Gene list
Applied filters:
COG category: Posttranslational modification, protein turnover, chaperones
Organism: Vibrio fischeri ES114, ES114
Number of genes found: 155
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Vibrio fischeri ES114, ES114 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | VF1858 | flagellar protein FliS | chromosome I | CDS | 2095181 | 411 | - | 0.399027 |
NA | VF0226 | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA | chromosome I | CDS | 245883 | 795 | + | 0.403774 |
NA | VF1467 | chaperone protein DnaK | chromosome I | CDS | 1627669 | 1899 | + | 0.425487 |
NA | VF2249 | O-sialoglycoprotein endopeptidase | chromosome I | CDS | 2531404 | 1017 | - | 0.425762 |
NA | VFA0434 | molecular chaperones (DnaJ family) | chromosome II | CDS | 498224 | 618 | + | 0.359223 |
NA | VF1288 | hypothetical protein | chromosome I | CDS | 1441191 | 243 | + | 0.423868 |
NA | VF1152 | endopeptidase HtpX | chromosome I | CDS | 1280264 | 876 | + | 0.428082 |
NA | VF1517 | heat shock protein 70 | chromosome I | CDS | 1695223 | 1821 | + | 0.430533 |
NA | VF0909 | thioredoxin | chromosome I | CDS | 1004343 | 435 | - | 0.406897 |
NA | VF2320 | protease activity modulator HflC | chromosome I | CDS | 2613876 | 885 | - | 0.39548 |
NA | VF0019 | hypothetical transcriptional regulatory protein | chromosome I | CDS | 21222 | 252 | - | 0.388889 |
NA | VF1818 | thiol:disulfide interchange protein TlpA | chromosome I | CDS | 2057888 | 552 | - | 0.403986 |
NA | VFA0759 | hypothetical membrane protein | chromosome II | CDS | 856356 | 570 | - | 0.382456 |
NA | VFA0414 | ATP-dependent protease La | chromosome II | CDS | 467488 | 2331 | + | 0.374946 |
NA | VFA0962 | pyruvate formate-lyase activating enzyme | chromosome II | CDS | 1084424 | 912 | + | 0.389254 |
NA | VFA1040 | thiol peroxidase | chromosome II | CDS | 1176191 | 228 | + | 0.385965 |
NA | VF1548 | cytochrome c-type biogenesis protein CcmH | chromosome I | CDS | 1734979 | 450 | - | 0.342222 |
NA | VFA0457 | hypothetical protein | chromosome II | CDS | 525725 | 636 | - | 0.382075 |
NA | VF1762 | leucyl/phenylalanyl-tRNA--protein transferase | chromosome I | CDS | 1991833 | 720 | + | 0.365278 |
NA | VF0620 | chaperone protein HscB | chromosome I | CDS | 677107 | 516 | + | 0.372093 |
NA | VF1964 | GlnD, [protein-PII] uridylyltransferase | chromosome I | CDS | 2199647 | 2622 | + | 0.402746 |
NA | VF1384 | stringent starvation protein A | chromosome I | CDS | 1535648 | 645 | + | 0.39845 |
NA | VF0902 | thioredoxin reductase | chromosome I | CDS | 994287 | 966 | - | 0.42236 |
NA | VF1822 | heme chaperone heme-lyase | chromosome I | CDS | 2061110 | 753 | - | 0.414343 |
NA | VF2188 | type 4 prepilin peptidase | chromosome I | CDS | 2466917 | 888 | + | 0.396396 |
NA | VF0672 | urease accessory protein UreE | chromosome I | CDS | 735657 | 492 | - | 0.439024 |
NA | VF1920 | bacterioferritin comigratory protein | chromosome I | CDS | 2154504 | 471 | + | 0.37155 |
NA | VF0314 | FKBP-type peptidyl-prolyl cis-trans isomerase FklB | chromosome I | CDS | 324064 | 621 | - | 0.446055 |
