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2024-05-14 07:58:21

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Bordetella pertussis, Tohama I

Number of genes found: 107

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Bordetella pertussis, Tohama I
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BP1837 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1930257 255 + 0.686275
NA BP3394 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3603308 447 + 0.666667
NA BP3330 putative peptidyl-prolyl cis-trans isomeraseRecName: Full=Chaperone SurA; AltName: Full=Peptidyl-prolyl cis-trans isomerase SurA; Short=PPIase SurA; EC=5.2.1.8; AltName: Full=Rotamase SurA; Flags: Precursor; chromosome CDS3551010 1560 + 0.696154
NA BP2333 putative dioxygenaseSubName: Full=Putative dioxygenase; chromosome CDS2468748 927 + 0.640777
NA BP3652 putative cytochrome c asssembly proteinSubName: Full=Putative cytochrome c asssembly protein; chromosome CDS3856428 1335 + 0.666667
NA BP1238 putative glutathione-S-transferaseSubName: Full=Putative glutathione-S-transferase; chromosome CDS1300308 645 + 0.665116
NA BP2999 thioredoxinSubName: Full=Thioredoxin; chromosome CDS3190094 570 - 0.64386
NA BP1728 putative glutaredoxinSubName: Full=Putative glutaredoxin; chromosome CDS1811284 729 + 0.62963
NA BP1525 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1598350 480 + 0.714583
NA BP2957 conserved hypothetical proteinRecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; chromosome CDS3145459 1137 + 0.740545
NA BP1829 lipoproteinSubName: Full=Lipoprotein; chromosome CDS1919940 1578 + 0.742079
NA BP3735 UbiA prenyltransferase family proteinRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome CDS3944176 894 - 0.671141
NA BP1307 putative bacterioferritin comigratory proteinSubName: Full=Putative bacterioferritin comigratory protein; chromosome CDS1376087 540 - 0.67037
NA BP2379 putative chaperoninRecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33 homolog; chromosome CDS2518514 915 + 0.671038
NA BP0177 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS176367 528 + 0.712121
NA BP1301 glutathione peroxidaseRecName: Full=Glutathione peroxidase; chromosome CDS1370218 501 - 0.680639
NA BP2715 AhpC/TSA-family proteinSubName: Full=AhpC/TSA-family protein; chromosome CDS2881277 504 + 0.680556
NA BP2171 putative cytochrome C oxidase subunit (periplasmic protein)SubName: Full=Putative cytochrome C oxidase subunit (Periplasmic protein); chromosome CDS2292500 177 + 0.59887
NA BP2891 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3067005 612 + 0.647059
NA BP3659 putative glutathione S-transferaseSubName: Full=Putative glutathione S-transferase; chromosome CDS3865316 660 - 0.690909
NA BP0075 probable glutathione S-transferaseSubName: Full=Probable glutathione S-transferase; chromosome CDS73706 621 - 0.695652
NA BP0386 putative thioredoxinSubName: Full=Putative thioredoxin; chromosome CDS387082 492 - 0.621951
NA BP1270 putative glutathione S-transferaseSubName: Full=Putative glutathione S-transferase; EC=2.5.1.18; chromosome CDS1344075 639 - 0.710485
NA BP0178 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS176986 816 + 0.745098
NA BP0899 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS934043 1818 - 0.678218
NA BP2106 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2230141 303 - 0.70297
NA BP2688 putative integral membrane zinc-metalloproteaseSubName: Full=Putative integral membrane zinc-metalloprotease; chromosome CDS2851951 1266 + 0.684834
NA BP3651 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS3854325 2094 + 0.665712
NA BP3599 putative protein-L-isoaspartate O-methyltransferaseSubName: Full=Uncharacterized protein; chromosome CDS3816383 681 + 0.647577
NA BP3217 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3429066 393 - 0.656489
NA BP1463 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS1539595 837 + 0.695341
NA BP1006 probable glutathione S-transferaseSubName: Full=Probable glutathione S-transferase; chromosome CDS1053431 642 - 0.733645
NA BP2336 conserved hypothetical proteinRecName: Full=Probable Fe(2+)-trafficking protein; chromosome CDS2475300 273 + 0.6337
NA BP1300 putative glutathione transferaseSubName: Full=Putative glutathione transferase; EC=2.5.1.18; chromosome CDS1369407 702 - 0.672365
NA BP2500 putative thioredoxinSubName: Full=Putative thioredoxin; chromosome CDS2649875 381 - 0.685039
