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2024-05-17 13:09:33

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Bordetella parapertussis 12822, 12822

Number of genes found: 138

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Bordetella parapertussis 12822, 12822
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BPP2505 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2699581 612 - 0.648693
NA BPP1361 probable glutathione S-transferaseSubName: Full=Probable glutathione S-transferase; chromosome CDS1461644 696 + 0.66954
NA BPP1853 putative glutathione-S-transferaseSubName: Full=Putative glutathione-S-transferase; chromosome CDS1974407 687 + 0.669578
NA BPP3768 putative methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS4082294 561 - 0.655971
NA BPP3114 antioxidant proteinSubName: Full=Antioxidant protein; EC=3.1.1.-; chromosome CDS3353068 642 - 0.615265
NA BPP4146 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS4481664 903 - 0.726467
NA BPP3962 type 4 prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS4291067 993 - 0.72004
NA BPP3666 putative peptidyl-prolyl cis-trans isomeraseRecName: Full=Chaperone SurA; AltName: Full=Peptidyl-prolyl cis-trans isomerase SurA; Short=PPIase SurA; EC=5.2.1.8; AltName: Full=Rotamase SurA; Flags: Precursor; chromosome CDS3963436 1560 - 0.695513
NA BPP4235 putative cytochrome oxidase assembly proteinSubName: Full=Putative cytochrome oxidase assembly protein; chromosome CDS4572428 1032 - 0.682171
NA BPP1393 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS1494908 774 - 0.645995
NA BPP1625 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS1732501 1818 - 0.677668
NA BPP4234 UbiA prenyltransferase family proteinRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome CDS4571524 894 - 0.67226
NA BPP2476 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2654429 465 - 0.610753
NA BPP0497 probable glutathione S-transferaseSubName: Full=Probable glutathione S-transferase; chromosome CDS531831 621 - 0.698873
NA BPP2869 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3070581 255 - 0.686275
NA BPP0441 probable glutathione S-transferaseSubName: Full=Probable glutathione S-transferase; chromosome CDS466633 702 + 0.689459
NA BPP4342 probable Binding-protein-dependent transport system, permease proteinSubName: Full=Probable Binding-protein-dependent transport system, permease protein; chromosome CDS4677264 816 + 0.694853
NA BPP3539 conserved hypothetical proteinRecName: Full=Putative arginyl-tRNA--protein transferase; Short=Arginyltransferase; Short=R-transferase; EC=2.3.2.8; chromosome CDS3823412 735 + 0.669388
NA BPP1924 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS2061154 837 + 0.696535
NA BPP4364 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4701124 246 - 0.699187
NA BPP2877 lipoproteinSubName: Full=Lipoprotein; chromosome CDS3079573 1578 - 0.737009
NA BPP4022 probable ATP-binding component of ABC transporterSubName: Full=Probable ATP-binding component of ABC transporter; chromosome CDS4359282 1752 - 0.744863
NA BPP0752 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS797950 528 + 0.712121
NA BPP0788 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS843411 438 - 0.673516
NA BPP1365 putative thioredoxinSubName: Full=Putative thioredoxin; chromosome CDS1465650 336 - 0.696429
NA BPP2933 putative glutathione S-transferaseSubName: Full=Putative glutathione S-transferase; EC=2.5.1.18; chromosome CDS3143230 639 - 0.71205
NA BPP2372 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS2536134 531 + 0.677966
NA BPP1251 putative thiol:disulfide interchange proteinSubName: Full=Putative thiol:disulfide interchange protein; chromosome CDS1346930 816 + 0.745098
NA BPP1669 putative integral membrane zinc-metalloproteaseSubName: Full=Putative integral membrane zinc-metalloprotease; chromosome CDS1779788 1305 - 0.68046
NA BPP3839 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4157417 393 - 0.656489
NA BPP1779 probable cytochrome C oxidase subunitSubName: Full=Probable cytochrome C oxidase subunit; EC=1.9.3.1; chromosome CDS1905432 1572 + 0.635496
NA BPP1780A cytochrome C oxidase subunitSubName: Full=Cytochrome C oxidase subunit; chromosome CDS1907679 177 + 0.59322
NA BPP1197 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1273686 480 + 0.725
