 peptidyl-prolyl cis-trans isomerase Dchromosome CDS4599284 1872 - 0.597756
NA PFL_4483 flagellar basal-body P-ring formation protein FlgA, putativechromosome CDS5195438 762 + 0.594488
NA PFL_3394 alkyl hydroperoxide reductase, subunit Fchromosome CDS3915592 1566 - 0.614304
NA PFL_6022 Mg-chelatase subunits D/I family, ComM subfamily proteinchromosome CDS6840201 1494 + 0.684739
NA PFL_1859 Protein of unknown function (DUF785) familychromosome CDS2064600 591 - 0.626058
NA PFL_5353 conserved hypothetical proteinchromosome CDS6124130 576 + 0.637153
NA PFL_5915 oxidoreductase, 2OG-Fe(II) oxygenase familychromosome CDS6724772 708 - 0.612994
NA PFL_1809 ADP-ribosylglycohydrolase family proteinchromosome CDS2010422 999 + 0.678679
NA PFL_0357 Protein of unknown function (DUF495) superfamilychromosome CDS409175 273 - 0.593407
NA PFL_5647 survival protein SurAchromosome CDS6433105 1323 + 0.617536
NA PFL_1617 peptidoglycan hydrolase FlgJchromosome CDS1812712 1098 + 0.641166
NA PFL_4010 peptidase, U32 familychromosome CDS4625643 1326 + 0.647059
NA PFL_0437 heat shock protein HslVchromosome CDS500515 531 - 0.627119
NA PFL_4455 thioredoxin, putativechromosome CDS5165602 465 - 0.617204
NA PFL_2402 glutathione S-transferase domain proteinchromosome CDS2666188 633 - 0.679305
NA PFL_1058 conserved hypothetical proteinchromosome CDS1207739 825 + 0.660606
NA PFL_6194 SPFH domain / Band 7 family proteinchromosome CDS7031789 2091 - 0.656145
NA PFL_5232 chaperone protein HscCchromosome CDS5992718 1698 + 0.6596
NA PFL_2474 isoprenylcysteine carboxyl methyltransferase family proteinchromosome CDS2737437 660 - 0.660606
NA PFL_4324 thioredoxin domain protein, DsbA familychromosome CDS5029662 636 - 0.683962
NA PFL_4184 thiol:disulfide interchange protein DsbGchromosome CDS4857575 768 + 0.634115
NA PFL_4419 glutathione peroxidase family proteinchromosome CDS5129820 552 - 0.585145
NA PFL_1269 glutathione S-transferasechromosome CDS1441011 642 - 0.615265
NA PFL_0941 glutathione peroxidase family proteinchromosome CDS1084284 483 + 0.596273
NA PFL_1542 peptidyl-prolyl cis-trans isomerase Achromosome CDS1731791 564 - 0.620567
NA PFL_1996 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS2223871 1143 + 0.629921
NA PFL_2858 thiol peroxidasechromosome CDS3188065 501 + 0.642715
NA PFL_0790 hypothetical proteinchromosome CDS915565 486 - 0.644033
NA PFL_4860 glutaredoxin-related proteinchromosome CDS5602652 339 - 0.554572
NA PFL_5710 glutathione S-transferase domain proteinchromosome CDS6508415 615 + 0.668293
NA PFL_1732 OsmC-like protein superfamilychromosome CDS1938124 417 - 0.623501
NA PFL_1680 heme exporter protein CcmAchromosome CDS1883173 636 + 0.674528
NA PFL_1729 heat shock protein HtpGchromosome CDS1934381 1905 + 0.599475
NA PFL_0933 peptidase, S1C (protease Do) subfamilychromosome CDS1075110 1155 - 0.639827
NA PFL_4857 antioxidant, AhpC/Tsa familychromosome CDS5600644 603 - 0.587065
NA PFL_4356 conserved hypothetical proteinchromosome CDS5062226 450 + 0.6
NA PFL_4739 clp protease, putativechromosome CDS5477036 558 + 0.589606
NA PFL_5526 thioredoxin, putativechromosome CDS6307443 873 + 0.65063
NA PFL_1520 Aspartyl/Asparaginyl beta-hydroxylase familychromosome CDS1703639 939 + 0.628328
NA PFL_3914 peptidyl-prolyl cis-trans isomerase Bchromosome CDS4518552 504 + 0.56746
NA PFL_4990 glutathione S-transferase domain proteinchromosome CDS5751191 624 - 0.599359
NA PFL_0063 cytochrome c oxidase assembly protein, putativechromosome CDS62697 558 + 0.607527
NA PFL_0283 chaperonin, 33 kDachromosome CDS328924 903 + 0.636766