NA BP3818 type 4 prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS4026411 981 - 0.722732
NA BP1992 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS2104425 525 + 0.68381
NA BP0262 probable ATP-binding component of ABC transporterSubName: Full=Probable ATP-binding component of ABC transporter; chromosome CDS270796 1752 + 0.744292
NA BP0680 conserved hypothetical proteinRecName: Full=Glutaredoxin; chromosome CDS696458 327 + 0.593272
NA BP2734 putative chelatase (Pseudogene) chromosome CDS2901042 1502 - 0.757656
NA BP2501 putative GrpE chaperoneRecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS2650263 555 - 0.697297
NA BP3736 putative cytochrome oxidase assembly proteinSubName: Full=Putative cytochrome oxidase assembly protein; chromosome CDS3945080 1032 - 0.678295
NA BP3561 putative peptidyl-prolyl cis-trans isomeraseRecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans isomerase; Short=PPIase; EC=5.2.1.8; AltName: Full=Protein p13; AltName: Full=Rotamase; Flags: Precursor; chromosome CDS3776648 777 - 0.612613
NA BP0965 antioxidant proteinSubName: Full=Antioxidant protein; EC=3.1.1.-; chromosome CDS1003232 642 + 0.61838
NA BP3153 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3364209 438 + 0.675799
NA BP3275 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3492023 903 + 0.724252
NA BP0576 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS583268 996 - 0.71988
NA BP1440 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1515632 927 + 0.651564
NA BP2659 conserved hypothetical proteinRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS2815531 633 + 0.690363
NA BP3041 putative methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS3241440 561 - 0.654189
NA BP2282 heat shock proteaseRecName: Full=Protease HtpX homolog; EC=3.4.24.-; chromosome CDS2403398 882 + 0.675737
NA BP2787 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2961985 465 + 0.610753
NA BP3270 putative thiol:disulphide interchange protein (periplasmic)RecName: Full=Probable thiol:disulfide interchange protein DsbC; Flags: Precursor; chromosome CDS3487649 840 + 0.667857
NA BP0450 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS455327 246 - 0.699187
NA BP0520 putative exported proteinSubName: Full=Putative exported protein; chromosome CDS526740 861 + 0.658537
NA BP2128 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2252991 1062 + 0.757062
NA BP3646 thiol:disulfide interchange proteinRecName: Full=Thiol:disulfide interchange protein DsbD; EC=1.8.1.8; AltName: Full=Protein-disulfide reductase; Flags: Precursor; chromosome CDS3848631 1938 + 0.704334
NA BP3443 conserved hypothetical proteinRecName: Full=Putative arginyl-tRNA--protein transferase; Short=Arginyltransferase; Short=R-transferase; EC=2.3.2.8; chromosome CDS3654752 735 - 0.673469
ahpC BP3552 alkyl hydroperoxide reductaseSubName: Full=Alkyl hydroperoxide reductase; chromosome CDS3763216 549 - 0.595628
cbpA BP1011 curved DNA-binding proteinSubName: Full=Curved DNA-binding protein; chromosome CDS1056816 939 + 0.711395
clpA BP2753 ATP-dependent clp protease ATP-bindingSubName: Full=ATP-dependent clp protease ATP-binding; chromosome CDS2924368 2316 - 0.654577
clpB BP1198 ATP-dependent protease, ATPase subunitRecName: Full=Chaperone protein ClpB; chromosome CDS1258261 2598 + 0.664357
clpP BP1775 ATP-dependent Clp protease proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1864621 654 + 0.633027
clpX BP1776 ATP-dependent Clp protease ATP-binding subunitRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS1865379 1305 + 0.636015
cpn10 BP3496 10 kDa chaperoninRecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS3707869 288 - 0.628472
cpn60 BP3495 60 kDa chaperoninRecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS3706193 1644 - 0.644769
cyaC BP0758 cyclolysin-activating lysine-acyltransferaseRecName: Full=Cyclolysin-activating lysine-acyltransferase CyaC; EC=2.3.1.-; chromosome CDS775192 558 - 0.679211
degQ BP0280 proteaseSubName: Full=Protease; EC=3.4.21.-; chromosome CDS284999 1137 + 0.713281
dnaJ BP2498 molecular chaperoneRecName: Full=Chaperone protein DnaJ; chromosome CDS2646601 1158 - 0.670984
dnaK BP2499 molecular chaperoneRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS2647859 1926 - 0.642783
dsbA BP0113 thiol:disulfide interchange protein DsbA precursorRecName: Full=Thiol:disulfide interchange protein DsbA; Flags: Precursor; chromosome CDS110553 630 - 0.666667