NA BPP1653 conserved hypothetical proteinRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS1763800 633 - 0.691943
NA BPP3048 putative glutaredoxinSubName: Full=Putative glutaredoxin; chromosome CDS3288552 729 - 0.628258
NA BPP0724 putative ATPase with chaperone activitySubName: Full=Putative ATPase with chaperone activity; chromosome CDS764327 2574 + 0.735043
NA BPP3245 putative chaperoninSubName: Full=Putative chaperonin; chromosome CDS3501205 915 + 0.671038
NA BPP1706 putative dioxygenaseSubName: Full=Putative dioxygenase; chromosome CDS1819126 927 - 0.642934
NA BPP3352 putative peptidyl-prolyl cis-trans isomeraseRecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans isomerase; Short=PPIase; EC=5.2.1.8; AltName: Full=Rotamase; Flags: Precursor; chromosome CDS3607987 777 + 0.6139
NA BPP2595 putative chelataseSubName: Full=Putative chelatase; chromosome CDS2796961 1503 + 0.75183
NA BPP3988 putative protein-L-isoaspartate O-methyltransferaseSubName: Full=Uncharacterized protein; chromosome CDS4322499 681 + 0.649046
NA BPP0066 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS58153 2097 + 0.665713
NA BPP1118 AhpC/TSA-family proteinSubName: Full=AhpC/TSA-family protein; chromosome CDS1191475 552 + 0.681159
NA BPP3487 putative GrpE chaperoneRecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS3771067 555 - 0.695495
NA BPP1350 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1450877 1062 - 0.756121
NA BPP0753 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS798569 816 + 0.746324
NA BPP3919 thioredoxinSubName: Full=Thioredoxin; chromosome CDS4243605 549 - 0.644809
NA BPP1426 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1525044 303 + 0.70297
NA BPP2917 glutathione peroxidaseRecName: Full=Glutathione peroxidase; chromosome CDS3131903 501 + 0.676647
NA BPP2800 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2997315 732 - 0.713115
NA BPP3547 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3834688 447 + 0.671141
NA BPP1547 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1655018 927 + 0.652643
NA BPP2217 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2366644 411 - 0.715328
NA BPP1273 putative glutatione S-transferaseSubName: Full=Putative glutatione S-transferase; EC=2.5.1.18; chromosome CDS1371867 651 - 0.700461
NA BPP2704 Putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS2901012 762 - 0.649606
NA BPP3486 putative thioredoxinSubName: Full=Putative thioredoxin; chromosome CDS3770679 381 - 0.682415
NA BPP4300 putative glutaredoxinSubName: Full=Putative glutaredoxin; chromosome CDS4634597 249 - 0.626506
NA BPP0384 conserved hypothetical proteinRecName: Full=Glutaredoxin; chromosome CDS404011 327 + 0.599388
NA BPP0266 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS276586 996 - 0.71988
NA BPP4045 putative thioredoxinSubName: Full=Putative thioredoxin; chromosome CDS4379567 492 + 0.626016
NA BPP0061 thiol:disulfide interchange proteinRecName: Full=Thiol:disulfide interchange protein DsbD; EC=1.8.1.8; AltName: Full=Protein-disulfide reductase; Flags: Precursor; chromosome CDS52462 1938 + 0.704334
NA BPP1171 probable glutathione S-transferaseSubName: Full=Probable glutathione S-transferase; chromosome CDS1254921 708 - 0.741525
NA BPP1703 conserved hypothetical proteinRecName: Full=Probable Fe(2+)-trafficking protein; chromosome CDS1813229 273 - 0.6337
NA BPP1034 heat shock proteinSubName: Full=Heat shock protein; chromosome CDS1112596 408 - 0.698529
NA BPP2446 heat shock proteaseRecName: Full=Protease HtpX homolog; EC=3.4.24.-; chromosome CDS2622210 882 - 0.676871
NA BPP2911 putative bacterioferritin comigratory proteinSubName: Full=Putative bacterioferritin comigratory protein; chromosome CDS3125899 540 + 0.675926
NA BPP2918 putative glutathione transferaseSubName: Full=Putative glutathione transferase; EC=2.5.1.18; chromosome CDS3132429 786 + 0.685751
NA BPP0067 putative cytochrome c asssembly proteinSubName: Full=Putative cytochrome c asssembly protein; chromosome CDS60259 1335 + 0.668914
NA BPP0443 putative exported proteinSubName: Full=Putative exported protein; chromosome CDS467598 861 + 0.657375
NA BPP1406 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1506876 513 + 0.719298
NA BPP3879 conserved hypothetical proteinRecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; chromosome CDS4199814 1137 + 0.741425
