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2024-05-07 11:37:59

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043

Number of genes found: 153

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Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA1587 probable glutathione-S-transferasechromosome CDS1840982 693 + 0.536797
NA ECA3436 putative chaperonechromosome CDS3852301 2598 - 0.561586
NA ECA2690 putative glutathione S-transferasechromosome CDS3025403 618 + 0.535599
NA ECA3656 conserved hypothetical proteinchromosome CDS4105353 657 + 0.578387
NA ECA2037 OsmC-like proteinchromosome CDS2318802 477 + 0.545073
NA ECA0376 conserved hypothetical proteinchromosome CDS427331 738 - 0.533875
NA ECA1117 probable peroxidasechromosome CDS1269999 603 - 0.524046
NA ECA3850 putative membrane proteinchromosome CDS4304195 771 - 0.555123
NA ECA4212 thioredoxinchromosome CDS4709153 327 - 0.470948
NA ECA2791 putative glutathione S-transferasechromosome CDS3132533 687 + 0.544396
NA ECA1749 conserved hypothetical proteinchromosome CDS1998033 1728 - 0.518519
NA ECA1072 glutathione S-transferasechromosome CDS1201077 630 - 0.438095
NA ECA3044 putative glutathione-S transferasechromosome CDS3401812 627 + 0.5311
NA ECA1555 conserved hypothetical proteinchromosome CDS1810590 1794 - 0.571349
NA ECA1267 thioredoxinchromosome CDS1440451 1266 - 0.548183
NA ECA2649 thioredoxin reductasechromosome CDS2982496 960 + 0.519792
NA ECA0762 putative lipoproteinchromosome CDS834358 324 - 0.515432
NA ECA0388 putative peptidasechromosome CDS438255 1038 + 0.529865
NA ECA1196 putative membrane proteinchromosome CDS1357212 915 - 0.525683
NA ECA0832 putative phage capsid protein (partial)chromosome CDS922240 327 + 0.495413
NA ECA2374 conserved hypothetical proteinchromosome CDS2684682 702 - 0.574074
NA ECA3193 putative proteasechromosome CDS3573115 1365 + 0.542857
NA ECA2312 conserved hypothetical proteinchromosome CDS2617692 1143 + 0.503062
NA ECA3377 glutaredoxinchromosome CDS3794082 636 + 0.506289
NA ECA3915 putative peptidasechromosome CDS4383748 753 + 0.512616
NA ECA2626 putative phage-related proteinchromosome CDS2958118 327 - 0.461774
NA ECA1820 conserved hypothetical proteinchromosome CDS2065357 1371 - 0.54267
NA ECA2975 conserved hypothetical proteinchromosome CDS3325954 651 - 0.447005
NA ECA1933 conserved hypothetical proteinchromosome CDS2190305 1113 + 0.580413
NA ECA3769 putative pyruvate formate-lyase activating enzymechromosome CDS4211839 951 + 0.498423
NA ECA0975 conserved hypothetical proteinchromosome CDS1085686 273 - 0.483516
NA ECA1516 putative lipoproteinchromosome CDS1764218 498 + 0.556225
NA ECA3192 conserved hypothetical proteinchromosome CDS3571960 960 + 0.528125
NA ECA1220 putative thioredoxinchromosome CDS1389664 861 - 0.547038
NA ECA4134 conserved hypothetical proteinchromosome CDS4614245 576 + 0.526042
NA ECA3554 conserved hypothetical proteinchromosome CDS3985365 672 - 0.563988
NA ECA1927 conserved hypothetical proteinchromosome CDS2186467 351 + 0.478632
NA ECA0635 conserved hypothetical proteinchromosome CDS707778 996 - 0.518072