dsbB BP1416 disulfide bond formation protein BSubName: Full=Disulfide bond formation protein B; chromosome CDS1488756 477 - 0.685535
fkpB BP1236 FkbP-type peptidyl-prolyl cis-trans isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1298837 456 + 0.671053
flgA BP1372 flagella basal body P-ring formation proteinSubName: Full=Flagella basal body P-ring formation protein; chromosome CDS1448344 711 - 0.735584
flgJ BP1381 peptidoglycan hydrolaseSubName: Full=Peptidoglycan hydrolase; EC=3.2.1.-; chromosome CDS1455791 1023 + 0.7087
fliJ BP1399 flagellar protein FliJSubName: Full=Flagellar protein FliJ; chromosome CDS1473485 447 - 0.651007
fliS BP1409 flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS1481877 429 - 0.666667
ftsH BP1077 cell division proteinRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS1125892 1887 - 0.660837
gcp BP1716 probable glycoproteaseRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS1800688 1041 + 0.716619
glnD BP1417 [protein-PII] uridylyltransferaseRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; Includes: RecName: Full=[Protein-PII] uridylyltransferase; Short=PII uridylyltransferase; Short=UTase; EC=2.7.7.59; Includes: RecName: Full=[Protein-PII]-UMP uridylyl-removing enzyme; Short=UR; EC=3.1.4.-; chromosome CDS1490036 2598 - 0.702463
glnE BP1260 glutamate-ammonia-ligase adenylyltransferaseRecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthetase adenylyltransferase; Short=ATase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; chromosome CDS1327653 2883 - 0.708984
grxC BP0605 glutaredoxin 3SubName: Full=Glutaredoxin 3; chromosome CDS610652 261 - 0.643678
gst BP1664 glutathione S-transferaseSubName: Full=Glutathione S-transferase; EC=2.5.1.18; chromosome CDS1751125 624 - 0.692308
hflC BP2190 putative inner membrane-anchored proteinRecName: Full=Protein HflC; chromosome CDS2311328 900 - 0.661111
hflK BP2191 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS2312246 1305 - 0.649808
hscA BP1803 chaperone proteinRecName: Full=Chaperone protein HscA homolog; chromosome CDS1892356 1863 + 0.717123
hscB BP1802 chaperone proteinRecName: Full=Co-chaperone protein HscB homolog; chromosome CDS1891714 513 + 0.682261
hslU BP3087 ATP-dependent Hsl protease ATP-binding subunitRecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome CDS3288521 1335 + 0.641948
hslV BP3086 ATP-dependent protease heat shock proteinRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome CDS3287960 540 + 0.655556
htpG BP0074 heat shock proteinRecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS71637 1908 + 0.647275
lon BP1777 ATP-dependent protease LaRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS1866872 2454 + 0.631622
msrB BP3564 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; chromosome CDS3778322 402 - 0.629353
mucD BP2434 serine proteaseSubName: Full=Serine protease; chromosome CDS2577051 1488 - 0.681452
pcm BP1720 protein-L-isoaspartate O-methyltransferaseRecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; chromosome CDS1804767 639 + 0.697966
ppiB BP1906 peptidyl-prolyl cis-trans isomerase BRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS2008955 510 - 0.601961
ppiD BP1732 peptidyl-prolyl cis-trans isomerase DSubName: Full=Peptidyl-prolyl cis-trans isomerase D; EC=5.2.1.8; chromosome CDS1815433 1956 + 0.703988
radA BP1227 DNA repair proteinRecName: Full=DNA repair protein radA; chromosome CDS1290181 1362 + 0.696035
smpB BP1442 SsrA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS1517762 468 - 0.608974
sspA BP0274 stringent starvation protein ASubName: Full=Stringent starvation protein A; chromosome CDS279814 612 - 0.604575
tig BP1774 trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS1863308 1311 + 0.663616
trxA BP1263 thioredoxin 1SubName: Full=Thioredoxin 1; chromosome CDS1335621 426 - 0.615023
trxB BP2474 thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS2618572 960 + 0.657292
trxC BP1713 thioredoxin 2RecName: Full=Thioredoxin; chromosome CDS1797518 384 - 0.651042
ureD BP3172 urease accessory proteinRecName: Full=Urease accessory protein UreD; chromosome CDS3383940 855 - 0.719298
ureE BP3167A urease accessory proteinRecName: Full=Urease accessory protein UreE; chromosome CDS3380218 615 - 0.707317
ureG BP3166 urease accessory proteinRecName: Full=Urease accessory protein UreG; chromosome CDS3378864 645 - 0.632558
ureJ BP3170 urease accessory proteinSubName: Full=Urease accessory protein; chromosome CDS3382875 609 - 0.714286