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2024-05-05 18:12:41

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 143

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB0495 putative proteasechromosome CDS584883 996 - 0.523092
NA YPTB2313 conserved hypothetical proteinchromosome CDS2729772 1512 - 0.494709
NA YPTB1345 putative glutathione S-transferase-family proteinchromosome CDS1604371 621 - 0.486312
NA YPTB1858 similar to V protein phage 186chromosome CDS2203663 816 - 0.493873
NA YPTB3050 conserved hypothetical proteinchromosome CDS3602096 636 + 0.47956
NA YPTB1025 conserved hypothetical proteinchromosome CDS1231944 915 - 0.469945
NA YPTB2312 putative ATP-dependent transporterchromosome CDS2728841 747 - 0.453815
NA YPTB1451 putative Lon proteasechromosome CDS1744320 1773 - 0.51269
NA YPTB0119 putative peroxiredoxin/glutaredoxin family proteinchromosome CDS141499 732 - 0.461749
NA YPTB0161 putative exported proteinchromosome CDS192049 792 - 0.340909
NA YPTB0214 conserved hypothetical proteinchromosome CDS256913 255 + 0.513726
NA YPTB0332 conserved hypothetical proteinchromosome CDS397288 270 + 0.551852
NA YPTB3055 Prepilin peptidasechromosome CDS3606313 843 - 0.357058
NA YPTB3225 Conserved hypothetical proteinchromosome CDS3797766 273 + 0.410256
NA YPTB1026 putative thioredoxinchromosome CDS1233053 870 - 0.508046
NA YPTB3370 Putative membrane proteinchromosome CDS4004573 423 + 0.399527
NA YPTB3773 conserved hypothetical proteinchromosome CDS4477394 576 + 0.46875
NA YPTB2641 putative cytochrome c-type biogenesis proteinchromosome CDS3120784 1227 - 0.496333
NA YPTB2084 conserved hypothetical proteinchromosome CDS2455788 414 + 0.454106
NA YPTB3728 conserved hypothetical proteinchromosome CDS4421965 408 - 0.490196
NA YPTB1024 putative membrane proteinchromosome CDS1231492 450 - 0.506667
NA YPTB2311 conserved hypothetical proteinchromosome CDS2727541 1326 - 0.499246
NA YPTB3770 putative exported proteinchromosome CDS4475331 270 - 0.440741
NA YPTB0538 M48 peptidase family proteinchromosome CDS636271 1047 - 0.5234
NA YPTB1368 putative SPFH domain proteinchromosome CDS1630182 927 + 0.399137
NA YPTB2820 putative proteasechromosome CDS3334795 1395 + 0.496057
NA YPTB3484 Putative exported proteinchromosome CDS4151420 381 + 0.464567
NA YPTB2297 conserved hypothetical proteinchromosome CDS2710267 351 - 0.461538
NA YPTB3425 Conserved hypothetical proteinchromosome CDS4068500 717 + 0.493724
NA YPTB0133 putative magnesium chelatase family proteinchromosome CDS163475 1524 - 0.534777
NA YPTB3199 Putative conserved lipoprotein.chromosome CDS3764057 753 + 0.491368
NA YPTB1082 putative ABC transport protein with fused ATP binding and permease domainschromosome CDS1299831 1791 + 0.471803
NA YPTB3863 conserved hypothetical protein (partial)chromosome CDS4615368 408 - 0.441176
NA YPTB2286 conserved hypothetical proteinchromosome CDS2696737 1113 - 0.520216
NA YPTB3588 conserved hypothetical proteinchromosome CDS4267510 1176 + 0.458333
NA YPTB0494 conserved hypothetical proteinchromosome CDS583993 879 - 0.507395
NA YPTB2806 putative HSP 70 family heat shock proteinchromosome CDS3313107 1356 + 0.550147
