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2024-05-04 08:14:42

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4

Number of genes found: 86

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Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMM1287 conserved hypothetical proteinchromosome CDS1236811 2109 - 0.316264
NA PMM1104 conserved hypothetical proteinchromosome CDS1052321 474 - 0.219409
NA PMM1432 putative DnaK-type molecular chaperone (HSP70 family)chromosome CDS1369433 1566 + 0.307152
NA PMM0018 conserved hypothetical proteinchromosome CDS20155 234 + 0.264957
NA PMM0179 Glutaredoxinchromosome CDS173089 255 - 0.321569
NA PMM0015 Domain of unknown function DUF25chromosome CDS17712 495 + 0.343434
NA PMM1282 conserved hypothetical proteinchromosome CDS1232480 528 + 0.276515
NA PMM0072 ABC transporter, ATP binding componentchromosome CDS76872 786 - 0.321883
NA PMM0101 conserved hypothetical proteinchromosome CDS104981 936 - 0.300214
NA PMM1655 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)chromosome CDS1586108 1422 + 0.305907
NA PMM1111 Glutaredoxin-related proteinchromosome CDS1058617 324 + 0.308642
NA PMM1690 possible organic radical activating enzymechromosome CDS1624835 672 + 0.294643
NA PMM1333 Peptide methionine sulfoxide reductasechromosome CDS1283592 603 - 0.310116
NA PMM1425 Serine proteases, trypsin family:HtrA/DegQ protease familychromosome CDS1365186 1341 + 0.324385
NA PMM1187 conserved hypotheticalchromosome CDS1132339 1467 + 0.333333
NA PMM0122 possible heat shock protein DnaJchromosome CDS120073 678 - 0.283186
NA PMM1246 Carbamoyltransferasechromosome CDS1196890 1833 - 0.302237
NA PMM0221 Glutathione S-transferase C terminuschromosome CDS214782 948 - 0.276371
NA PMM0903 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family proteinchromosome CDS866018 534 + 0.292135
NA PMM1293 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)chromosome CDS1245526 573 + 0.347295
NA PMM1490 Serine proteasechromosome CDS1426813 1143 - 0.348206
NA PMM0765 possible heme transporterchromosome CDS728536 945 + 0.326984
NA PMM1001 conserved hypothetical proteinchromosome CDS950696 717 + 0.320781
NA PMM1025 putative stress-induced protein OsmCchromosome CDS969954 408 + 0.311274
NA PMM1150 putative thioredoxin reductasechromosome CDS1101483 1377 + 0.34931
NA PMM0345 putative bacterioferritin comigratory proteinchromosome CDS332317 450 + 0.346667
NA PMM0820 possible EPSP synthase (3-phosphoshikimate 1-cchromosome CDS774815 207 - 0.285024
NA PMM1251 Carbamoyltransferasechromosome CDS1202686 1854 - 0.351672
NA PMM1006 Glutathione peroxidasechromosome CDS956998 513 + 0.329435
NA PMM0418 NifU-like proteinchromosome CDS396312 246 - 0.341463
NA PMM0959 conserved hypothetical proteinchromosome CDS916593 957 - 0.282132
NA PMM0073 ABC transporter, membrane componentchromosome CDS77679 1443 - 0.352737
NA PMM0025 Cyclophilin-type peptidyl-prolyl cis-trans isomerasechromosome CDS26152 1092 - 0.335165
NA PMM0090 possible serine proteasechromosome CDS95155 1149 - 0.302872
NA PMM0566 conserved hypothetical proteinchromosome CDS533102 1239 - 0.302663
NA PMM0139 conserved hypothetical proteinchromosome CDS136897 651 - 0.261137
NA PMM0470 probable o-sialoglycoprotein endopeptidasechromosome CDS445994 1071 + 0.352941
NA PMM0110 putative glutathione S-transferasechromosome CDS112312 726 - 0.290634
NA PMM0799 conserved hypothetical proteinchromosome CDS759421 612 + 0.29902
NA PMM0873 possible DnaJ domainchromosome CDS829621 1014 - 0.296844
NA PMM0283 conserved hypothetical proteinchromosome CDS272674 594 + 0.304714
NA PMM1474 DnaJ-like proteinchromosome CDS1408136 447 - 0.263982