NA ECA1570 putative glutathione S-transferasechromosome CDS1826507 840 - 0.567857
NA ECA2926 putative glutathione-S-transferase (partial)chromosome CDS3269020 126 + 0.507937
NA ECA1195 putative membrane proteinchromosome CDS1356757 456 - 0.572368
NA ECA4063 conserved hypothetical proteinchromosome CDS4528356 408 - 0.509804
NA ECA1450 putative proteasechromosome CDS1645215 1620 + 0.543827
NA ECA2716 putative glutathione S transferasechromosome CDS3052224 645 + 0.497674
NA ECA4230 probable magnesium-chelatasechromosome CDS4733613 1527 + 0.525868
NA ECA0554 putative membrane proteinchromosome CDS622423 876 + 0.477169
NA ECA0721 conserved hypothetical proteinchromosome CDS790573 879 - 0.536974
NA ECA0722 putative proteasechromosome CDS791463 996 - 0.560241
NA ECA0787 putative membrane proteinchromosome CDS861360 552 + 0.539855
NA ECA2135 periplasmic pectate lyasechromosome CDS2434874 1707 - 0.521968
aat ECA2652 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS2987214 714 + 0.509804
ahpC ECA3942 alkyl hydroperoxide reductase C22 proteinchromosome CDS4413135 564 - 0.496454
ahpF ECA3941 alkyl hydroperoxide reductase subunit Fchromosome CDS4411424 1581 - 0.515496
bcp ECA1260 bacterioferritin comigratory proteinchromosome CDS1433409 468 - 0.444444
btuE ECA1833 putative vitamin B12 transport periplasmic proteinchromosome CDS2079241 552 + 0.494565
ccmA ECA1882 heme exporter protein Achromosome CDS2138606 621 + 0.587762
ccmB ECA1883 heme exporter protein Bchromosome CDS2139226 657 + 0.598173
ccmC ECA1884 heme exporter protein Cchromosome CDS2139951 741 + 0.556005
ccmE ECA1886 cytochrome C-type biogenesis proteinchromosome CDS2140906 483 + 0.561077
ccmF ECA1887 cytochrome C-type biogenesis proteinchromosome CDS2141385 1956 + 0.576687
ccmH1 ECA1889 cytochrome C-type biogenesis proteinchromosome CDS2143891 459 + 0.511983
ccmH2 ECA1890 cytochrome C-type biogenesis proteinchromosome CDS2144346 870 + 0.550575
clpA ECA2656 ATP-dependent CLP protease ATP-binding subunitchromosome CDS2990582 2274 - 0.529464
clpB ECA3345 ClpB protein (heat shock protein f84.1)chromosome CDS3760023 2577 - 0.496314
clpP ECA1148 ATP-dependent Clp protease proteolytic subunitchromosome CDS1301367 624 + 0.472756
clpX ECA1149 ATP-dependent Clp protease ATP-binding subunitchromosome CDS1302154 1275 + 0.509804
cydC ECA2651 ABC transporter ATP-binding proteinchromosome CDS2985450 1740 + 0.547126
cydD ECA2650 ABC transporter ATP-binding proteinchromosome CDS2983684 1767 + 0.539898
cyoE ECA1139 protoheme IX farnesyltransferasechromosome CDS1291267 891 - 0.499439
cysT ECA0884 sulphate transport system permease proteinchromosome CDS985221 855 + 0.547368
cysU ECA3298 sulfate ABC transporter permease proteinchromosome CDS3704801 813 - 0.522755
degP ECA3301 protease Dochromosome CDS3708493 1467 - 0.539877
degQ ECA0303 exported proteasechromosome CDS348586 1371 - 0.531729
degS ECA0302 exported proteasechromosome CDS347351 1098 - 0.509107
djlA ECA3855 putative DnaJ-like heat shock proteinchromosome CDS4313211 876 - 0.526256
dnaJ ECA3881 chaperone protein DnaJchromosome CDS4342359 1140 - 0.549123