NA | VF0331 | peptide methionine sulfoxide reductase | chromosome I | CDS | 340538 | 579 | - | 0.37133 |
NA | VF0493 | putative protease YhbU precursor | chromosome I | CDS | 530777 | 1002 | - | 0.41018 |
NA | VF1584 | glutaredoxin 2 | chromosome I | CDS | 1778002 | 651 | + | 0.347158 |
NA | VF0223 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 243650 | 654 | + | 0.460245 |
NA | VF1349 | hypothetical protein | chromosome I | CDS | 1494182 | 1743 | - | 0.407917 |
NA | VF1466 | small heat shock protein | chromosome I | CDS | 1627123 | 423 | + | 0.392435 |
NA | VFA0331 | hypothetical protein | chromosome II | CDS | 365067 | 2280 | - | 0.379386 |
NA | VF1601 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 1800109 | 498 | + | 0.401606 |
NA | VFA0166 | hypothetical conserved protein | chromosome II | CDS | 188946 | 924 | + | 0.408009 |
NA | VF1299 | cytochrome c oxidase polypeptide I | chromosome I | CDS | 1453663 | 1431 | + | 0.408805 |
NA | VF0449 | thiol:disulfide interchange protein DsbC | chromosome I | CDS | 478834 | 777 | + | 0.377091 |
NA | VFA0032 | thioredoxin peroxidase | chromosome II | CDS | 34163 | 534 | + | 0.38015 |
NA | VF1809 | insulin-degrading enzyme | chromosome I | CDS | 2044179 | 2778 | + | 0.38013 |
NA | VF1301 | hypothetical protein | chromosome I | CDS | 1455728 | 186 | + | 0.38172 |
NA | VF1820 | cytochrome c-type biogenesis heme chaperone | chromosome I | CDS | 2060398 | 486 | - | 0.415638 |
NA | VF1082 | glutathione S-transferase | chromosome I | CDS | 1195547 | 693 | + | 0.401154 |
NA | VF1083 | glutathione S-transferase | chromosome I | CDS | 1196284 | 861 | + | 0.385598 |
NA | VF1990 | peptidase family U32 | chromosome I | CDS | 2229604 | 1389 | + | 0.424766 |
NA | VF0900 | transport ATP-binding protein CydC | chromosome I | CDS | 990648 | 1722 | - | 0.415796 |
NA | VF1763 | arginine-tRNA-protein transferase | chromosome I | CDS | 1992549 | 693 | + | 0.36075 |
NA | VFA0828 | glutaredoxin 2 | chromosome II | CDS | 931413 | 363 | - | 0.374656 |
NA | VF0671 | urease accessory protein UreF | chromosome I | CDS | 734980 | 666 | - | 0.426426 |
NA | VF2555 | ATPase related to magnesium chelatase subunit ChlI | chromosome I | CDS | 2884335 | 1527 | - | 0.426326 |
NA | VF0057 | thioredoxin | chromosome I | CDS | 64388 | 327 | + | 0.41896 |
NA | VF0922 | glutaredoxin | chromosome I | CDS | 1018017 | 336 | + | 0.404762 |
NA | VF1207 | chaperone protein DnaK | chromosome I | CDS | 1347509 | 1353 | + | 0.391722 |
NA | VF1731 | stringent starvation protein A | chromosome I | CDS | 1957895 | 630 | + | 0.349206 |
NA | VF0798 | ATP-dependent protease La | chromosome I | CDS | 873804 | 2355 | + | 0.396603 |
NA | VF2279 | OsmC-like protein | chromosome I | CDS | 2568705 | 405 | - | 0.414815 |
NA | VF0797 | ATP-dependent Clp protease ATP-binding subunit ClpX | chromosome I | CDS | 872386 | 1287 | + | 0.383061 |
NA | VFB35 | possible trypsin protease precursor | pES100 | CDS | 23639 | 1032 | + | 0.416667 |
NA | VF1040 | possible protease SohB | chromosome I | CDS | 1149236 | 1062 | + | 0.382298 |