aat BPP3538 putative leucyl/phenylalanyl-tRNA--protein transferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome CDS3822620 765 + 0.713726
ahpC BPP3361 alkyl hydroperoxide reductaseSubName: Full=Alkyl hydroperoxide reductase; chromosome CDS3621645 549 + 0.59745
cbpA BPP1175 curved DNA-binding proteinSubName: Full=Curved DNA-binding protein; chromosome CDS1257257 939 + 0.7082
ccmA BPP2699 Putative heme export proteinRecName: Full=Cytochrome c biogenesis ATP-binding export protein CcmA; EC=3.6.3.41; AltName: Full=Heme exporter protein A; chromosome CDS2895945 675 - 0.754074
ccmB BPP2698 Heme exporter protein BRecName: Full=Heme exporter protein B; chromosome CDS2895314 666 - 0.720721
ccmC BPP2697 Putative heme export proteinSubName: Full=Putative heme export protein; chromosome CDS2894521 759 - 0.719368
ccmE BPP2696 cytochrome C-type biogenesis proteinRecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE; chromosome CDS2893924 462 - 0.720779
ccmF BPP2695 cytochrome C-type biogenesis proteinSubName: Full=Cytochrome C-type biogenesis protein; chromosome CDS2891933 1995 - 0.709273
ccmG BPP2694 cytochrome C-type biogenesis proteinSubName: Full=Cytochrome C-type biogenesis protein; chromosome CDS2891412 522 - 0.720307
ccmH BPP2693 cytochrome C-type biogenesis proteinSubName: Full=Cytochrome C-type biogenesis protein; chromosome CDS2890993 423 - 0.723404
clpA BPP2575 ATP-dependent clp protease ATP-bindingSubName: Full=ATP-dependent clp protease ATP-binding; chromosome CDS2772563 2349 + 0.65347
clpB BPP1814 ATP-dependent protease, ATPase subunitRecName: Full=Chaperone protein ClpB; chromosome CDS1935811 2598 + 0.666667
clpP BPP2006 ATP-dependent Clp protease proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS2144628 654 + 0.633027
clpX BPP2007 ATP-dependent Clp protease ATP-binding subunitRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS2145329 1362 + 0.635095
cpn10 BPP0869 10 kDa chaperoninRecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS940482 288 - 0.628472
cpn60 BPP0868 60 kDa chaperoninRecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS938806 1644 - 0.645377
cyaC BPP0320 cyclolysin-activating lysine-acyltransferaseRecName: Full=Cyclolysin-activating lysine-acyltransferase CyaC; EC=2.3.1.-; chromosome CDS335118 615 - 0.678049
cycH BPP2692 cytochrome C-type biogenesis proteinSubName: Full=Cytochrome C-type biogenesis protein; chromosome CDS2889767 1230 - 0.763415
cysU BPP1656 sulfate transport system permease proteinSubName: Full=Sulfate transport system permease protein; chromosome CDS1766998 882 + 0.688209
degQ BPP4280 proteaseSubName: Full=Protease; EC=3.4.21.-; chromosome CDS4615401 1116 - 0.715054
dnaJ BPP3484 molecular chaperoneRecName: Full=Chaperone protein DnaJ; chromosome CDS3767429 1134 - 0.667548
dnaK BPP3485 molecular chaperoneRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS3768663 1926 - 0.641745
dsbA BPP4354 thiol:disulfide interchange protein DsbA precursorRecName: Full=Thiol:disulfide interchange protein DsbA; Flags: Precursor; chromosome CDS4688636 630 + 0.669841
dsbB BPP1523 disulfide bond formation protein BSubName: Full=Disulfide bond formation protein B; chromosome CDS1629205 477 - 0.683438
dsbC BPP4150 putative thiol:disulphide interchange protein (periplasmic)RecName: Full=Probable thiol:disulfide interchange protein DsbC; Flags: Precursor; chromosome CDS4485053 840 - 0.667857
dsbG BPP1252 thiol:disulfide interchange protein precursorSubName: Full=Thiol:disulfide interchange protein; chromosome CDS1347775 837 + 0.734767
fkpB BPP1851 FkbP-type peptidyl-prolyl cis-trans isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1972957 477 + 0.67086
flgA BPP1484 flagella basal body P-ring formation proteinSubName: Full=Flagella basal body P-ring formation protein; chromosome CDS1592564 876 - 0.711187
flgJ BPP1493 peptidoglycan hydrolaseSubName: Full=Peptidoglycan hydrolase; EC=3.2.1.-; chromosome CDS1600011 1020 + 0.708824
fliJ BPP1506 flagellar protein FliJSubName: Full=Flagellar protein FliJ; chromosome CDS1613750 435 - 0.650575
fliS BPP1516 flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS1622114 429 - 0.671329
ftsH BPP2067 cell division proteinRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS2211889 1887 + 0.660837
gcp BPP3059 probable glycoproteaseRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS3297508 1041 - 0.717579