dnaK ECA3882 chaperone protein DnaKchromosome CDS4343607 1908 - 0.506813
dsbA ECA0020 thiol:disulfide interchange proteinchromosome CDS24825 624 + 0.450321
dsbB ECA2362 disulfide bond formation protein Bchromosome CDS2674846 531 + 0.504708
dsbC ECA0771 thiol:disulfide interchange proteinchromosome CDS840892 717 + 0.523013
dsbD ECA0618 thiol:disulfide interchange proteinchromosome CDS690918 1734 - 0.563437
dsbE ECA1888 thiol:disulfide interchange proteinchromosome CDS2143337 558 + 0.546595
dsbG ECA0066 thiol:disulfide interchange proteinchromosome CDS80829 756 - 0.533069
fdhE ECA3002 FdhE proteinchromosome CDS3355865 930 - 0.54086
fklB ECA3607 FkbP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4057307 621 - 0.542673
fkpA ECA4049 FkbP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4516657 819 - 0.484737
fkpB ECA3874 FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerasechromosome CDS4334383 474 - 0.550633
flgA ECA1701 flagella basal body P-ring formation proteinchromosome CDS1950142 669 - 0.490284
flgJ ECA1710 peptidoglycan hydrolasechromosome CDS1957413 963 + 0.49325
flgN ECA1699 flagella synthesis proteinchromosome CDS1949261 438 - 0.456621
fliJ ECA1722 flagellar proteinchromosome CDS1967157 447 - 0.46085
fliS ECA1729 flagellar proteinchromosome CDS1973615 411 - 0.486618
gcp ECA0683 O-sialoglycoprotein endopeptidasechromosome CDS755628 1014 + 0.560158
glnD ECA1029 [protein-PII] uridylyltransferasechromosome CDS1150431 2715 - 0.55175
glnE ECA3585 glutamate-ammonia-ligase adenylyltransferasechromosome CDS4029078 2856 - 0.55077
groL ECA0625 60 kDa chaperoninchromosome CDS697515 1650 + 0.515152
groS ECA0624 10 kDa chaperoninchromosome CDS697176 294 + 0.472789
grpE ECA0842 heat shock proteinchromosome CDS932209 588 + 0.520408
grxA ECA2681 glutaredoxin 1chromosome CDS3016496 267 + 0.483146
grxB ECA2526 glutaredoxin 2chromosome CDS2842935 648 + 0.503086
gst ECA1938 glutathione S-transferasechromosome CDS2195117 609 - 0.474548
hflB ECA0698 cell division proteinchromosome CDS768185 1938 + 0.508772
hflC ECA3931 putative phage-related proteinchromosome CDS4398820 996 - 0.51004
hflK ECA3932 putative phage-related proteinchromosome CDS4399819 1254 - 0.5311
hscA ECA3233 chaperone proteinchromosome CDS3616632 1851 - 0.56564
hscB ECA3234 chaperone proteinchromosome CDS3618557 519 - 0.526012
hslO ECA4105 heat shock protein (33 kDa chaperonin)chromosome CDS4574406 870 + 0.527586
hslU ECA4262 ATP-dependent Hsl protease ATP-binding subunit (heat shock protein)chromosome CDS4776424 1332 + 0.529279
hslV ECA4261 ATP-dependent protease (heat shock protein)chromosome CDS4775884 531 + 0.544256
htpG ECA1179 chaperone proteinchromosome CDS1333507 1890 + 0.503175
htpX ECA2427 heat shock proteinchromosome CDS2740491 882 - 0.515873
hypB ECA1234 hydrogenase isoenzymes nickel incorporation proteinchromosome CDS1404189 876 - 0.528539
hypC ECA1233 hydrogenase isoenzymes formation proteinchromosome CDS1403920 279 - 0.519713
hypD ECA1232 hydrogenase isoenzymes formation proteinchromosome CDS1402802 1119 - 0.532618
hypE ECA1231 hydrogenase isoenzymes formation proteinchromosome CDS1401792 1011 - 0.551929