NA | VF1262 | glutaredoxin | chromosome I | CDS | 1406391 | 576 | + | 0.409722 |
NA | VFA0335 | osmotically inducible protein C | chromosome II | CDS | 372369 | 423 | + | 0.399527 |
NA | VF1848 | flagellar FliJ protein | chromosome I | CDS | 2083975 | 444 | - | 0.385135 |
NA | VF1819 | heme chaperone--apocytochrome heme-lyase | chromosome I | CDS | 2058443 | 1959 | - | 0.416029 |
NA | VF2477 | 33 kDa chaperonin | chromosome I | CDS | 2781506 | 876 | + | 0.401826 |
NA | VF2553 | thiol:disulfide interchange protein DsbA | chromosome I | CDS | 2882725 | 603 | + | 0.371476 |
NA | VF1816 | cytochrome c-type biogenesis protein CcmI | chromosome I | CDS | 2056159 | 1218 | - | 0.372742 |
NA | VF0013 | small heat shock protein | chromosome I | CDS | 13895 | 435 | + | 0.395402 |
NA | VF1765 | ATP-dependent Clp protease ATP-binding subunit ClpA | chromosome I | CDS | 1993672 | 2253 | - | 0.397248 |
NA | VF0800 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 876808 | 1857 | + | 0.382337 |
NA | VFA0324 | thiol:disulfide interchange protein DsbD | chromosome II | CDS | 357355 | 1287 | - | 0.361305 |
NA | VF0670 | urease accessory protein UreG | chromosome I | CDS | 734350 | 621 | - | 0.439614 |
NA | VF1823 | heme exporter protein B | chromosome I | CDS | 2061906 | 669 | - | 0.382661 |
NA | VF2321 | protease activity modulator HflK | chromosome I | CDS | 2614763 | 1206 | - | 0.404643 |
NA | VF1555 | cytochrome c-type biogenesis protein CcmI | chromosome I | CDS | 1742152 | 648 | - | 0.368827 |
NA | VF2494 | thiol:disulfide interchange protein DsbD | chromosome I | CDS | 2802665 | 2097 | - | 0.420124 |
NA | VF1975 | alkyl hydroperoxide reductase C22 protein | chromosome I | CDS | 2213877 | 609 | + | 0.453202 |
NA | VFB54 | attachment mediating protein VirB5 homolog | pES100 | CDS | 44060 | 741 | + | 0.414305 |
NA | VF0288 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 292630 | 1314 | - | 0.402588 |
NA | VF1293 | ATP-dependent protease La | chromosome I | CDS | 1446136 | 1671 | - | 0.378217 |
NA | VF1880 | flagella basal body P ring formation protein FlgA | chromosome I | CDS | 2119405 | 768 | + | 0.385417 |
NA | VF0511 | hypothetical protein | chromosome I | CDS | 548216 | 438 | + | 0.287671 |
NA | VFA0889 | TagD-like protein/thioperoxidase | chromosome II | CDS | 1009300 | 507 | + | 0.34714 |
NA | VF0659 | ribosomal protein S6 modification protein | chromosome I | CDS | 724112 | 441 | - | 0.419501 |
NA | VF0646 | Thiol:disulfide interchange protein DsbA | chromosome I | CDS | 706531 | 600 | + | 0.373333 |
NA | VF2226 | protease DegS precursor | chromosome I | CDS | 2503809 | 1065 | + | 0.406573 |
NA | VF2002 | SsrA-binding protein | chromosome I | CDS | 2242553 | 486 | + | 0.401235 |
NA | VF0676 | urease accessory protein UreD | chromosome I | CDS | 738599 | 864 | - | 0.407407 |
NA | VF1993 | chaperone protein DnaJ | chromosome I | CDS | 2232604 | 1140 | - | 0.434211 |
NA | VFA0456 | peptidyl-prolyl cis-trans isomerase | chromosome II | CDS | 525227 | 474 | - | 0.394515 |
NA | VFA0697 | peptidyl-prolyl cis-trans isomerase | chromosome II | CDS | 774454 | 279 | - | 0.383513 |