glnD BPP1525 [protein-PII] uridylyltransferaseRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; Includes: RecName: Full=[Protein-PII] uridylyltransferase; Short=PII uridylyltransferase; Short=UTase; EC=2.7.7.59; Includes: RecName: Full=[Protein-PII]-UMP uridylyl-removing enzyme; Short=UR; EC=3.1.4.-; chromosome CDS1630484 2598 - 0.704388
glnE BPP1875 glutamate-ammonia-ligase adenylyltransferaseRecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthetase adenylyltransferase; Short=ATase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; chromosome CDS2001782 2826 - 0.712668
grxC BPP0293 glutaredoxin 3SubName: Full=Glutaredoxin 3; chromosome CDS304021 294 - 0.656463
gst BPP0666 glutathione S-transferaseSubName: Full=Glutathione S-transferase; EC=2.5.1.18; chromosome CDS704674 639 + 0.693271
gst BPP2935 glutathione S-transferaseSubName: Full=Glutathione S-transferase; EC=2.5.1.18; chromosome CDS3145162 615 + 0.682927
gst BPP2742 glutathione S-transferaseSubName: Full=Glutathione S-transferase; EC=2.5.1.18; chromosome CDS2938516 624 + 0.690705
hflC BPP2846 putative inner membrane-anchored proteinRecName: Full=Protein HflC; chromosome CDS3047061 900 - 0.662222
hflK BPP2847 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS3047979 1305 - 0.656705
hscA BPP2032 chaperone proteinRecName: Full=Chaperone protein HscA homolog; chromosome CDS2171593 1914 + 0.717346
hscB BPP2031 chaperone proteinRecName: Full=Co-chaperone protein HscB homolog; chromosome CDS2171002 513 + 0.680312
hslU BPP0176 ATP-dependent Hsl protease ATP-binding subunitRecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome CDS188722 1335 - 0.644944
hslV BPP0177 ATP-dependent protease heat shock proteinRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome CDS190078 540 - 0.653704
htpG BPP0496 heat shock proteinRecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS529634 1908 + 0.648847
lon BPP2008 ATP-dependent protease LaRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS2146834 2499 + 0.632653
lon BPP1033 ATP-dependent protease LaRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS1110248 2352 - 0.705357
msrB BPP3349 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; chromosome CDS3606685 402 + 0.626866
mucD BPP3298 serine proteaseSubName: Full=Serine protease; chromosome CDS3556670 1488 - 0.683468
osmC BPP1969 osmotically inducible protein CSubName: Full=Osmotically inducible protein C; chromosome CDS2106361 426 - 0.643192
pcm BPP3056 protein-L-isoaspartate O-methyltransferaseRecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; Short=PIMT; chromosome CDS3295168 780 - 0.714103
ppiB BPP2281 peptidyl-prolyl cis-trans isomerase BRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS2428690 510 - 0.601961
ppiD BPP3044 peptidyl-prolyl cis-trans isomerase DSubName: Full=Peptidyl-prolyl cis-trans isomerase D; EC=5.2.1.8; chromosome CDS3283176 2016 - 0.700397
radA BPP1840 DNA repair proteinRecName: Full=DNA repair protein radA; chromosome CDS1963291 1362 + 0.699706
smpB BPP1549 SsrA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS1657143 468 - 0.611111
sspA BPP4286 stringent starvation protein ASubName: Full=Stringent starvation protein A; chromosome CDS4621090 612 + 0.604575
tig BPP2005 trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS2143315 1311 + 0.665904
trxA BPP1878 thioredoxin 1SubName: Full=Thioredoxin 1; chromosome CDS2009737 426 - 0.615023
trxB BPP3463 thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS3742472 987 + 0.657548
trxB BPP4293 thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS4626623 954 - 0.688679
trxC BPP3062 thioredoxin 2RecName: Full=Thioredoxin; chromosome CDS3301342 384 + 0.653646
ureD BPP3859 urease accessory proteinRecName: Full=Urease accessory protein UreD; chromosome CDS4177451 855 - 0.719298
ureE BPP3854 urease accessory proteinRecName: Full=Urease accessory protein UreE; chromosome CDS4173729 618 - 0.70712
ureF BPP3853 urease accessory proteinRecName: Full=Urease accessory protein UreF; chromosome CDS4173044 663 - 0.730015
ureG BPP3852 urease accessory proteinRecName: Full=Urease accessory protein UreG; chromosome CDS4172375 645 - 0.631008
ureJ BPP3857 urease accessory proteinSubName: Full=Urease accessory protein; chromosome CDS4176386 618 - 0.710356