NA PFL_6206 glutathione S-transferasechromosome CDS7046781 630 - 0.673016
NA PFL_0085 thiol:disulfide interchange protein, DsbA familychromosome CDS83957 630 + 0.584127
NA PFL_4115 ADP-ribosylglycohydrolase family proteinchromosome CDS4775676 1323 + 0.684051
NA PFL_4216 membrane protein, putativechromosome CDS4905174 1419 + 0.661734
NA PFL_5672 coenzyme pqq synthesis protein fchromosome CDS6464699 2463 + 0.656922
NA PFL_4361 glutathione S-transferasechromosome CDS5066758 603 - 0.59204
NA PFL_2309 glutathione S-transferase domain proteinchromosome CDS2573739 639 + 0.685446
NA PFL_0311 thioredoxin domain protein, DsbA familychromosome CDS362489 696 + 0.673851
NA PFL_2827 PPIC-type PPIASE domain proteinchromosome CDS3151142 957 + 0.700104
NA PFL_5033 protoheme IX farnesyltransferasechromosome CDS5791323 888 - 0.595721
NA PFL_2399 membrane protein, putativechromosome CDS2664484 462 + 0.660173
NA PFL_5304 ClpB protein PA4542chromosome CDS6068808 2565 - 0.608967
NA PFL_1790 signal peptide peptidase SppA, 36K typechromosome CDS1994201 990 + 0.59697
NA PFL_2287 glutathione S-transferasechromosome CDS2548138 705 + 0.61844
NA PFL_5939 probable antioxidant protein PA3450chromosome CDS6750306 639 - 0.596244
NA PFL_4838 GroEL protein PA4385chromosome CDS5582414 1644 - 0.586375
NA PFL_0627 heat shock protein, Hsp70 familychromosome CDS734717 1266 - 0.64139
NA PFL_4226 conserved hypothetical proteinchromosome CDS4914382 237 - 0.649789
NA PFL_4485 FlgN protein superfamilychromosome CDS5196717 468 + 0.59188
NA PFL_0068 cytochrome oxidase assembly proteinchromosome CDS65763 1080 + 0.675926
NA PFL_1785 XdhC/CoxI family proteinchromosome CDS1986987 996 + 0.676707
NA PFL_3883 arginine-tRNA-protein transferase-related proteinchromosome CDS4481951 708 + 0.594633
NA PFL_4399 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS5108536 714 - 0.593838
NA PFL_0828 dnaJ proteinchromosome CDS956755 1125 + 0.616889
NA PFL_5319 probable fkbp-type 16 kd peptidyl-prolyl cis-trans isomerasechromosome CDS6084904 453 - 0.573951
NA PFL_5998 DsbB family protein, putativechromosome CDS6818261 582 - 0.634021
NA PFL_5714 Protein of unknown function (DUF785) familychromosome CDS6512815 660 - 0.624242
NA PFL_3579 peptidyl-prolyl cis-trans isomerase Cchromosome CDS4130274 276 + 0.608696
NA PFL_5949 conserved hypothetical proteinchromosome CDS6762712 450 + 0.646667
NA PFL_4272 conserved hypothetical proteinchromosome CDS4968478 387 - 0.578811
NA PFL_5618 OsmC/Ohr family proteinchromosome CDS6398748 582 - 0.579038
NA PFL_2060 heat-shock protein IbpAchromosome CDS2283477 447 + 0.574944
NA PFL_5643 DnaJ-like protein DjlAchromosome CDS6427697 768 - 0.682292
NA PFL_2505 peptidyl-prolyl cis-trans isomerase, FkbP-typechromosome CDS2772462 339 + 0.628319
NA PFL_2742 conserved hypothetical proteinchromosome CDS3035192 921 - 0.667752
NA PFL_4133 conserved hypothetical proteinchromosome CDS4798369 684 - 0.710526
NA PFL_1149 Glycoprotease family subfamilychromosome CDS1316862 732 + 0.653005
NA PFL_0940 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS1083677 486 + 0.590535
NA PFL_1115 conserved hypothetical proteinchromosome CDS1274550 5148 + 0.650544
NA PFL_1059 glutaredoxin family proteinchromosome CDS1208643 255 - 0.65098
NA PFL_3391 transcriptional regulator, putativechromosome CDS3913576 366 + 0.581967
NA PFL_6192 SPFH domain / Band 7 family proteinchromosome CDS7029697 1059 - 0.661001
NA PFL_5233 DnaJ domain protein, putativechromosome CDS5994427 1722 + 0.657375
NA PFL_0518 carbamoyltransferase family proteinchromosome CDS604411 1758 + 0.612628