NA | VFA0671 | hypothetical protein | chromosome II | CDS | 741006 | 498 | - | 0.361446 |
NA | VF0205 | 60 kDa chaperonin GROEL | chromosome I | CDS | 227965 | 1647 | + | 0.437766 |
NA | VF2277 | ATP-dependent protease HslV | chromosome I | CDS | 2566694 | 582 | + | 0.419244 |
NA | VF0795 | trigger factor, ppiase | chromosome I | CDS | 870272 | 1299 | + | 0.422633 |
NA | VF1103 | hypothetical protein | chromosome I | CDS | 1219388 | 468 | + | 0.356838 |
NA | VF1550 | heme chaperone--apocytochrome heme-lyase | chromosome I | CDS | 1735952 | 1887 | - | 0.370429 |
NA | VF1712 | glycoprotease protein family | chromosome I | CDS | 1930795 | 702 | - | 0.438746 |
NA | VF0796 | ATP-dependent Clp protease proteolytic subunit | chromosome I | CDS | 871676 | 624 | + | 0.407051 |
NA | VFA0284 | ATP-dependent Zn proteases | chromosome II | CDS | 316616 | 642 | + | 0.384735 |
NA | VF2492 | copper sensitivity protein ScsC | chromosome I | CDS | 2801409 | 729 | - | 0.373114 |
NA | VFA0282 | anaerobic ribonucleoside-triphosphate reductase activating protein | chromosome II | CDS | 314803 | 471 | + | 0.37155 |
NA | VF0792 | chaperone protein HtpG | chromosome I | CDS | 866075 | 1896 | + | 0.378165 |
NA | VFA0821 | glutathione S-transferase | chromosome II | CDS | 925104 | 711 | - | 0.383966 |
NA | VFA0273 | elastase 2 precursor | chromosome II | CDS | 303834 | 960 | + | 0.394792 |
NA | VF0566 | ClpB protein | chromosome I | CDS | 614446 | 2586 | + | 0.379737 |
NA | VF0721 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 789073 | 561 | - | 0.376114 |
NA | VF1996 | GrpE protein | chromosome I | CDS | 2237437 | 585 | - | 0.406838 |
NA | VF1549 | thiol:disulfide interchange protein TlpA | chromosome I | CDS | 1735428 | 528 | - | 0.380682 |
NA | VF2493 | thiol:disulfide interchange protein TlpA | chromosome I | CDS | 2802162 | 486 | - | 0.430041 |
NA | VF1098 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 1215945 | 540 | - | 0.362963 |
NA | VF2278 | ATP-dependent Hsl protease ATP-binding subunit HslU | chromosome I | CDS | 2567295 | 1335 | + | 0.418727 |
NA | VF0861 | heat shock protein HslJ | chromosome I | CDS | 947398 | 444 | - | 0.412162 |
NA | VF0890 | glutaredoxin | chromosome I | CDS | 980124 | 264 | - | 0.375 |
NA | VF0492 | putative protease YhbV precursor | chromosome I | CDS | 529889 | 879 | - | 0.373151 |
NA | VF1383 | hypothetical protein | chromosome I | CDS | 1533233 | 2244 | - | 0.368093 |
NA | VF1824 | heme exporter protein A | chromosome I | CDS | 2062575 | 615 | - | 0.38374 |
NA | VF0479 | cell division protein FtsH | chromosome I | CDS | 514520 | 1974 | + | 0.418946 |
NA | VF0469 | peptidyl-prolyl cis-trans isomerase | chromosome I | CDS | 502285 | 429 | + | 0.386946 |
NA | VF2356 | thiol:disulfide interchange protein DsbD | chromosome I | CDS | 2650798 | 1848 | + | 0.396645 |
NA | VF1869 | peptidoglycan hydrolase FlgJ | chromosome I | CDS | 2109474 | 1020 | - | 0.380392 |
NA | VF0204 | 10 kDa chaperonin GROES | chromosome I | CDS | 227597 | 291 | + | 0.388316 |
NA | VFA0598 | hypothetical protein | chromosome II | CDS | 680950 | 1230 | - | 0.365854 |