hypF ECA1251 hydrogenase maturation proteinchromosome CDS1422749 2304 + 0.579427
ibpA ECA4403 heat shock protein Achromosome CDS4942274 414 - 0.521739
ibpB ECA4402 heat shock protein Bchromosome CDS4941693 453 - 0.532009
lon ECA1150 ATP-dependent protease lachromosome CDS1303620 2382 + 0.510076
msrA ECA3597 peptide methionine sulfoxide reductasechromosome CDS4046883 639 + 0.568075
msrB ECA2343 peptide methionine sulfoxide reductasechromosome CDS2653967 420 - 0.535714
nifM ECA2941 nitrogen fixation proteinchromosome CDS3286909 798 - 0.567669
nifU ECA2946 nitrogen fixation proteinchromosome CDS3290800 840 - 0.567857
nrdG ECA0374 anaerobic ribonucleoside-triphosphate reductase activating proteinchromosome CDS424243 465 - 0.546237
nrdH ECA3335 putative glutaredoxinchromosome CDS3744803 240 + 0.483333
nrfE ECA1879 cytochrome C-type biogenesis proteinchromosome CDS2135317 1878 + 0.562833
nrfF ECA1880 formate-dependent nitrite reductase complex subunitchromosome CDS2137187 402 + 0.542289
nrfG ECA1881 formate-dependent nitrite reductase complex subunitchromosome CDS2137585 831 + 0.559567
ohr ECA3167 organic hydroperoxide resistance proteinchromosome CDS3536586 426 - 0.514085
osmC ECA2221 osmotically inducible protein Cchromosome CDS2524682 429 + 0.51049
outO ECA3098 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3458845 849 - 0.551237
pcm ECA3532 protein-L-isoaspartate O-methyltransferasechromosome CDS3960622 627 - 0.523126
pcp ECA1354 pyrrolidone-carboxylate peptidasechromosome CDS1533499 648 + 0.54784
pilU ECA0543 putative prepilin peptidasechromosome CDS613398 660 + 0.530303
ppiA ECA4071 peptidyl-prolyl cis-trans isomerase Achromosome CDS4538833 570 - 0.503509
ppiB ECA3154 peptidyl-prolyl cis-trans isomerase Bchromosome CDS3520193 495 + 0.486869
ppiC ECA4216 peptidyl-prolyl cis-trans isomerase Cchromosome CDS4714592 282 + 0.482269
ppiD ECA1152 peptidyl-prolyl cis-trans isomerase Dchromosome CDS1306869 1881 + 0.492291
ptrA ECA0994 protease III precursorchromosome CDS1106941 2949 + 0.527976
radA ECA0464 putative DNA repair proteinchromosome CDS528905 1383 - 0.571222
sirA ECA4353 SirA proteinchromosome CDS4874828 246 - 0.536585
slyD ECA4054 FkbP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4519847 585 - 0.538462
smpB ECA0836 SsrA-binding proteinchromosome CDS927358 483 - 0.505176
sohB ECA2288 proteasechromosome CDS2593787 1053 - 0.519468
sppA ECA2339 protease IVchromosome CDS2649493 1851 + 0.517018
sspA ECA0308 stringent starvation protein a; stringent starvation protein Achromosome CDS353367 642 + 0.515576
sufB ECA1860 conserved hypothetical proteinchromosome CDS2112831 1500 + 0.530667
sufC ECA1861 probable ABC transporter ATP-dependent proteinchromosome CDS2114428 747 + 0.507363
sufD ECA1862 conserved hypothetical proteinchromosome CDS2115176 1320 + 0.559091
surA ECA3857 survival proteinchromosome CDS4316738 1296 + 0.506944
tig ECA1147 trigger factorchromosome CDS1299536 1305 + 0.495785
tpx ECA1990 thiol peroxidasechromosome CDS2258122 504 - 0.503968
trxC ECA3517 thioredoxin 2chromosome CDS3938346 420 + 0.516667