NA PFL_1931 SirA proteinchromosome CDS2154480 252 + 0.607143
NA PFL_4592 glutathione S-transferasechromosome CDS5301949 603 + 0.641791
NA PFL_5609 conserved hypothetical proteinchromosome CDS6391340 1092 + 0.651099
NA PFL_1771 glutathione S-transferasechromosome CDS1973934 624 + 0.644231
NA PFL_5948 SPFH domain / Band 7 familychromosome CDS6761781 921 + 0.614549
NA PFL_2728 glutathione S-transferase domain proteinchromosome CDS3011030 621 - 0.645733
NA PFL_4454 Domain of unknown function (306) familychromosome CDS5165054 405 + 0.649383
NA PFL_4755 radical activating enzymechromosome CDS5494353 648 - 0.606481
NA PFL_4708 thioredoxin domain protein, DsbA familychromosome CDS5438468 660 + 0.537879
NA PFL_0482 thioredoxinchromosome CDS550559 435 - 0.641379
NA PFL_2580 conserved hypothetical proteinchromosome CDS2855759 612 - 0.653595
NA PFL_3660 yhgI proteinchromosome CDS4230469 585 - 0.613675
NA PFL_5124 Peptidase family M48 familychromosome CDS5889146 819 - 0.605617
NA PFL_2840 DnaJ domain protein, putativechromosome CDS3165385 1656 - 0.690821
NA PFL_0069 protoheme IX farnesyltransferasechromosome CDS66830 903 + 0.647841
NA PFL_6005 glutathione S-transferase domain proteinchromosome CDS6825979 648 - 0.631173
NA PFL_5790 conserved hypothetical proteinchromosome CDS6598137 498 + 0.584337
NA PFL_1582 selT/selW/selH selenoprotein domainchromosome CDS1781773 288 + 0.631944
NA PFL_6175 conserved hypothetical proteinchromosome CDS7012908 378 + 0.701058
NA PFL_1748 glutathione S-transferasechromosome CDS1955179 660 + 0.624242
NA PFL_5338 ATP-dependent protease, putativechromosome CDS6102357 2325 - 0.64086
NA PFL_3874 glutathione S-transferase domain proteinchromosome CDS4471298 1002 + 0.621756
NA PFL_5038 disulfide oxidoreductasechromosome CDS5796944 489 - 0.631902
NA PFL_0506 peptide methionine sulfoxide reductasechromosome CDS585459 648 - 0.617284
aat PFL_3882 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS4481155 738 + 0.617886
ahpC PFL_3395 alkyl hydroperoxide reductase, subunit Cchromosome CDS3917282 594 - 0.574074
bcp PFL_1455 AhpC/TSA family proteinchromosome CDS1635092 474 - 0.607595
bcpB PFL_4258 bcpBchromosome CDS4957589 570 + 0.659649
ccmB PFL_1681 heme exporter protein CcmBchromosome CDS1883805 669 + 0.632287
ccmC PFL_1682 heme exporter protein CcmCchromosome CDS1884564 756 + 0.601852
ccmE PFL_1684 cytochrome c-type biogenesis protein CcmEchromosome CDS1885489 456 + 0.616228
ccmF PFL_1685 cytochrome c-type biogenesis protein CcmFchromosome CDS1885948 1989 + 0.661136
ccoN PFL_1925 cytochrome c oxidase, cbb3-type, subunit Ichromosome CDS2145126 1425 - 0.610526
ccoN PFL_1921 cytochrome c oxidase, cbb3-type, subunit Ichromosome CDS2141394 1443 - 0.602218
ccoN PFL_2834 cytochrome c oxidase, cbb3-type, subunit Ichromosome CDS3157117 1428 - 0.640756
ccoQ PFL_1919 cytochrome c oxidase, cbb3-type, CcoQ subunitchromosome CDS2140595 186 - 0.553763
ccoQ PFL_1923 cytochrome c oxidase, cbb3-type, CcoQ subunitchromosome CDS2144273 231 - 0.606061
clpA PFL_3885 ATP-dependent clp protease, ATP-binding subunit ClpAchromosome CDS4483104 2271 - 0.598855
clpB PFL_6093 clpB protein VCA0116chromosome CDS6920216 2676 + 0.656203
clpB PFL_4161 ATP-dependent Clp protease regulatory subunitchromosome CDS4829256 1839 + 0.661773
clpP PFL_3987 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS4605758 636 - 0.564465
clpX PFL_3986 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS4604362 1317 - 0.539104
cycH PFL_1688 cytochrome c-type biogenesis protein CycHchromosome CDS1888933 1212 + 0.671617