NA YPTB2055 conserved hypothetical proteinchromosome CDS2421389 699 + 0.549356
NA YPTB1741 putative bacteriophage P2 tail protein gpTchromosome CDS2099162 2427 - 0.568603
NA YPTB1803 hypothetical proteinchromosome CDS2150978 810 + 0.496296
NA YPTB1850 gpR [Enterobacteria phage P2] sp|P36933|VPR_BPP2 TAIL COMPLE...chromosome CDS2199189 468 - 0.452991
NA YPTB1945 putative thioredoxinchromosome CDS2287877 531 + 0.468927
GrpE YPTB1141 heat shock protein GrpEchromosome CDS1364652 579 + 0.476684
aat YPTB1396 putative leucyl/phenylalanyl-tRNA-protein transferasechromosome CDS1662663 711 - 0.495077
ahpC YPTB0925 putative alkyl hydroperoxide reductase subunit Cchromosome CDS1118856 603 - 0.470978
bcp YPTB2785 bacterioferritin comigratory proteinchromosome CDS3288865 471 + 0.443737
btuE YPTB2332 putative ABC vitamin B12 transporter, periplasmic binding proteinproteinchromosome CDS2755132 555 - 0.445045
ccmA YPTB2649 putative ABC type heme exporter, ATP binding subunit ccmAchromosome CDS3127316 657 - 0.491629
ccmB YPTB2648 ABC type heme exporter, permease subunit ccmBchromosome CDS3126687 660 - 0.516667
ccmC YPTB2647 putative ABC type heme exporter, permease subunit ccmCchromosome CDS3125887 738 - 0.501355
ccmE YPTB2645 putative cytochrome c-type biogenesis proteinchromosome CDS3125049 495 - 0.511111
ccmF YPTB2644 putative cytochrome c-type biogenesis proteinchromosome CDS3123082 1971 - 0.524099
ccmG YPTB2643 thiol:disulfide interchange protein DsbEchromosome CDS3122519 567 - 0.497355
ccmH YPTB2642 putative cytochrome c-type biogenesis proteinchromosome CDS3122010 513 - 0.465887
clpA YPTB1394 ATP-dependent Clp protease ATP-binding subunitchromosome CDS1659590 2277 + 0.494071
clpB YPTB0647 putative ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpEchromosome CDS766349 2604 + 0.53341
clpB YPTB0848 ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpEchromosome CDS1015663 2574 + 0.479798
clpB2 YPTB3629 Clp ATPasechromosome CDS4321976 2604 - 0.529186
clpB3 YPTB1489 Clp ATPasechromosome CDS1782551 2649 + 0.584749
clpB3 YPTB3246 Clp ATPasechromosome CDS3823069 2649 - 0.592299
clpB5 YPTB2671 Clp ATPasechromosome CDS3154431 2658 - 0.481565
clpP YPTB0959 proteolytic subunit of clpA-clpP ATP-dependent serine protease, heat shock protein F21.5chromosome CDS1152879 624 + 0.461538
clpX YPTB0960 specificity component of clpA-clpP ATP-dependent serine protease, chaperonechromosome CDS1153708 1272 + 0.482704
cydC YPTB1397 putative ABC cytochrome efflux transporter, fused ATP-binding and permease domainschromosome CDS1663592 1725 - 0.514203
cydD YPTB1398 putative ABC cytochrome efflux transporter, fused ATP-binding and permease domainschromosome CDS1665319 1785 - 0.508123
cyoE YPTB0948 protohaeme IX farnesyltransferase (haeme O biosynthesis)chromosome CDS1141636 891 - 0.465769
cysT YPTB2734 ABC sulfate transporter, permease subunit CysTchromosome CDS3232582 834 - 0.539568
degQ YPTB3511 Proteasechromosome CDS4180382 1374 + 0.487627
degS YPTB3512 Proteasechromosome CDS4181845 1089 + 0.481175
djlA YPTB0637 DnaJ like chaperone proteinchromosome CDS755134 834 + 0.504796