NA | VFA0005 | peptide methionine sulfoxide reductase MsrA/MsrB | chromosome II | CDS | 7276 | 1137 | + | 0.378188 |
NA | VF2235 | glutamate-ammonia-ligase adenylyltransferase | chromosome I | CDS | 2514952 | 2856 | - | 0.39986 |
NA | VF0421 | conserved hypothetical protein | chromosome I | CDS | 451169 | 273 | - | 0.410256 |
NA | VF2300 | thiol peroxidase | chromosome I | CDS | 2590787 | 729 | + | 0.411523 |
NA | VF2225 | endopeptidase DegP | chromosome I | CDS | 2502327 | 1368 | + | 0.396199 |
NA | VF0914 | peptide methionine sulfoxide reductase MsrB | chromosome I | CDS | 1009254 | 408 | + | 0.362745 |
NA | VF1370 | pyrrolidone-carboxylate peptidase | chromosome I | CDS | 1519906 | 639 | - | 0.411581 |
NA | VF1817 | cytochrome c-type biogenesis protein CcmH | chromosome I | CDS | 2057373 | 516 | - | 0.360465 |
NA | VF1496 | glutaredoxin | chromosome I | CDS | 1658222 | 288 | - | 0.326389 |
NA | VF1994 | chaperone protein DnaK | chromosome I | CDS | 2234124 | 1905 | - | 0.432021 |
NA | VF2461 | thioredoxin | chromosome I | CDS | 2767284 | 585 | - | 0.411966 |
NA | VFA0495 | queuosine biosynthesis protein QueE | chromosome II | CDS | 570573 | 681 | - | 0.397944 |
NA | VFA0277 | hypothetical protein | chromosome II | CDS | 308331 | 498 | - | 0.355422 |
NA | VFA0492 | hypothetical protein | chromosome II | CDS | 566674 | 1104 | - | 0.40942 |
NA | VFA0876 | hypothetical protein | chromosome II | CDS | 989314 | 774 | + | 0.290698 |
NA | VF0901 | transport ATP-binding protein CydD | chromosome I | CDS | 992362 | 1773 | - | 0.403835 |
NA | VF0783 | thioredoxin | chromosome I | CDS | 856906 | 855 | - | 0.392982 |
NA | VF0528 | DNA repair protein RadA | chromosome I | CDS | 565077 | 1383 | + | 0.425163 |
NA | VF2069 | protein-L-isoaspartate O-methyltransferase | chromosome I | CDS | 2310972 | 627 | - | 0.389155 |
NA | VFA0167 | hypothetical protein | chromosome II | CDS | 189879 | 453 | + | 0.392936 |
NA | VF0946 | ATP-dependent Zn proteases | chromosome I | CDS | 1041831 | 771 | - | 0.381323 |
NA | VF2216 | stringent starvation protein A | chromosome I | CDS | 2495651 | 636 | - | 0.410377 |
NA | VF1643 | signal peptide peptidase SppA | chromosome I | CDS | 1851358 | 1857 | + | 0.391492 |
NA | VF1538 | hypothetical protein | chromosome I | CDS | 1723100 | 2355 | + | 0.379193 |
NA | VF1108 | chaperone protein DnaJ | chromosome I | CDS | 1224012 | 906 | + | 0.406181 |
NA | VF1591 | pyruvate formate-lyase activating enzyme | chromosome I | CDS | 1787001 | 738 | + | 0.375339 |
NA | VF0621 | chaperone protein HscA | chromosome I | CDS | 677661 | 1851 | + | 0.408968 |
NA | VFA0890 | thioredoxin peroxidase | chromosome II | CDS | 1009806 | 612 | + | 0.325163 |
NA | VF1635 | disulfide bond formation protein B | chromosome I | CDS | 1841718 | 510 | + | 0.4 |
NA | VF0999 | ATP-dependent protease subunit | chromosome I | CDS | 1104712 | 2583 | - | 0.398374 |
NA | VF0290 | DnaJ-like protein DjlA | chromosome I | CDS | 296578 | 852 | + | 0.402582 |
NA | VFA0849 | glutathione S-transferase | chromosome II | CDS | 959537 | 861 | - | 0.404181 |