NA PMM0894 Cyclophilin-type peptidyl-prolyl cis-trans isomerasechromosome CDS857094 438 - 0.344749
NA PMM0447 conserved hypothetical proteinchromosome CDS426170 936 + 0.310897
GSTTLp28,P28,GSTO1 PMM0630 Glutathione S-transferase N terminuschromosome CDS599522 660 - 0.262121
bcp PMM0079 putative bacterioferritin comigratory (BCP) proteinchromosome CDS84786 468 + 0.290598
ccdA PMM1459 putative c-type cytochrome biogenesis protein CcdAchromosome CDS1393437 657 + 0.348554
clpB1 PMM0580 ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpBchromosome CDS543828 2583 - 0.29578
clpB2 PMM0207 putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpBchromosome CDS198413 2760 - 0.296014
clpC PMM1088 ClpCchromosome CDS1032024 2529 - 0.345987
clpP1 PMM0742 Clp protease subunitchromosome CDS703292 591 + 0.353638
clpP2 PMM1656 Clp protease proteolytic subunitchromosome CDS1587595 648 + 0.339506
clpP3 PMM1314 Clp protease proteolytic subunitchromosome CDS1267406 606 + 0.384488
clpP4 PMM1313 Clp protease proteolytic subunitchromosome CDS1266710 663 + 0.381599
clpX PMM1657 Clp protease ATP-binding subunit, ClpXchromosome CDS1588346 1368 + 0.332602
ctaB PMM0448 putative protoheme IX farnesyltransferasechromosome CDS427102 999 + 0.366366
dnaJ PMM0017 DnaJ proteinchromosome CDS19034 1125 + 0.379556
dnaJ2 PMM0896 DnaJ2 proteinchromosome CDS857995 942 - 0.33121
dnaK PMM0897 Molecular chaperone DnaK, heat shock protein hsp70chromosome CDS858920 1998 - 0.362362
dnaK2 PMM1704 Molecular chaperone DnaK2, heat shock protein hsp70-2chromosome CDS1641476 1905 - 0.364304
ftsH1 PMM0743 FtsH ATP-dependent protease homologchromosome CDS703879 1914 - 0.366249
ftsH2 PMM0226 cell division protein FtsH2chromosome CDS219760 1857 - 0.389338
ftsH3 PMM1264 cell division protein FtsH3chromosome CDS1217915 1863 - 0.382716
ftsH4 PMM0854 cell division protein FtsH4chromosome CDS810354 1755 + 0.311111
groEL PMM1436 GroEL protein (Chaperonin cpn60)chromosome CDS1373640 1635 - 0.4
groEL2,cpn60-2 PMM0452 GroEL2 protein (Chaperonin cpn60 2)chromosome CDS430556 1746 - 0.364834
groES PMM1437 GroES protein (Chaperonin cpn10)chromosome CDS1375326 312 - 0.435897
grpE PMM0016 Heat shock protein GrpEchromosome CDS18283 720 + 0.329167
hsp33 PMM0665 Hsp33 proteinchromosome CDS634282 903 - 0.333333
htpG PMM0901 heat shock protein HtpGchromosome CDS863832 1905 + 0.28189
kaiB PMM1343 possible circadian oscillation regulator KaiBchromosome CDS1295572 324 - 0.311728
msrA PMM0955 Peptide methionine sulfoxide reductasechromosome CDS913686 729 + 0.300412
phb PMM0482 Band 7 proteinchromosome CDS455827 807 + 0.361834
ppiA PMM1155 Cyclophilin-type peptidyl-prolyl cis-trans isomerasechromosome CDS1106215 534 - 0.250936
radA PMM0133 putative DNA repair protein RadAchromosome CDS130689 1353 - 0.309682
smpB PMM1616 tmRNA binding protein SmpBchromosome CDS1546573 528 + 0.291667
sppA PMM1180 signal peptide peptidase SppA (protease IV)chromosome CDS1128287 810 + 0.344444
tpx PMM0856 thioredoxin peroxidasechromosome CDS812943 585 - 0.360684
trxA PMM1061 Thioredoxinchromosome CDS1000324 324 - 0.385802
trxB PMM0211 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS204992 957 + 0.363636
txlA PMM0242 thioredoxin-like protein TxlAchromosome CDS236138 546 + 0.261905
ureD PMM0966 urease accessory protein UreDchromosome CDS923785 894 - 0.298658
ureE PMM0967 urease accessory protein UreEchromosome CDS924726 465 + 0.286022
ureF PMM0968 urease accessory protein UreFchromosome CDS925168 687 + 0.266376
ureG PMM0969 urease accessory protein UreGchromosome CDS925858 606 + 0.343234
ycf44 PMM1460 putative c-type cytochrome biogenesis protein Ccs1chromosome CDS1394094 1287 + 0.264957