dnaJ YPTB0612 heat shock protein, DnaJ and GrpE stimulates ATPase activity of DnaKchromosome CDS726671 1140 + 0.499123
dnaK YPTB0611 chaperone Hsp70 in DNA biosynthesis/cell divisionchromosome CDS724649 1911 + 0.47933
dsbA YPTB0017 secreted thiol:disulfide interchange protein DsbAchromosome CDS21869 624 + 0.421474
dsbB YPTB2070 disulfide bond formation protein Bchromosome CDS2437078 531 - 0.463277
dsbC YPTB3166 thiol:disulfide interchange protein (DsbC)chromosome CDS3724229 717 - 0.456067
dsbD YPTB0399 thiol:disulfide interchange proteinchromosome CDS476373 1788 - 0.520694
fdhE YPTB3930 putative formate dehydrogenase formation proteinchromosome CDS4692802 930 + 0.496774
fklB YPTB0444 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS526650 621 + 0.521739
fkpA YPTB3710 peptidyl-prolyl cis-trans isomerasechromosome CDS4405391 801 - 0.456929
fkpB YPTB0619 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS735438 459 + 0.48366
flgA YPTB3341 Putative flagella basal body P-ring formation proteinchromosome CDS3973294 819 + 0.498168
flgA YPTB1671 flagella basal body P-ring formation protein FlgAchromosome CDS2024781 699 - 0.522175
flgJ YPTB3332 Putative flagellar proteinchromosome CDS3966598 294 - 0.496599
flgJ YPTB1680 flagellar protein FlgJchromosome CDS2032272 945 + 0.540741
flgN YPTB1669 flagella synthesis protein FlgNchromosome CDS2023869 441 - 0.485261
fliJ YPTB1699 flagellar protein FliJchromosome CDS2053183 447 - 0.478747
fliS YPTB3324 Putative flagellar proteinchromosome CDS3957802 384 - 0.388021
fliS YPTB1712 flagellar protein FliSchromosome CDS2066143 399 - 0.471178
fliT YPTB1711 FliTchromosome CDS2065770 363 - 0.424242
ftsH YPTB0474 cell division proteinchromosome CDS557998 1935 + 0.469251
gcp YPTB3415 putative O-sialoglycoprotein endopeptidase (glycoprotease)chromosome CDS4056331 1014 - 0.518738
glnD YPTB3005 [protein-PII] uridylyltransferasechromosome CDS3544063 2682 + 0.48956
glnE YPTB3408 probable glutamate-ammonia-ligase adenylyltransferase (ATASE)chromosome CDS4046990 2856 - 0.528011
groEL YPTB0405 60 kDa chaperoninchromosome CDS483158 1647 + 0.508197
groES YPTB0404 10 kDa chaperoninchromosome CDS482818 294 + 0.489796
grxA YPTB1358 glutaredoxin 1chromosome CDS1620307 264 - 0.439394
grxC YPTB0062 glutaredoxinchromosome CDS75018 249 + 0.514056
gst YPTB2281 glutathione S-transferasechromosome CDS2692485 606 + 0.453795
hflC YPTB0428 putative membrane proteinchromosome CDS512442 1005 + 0.502488
hflK YPTB0427 putative membrane proteinchromosome CDS511176 1263 + 0.501979
hscA YPTB2855 chaperone protein HscAchromosome CDS3380567 1935 - 0.547287
hscB YPTB2856 chaperone protein HscBchromosome CDS3382744 525 - 0.504762
hslJ YPTB2249 putative heat shock proteinchromosome CDS2656771 453 + 0.437086
hslO YPTB3761 heat-shock chaperoninchromosome CDS4463099 882 + 0.49093
hslU YPTB0097 ATP-binding heat shock proteinchromosome CDS109151 1332 - 0.491742
hslV YPTB0098 heat shock proteinchromosome CDS110553 525 - 0.487619
htpG YPTB0995 chaperone Hsp90, heat shock protein C 62.5chromosome CDS1194468 1875 + 0.464
htpX YPTB2375 putative heat shock proteinchromosome CDS2800050 882 - 0.470522