cycL PFL_1687 cytochrome c-type biogenesis protein CycLchromosome CDS1888466 471 + 0.632696
dnaJ-1 PFL_0628 curved-DNA-binding protein, DnaJ familychromosome CDS736265 957 + 0.630094
dsbE PFL_1686 thiol:disulfide interchange protein DsbEchromosome CDS1887933 537 + 0.636872
fliS PFL_1632 flagellar protein FliSchromosome CDS1835112 396 + 0.568182
ftsH PFL_0836 ATP-dependent metalloprotease FtsHchromosome CDS965605 1905 + 0.591076
gcp PFL_5660 O-sialoglycoprotein endopeptidasechromosome CDS6446025 1026 - 0.625731
glnD PFL_1174 protein-P-II uridylyltransferasechromosome CDS1343963 2703 - 0.63596
glnE PFL_0510 glutamate-ammonia-ligase adenylyltransferasechromosome CDS594176 2940 + 0.653401
groES PFL_4839 chaperonin, 10 kDachromosome CDS5584107 294 - 0.561224
grpE PFL_0826 co-chaperone GrpEchromosome CDS953847 567 + 0.597884
gxrC PFL_0373 glutaredoxinchromosome CDS425810 255 + 0.623529
hflC PFL_0569 HflC proteinchromosome CDS662174 870 + 0.606897
hflC PFL_6193 SPFH domain / Band 7 family proteinchromosome CDS7030752 1041 - 0.666667
hflK PFL_0568 HflK proteinchromosome CDS660996 1179 + 0.597116
hscA PFL_4961 Fe-S protein assembly chaperone HscAchromosome CDS5714160 1863 - 0.630703
hscB PFL_4962 co-chaperone Hsc20chromosome CDS5716074 561 - 0.607843
hslU PFL_0436 heat shock protein HslVU, ATPase subunit HslUchromosome CDS499117 1341 - 0.629381
htpX PFL_4248 heat shock protein HtpXchromosome CDS4944723 888 + 0.595721
htpX PFL_2501 heat shock protein HtpXchromosome CDS2769718 1011 - 0.667656
lon PFL_3985 ATP-dependent protease Lachromosome CDS4601803 2397 - 0.567376
lon PFL_4923 ATP-dependent protease Lachromosome CDS5672609 2421 + 0.630318
maiA PFL_0969 maleylacetoacetate isomerasechromosome CDS1111119 639 + 0.657277
msrA PFL_2555 peptide methionine sulfoxide reductasechromosome CDS2829387 450 + 0.64
msrB PFL_4246 methionine-R-sulfoxide reductasechromosome CDS4942593 393 - 0.610687
mucD PFL_1451 S1C (protease Do) subfamily peptidase MucDchromosome CDS1630533 1431 + 0.615653
ohr PFL_4263 organic hydroperoxide resistance proteinchromosome CDS4961638 420 + 0.635714
osmC PFL_0043 hydroperoxide resistance protein OsmCchromosome CDS42933 432 + 0.611111
pcm PFL_1205 protein-L-isoaspartate O-methyltransferasechromosome CDS1379526 678 + 0.643068
pilD PFL_5289 type IV pilus prepilin peptidase PilDchromosome CDS6058937 873 + 0.634593
ppiC PFL_3569 peptidyl-prolyl cis-trans isomerase Cchromosome CDS4115162 282 + 0.606383
prtQ PFL_2960 peptidase, U32 familychromosome CDS3315964 2001 - 0.645177
radA PFL_5356 DNA repair protein RadAchromosome CDS6125899 1368 - 0.656433
smpB PFL_0819 SsrA-binding proteinchromosome CDS947985 483 - 0.583851
sppA PFL_3667 peptidase, U7 familychromosome CDS4241924 1035 - 0.610628
sspA PFL_5077 stringent starvation protein Achromosome CDS5839320 618 - 0.588997
tig PFL_3988 trigger factorchromosome CDS4606486 1311 - 0.556827
trxA PFL_5982 thioredoxinchromosome CDS6800589 330 - 0.566667
trxB PFL_0945 thioredoxin-disulfide reductasechromosome CDS1088438 963 + 0.632399
trxB PFL_3881 thioredoxin-disulfide reductasechromosome CDS4480189 951 + 0.636172
ureD PFL_0636 urease accessory protein UreDchromosome CDS742544 840 - 0.703571
ureE PFL_0609 urease accessory protein UreEchromosome CDS709239 501 - 0.672655
ureF PFL_0608 urease accessory protein UreFchromosome CDS708568 675 - 0.66963
ureG PFL_0607 urease accessory protein UreGchromosome CDS707944 615 - 0.650406
ureJ PFL_0606 urease accessory protein UreJchromosome CDS707333 573 - 0.710297