htrA YPTB0749 periplasmic serine protease Do, heat shock proteinchromosome CDS900329 1446 + 0.496542
ibpA YPTB3904 heat shock proteinchromosome CDS4659658 414 + 0.425121
ibpB YPTB3905 heat shock proteinchromosome CDS4660352 465 + 0.488172
lon YPTB0961 DNA-binding, ATP-dependent protease la; cleaves RcsA and SulA, heat shock k-proteinchromosome CDS1155174 2355 + 0.483227
msrA YPTB0451 peptide methionine sulfoxide reductasechromosome CDS534155 639 - 0.532081
nrdG YPTB0518 anaerobic ribonucleotide reductase activating proteinchromosome CDS607050 435 - 0.51954
nrdH YPTB2955 putative glutaredoxinchromosome CDS3486897 237 + 0.447257
pcm YPTB0774 L-isoaspartate protein carboxylmethyltransferase type IIchromosome CDS929033 627 + 0.491228
pcp YPTB2905 putative pyrrolidone-carboxylate peptidasechromosome CDS3436073 648 - 0.501543
pflA YPTB1406 pyruvate formate-lyase 1 activating enzymechromosome CDS1679108 735 - 0.466667
ppiA YPTB3734 peptidyl-prolyl cis-trans isomerase Achromosome CDS4429808 570 - 0.452632
ppiB YPTB1034 peptidyl-prolyl cis-trans isomerase Bchromosome CDS1241558 495 - 0.466667
ppiC YPTB0162 peptidyl-prolyl cis-trans isomerasechromosome CDS193079 282 - 0.450355
ppiD YPTB0963 peptidyl-prolyl cis-trans isomerase, for periplasmic folding of outer membrane proteinschromosome CDS1158319 1887 + 0.45522
ptrA YPTB3026 protease III precursorchromosome CDS3571474 2889 - 0.467636
radA YPTB0587 putative ATP-dependent protease, DNA repair proteinchromosome CDS691085 1383 + 0.547361
rcsC YPTB0881 putative accessory processing protein; involved in the adherence of host cellschromosome CDS1063502 1854 + 0.451456
slyD YPTB3712 peptidyl-prolyl cis-trans isomerasechromosome CDS4406945 594 - 0.523569
smpB YPTB1135 SsrA-binding protein (small protein B)chromosome CDS1359940 483 - 0.459627
sohB YPTB2138 peptidase family U7 proteinchromosome CDS2513405 1047 + 0.483286
sppA YPTB2088 protease IVchromosome CDS2458473 1851 - 0.479741
sspA YPTB3506 Putative stringent starvation protein Achromosome CDS4176192 642 - 0.487539
surA YPTB0635 peptidyl-prolyl cis-trans isomerase, survival proteinchromosome CDS751235 1305 - 0.488123
tig YPTB0958 peptidyl-prolyl cis/trans isomerase, trigger factor; a molecular chaperone involved in cell divisionchromosome CDS1151113 1305 + 0.471264
tpx YPTB2261 thiol peroxidasechromosome CDS2672155 504 + 0.492063
trxA YPTB0166 thioredoxin 1chromosome CDS198658 327 + 0.464832
trxB YPTB1399 thioredoxin reductasechromosome CDS1667544 963 - 0.515057
trxC YPTB0853 thioredoxin 2, redox factorchromosome CDS1029945 438 - 0.502283
ureD YPTB2938 possible urease accessory proteinchromosome CDS3470589 966 - 0.480331
ureE YPTB2941 urease accessory proteinchromosome CDS3473048 696 - 0.497126
ureF YPTB2940 urease accessory proteinchromosome CDS3472340 687 - 0.489083
ureG YPTB2939 urease accessory proteinchromosome CDS3471551 663 - 0.488688
ygcF YPTB0757 putative coenzyme PQQ synthesis protein, nitrogenase iron-molybdenum domainchromosome CDS912772 672 + 0.491071
yghU YPTB3590 putative glutathione S-transferasechromosome CDS4270434 855 + 0.492398
yqjG YPTB3489 Possible glutathione S-transferase.chromosome CDS4153724 987 + 0.495441