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2024-05-09 01:26:55

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 139

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0018 16 kDa heat shock protein Achromosome I CDS14769 438 + 0.456621
VC0024 conserved hypothetical proteinchromosome I CDS21287 249 - 0.48996
VC0032 ComM-related proteinchromosome I CDS30069 1524 + 0.536089
VC0034 thiol:disulfide interchange proteinchromosome I CDS32644 603 - 0.461028
VC0157 alkaline serine proteasechromosome I CDS147278 1608 - 0.466418
VC0306 thioredoxinchromosome I CDS317772 327 + 0.480122
VC0349 hflK proteinchromosome I CDS371780 1188 + 0.494949
VC0350 hflC proteinchromosome I CDS372970 981 + 0.468909
VC0354 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome I CDS375590 780 + 0.469231
VC0445 survival protein SurAchromosome I CDS473534 1296 - 0.482253
VC0447 DnaJ-related proteinchromosome I CDS477392 855 + 0.502924
VC0451 conserved hypothetical proteinchromosome I CDS482912 273 - 0.457875
VC0457 hypothetical proteinchromosome I CDS488311 432 - 0.476852
VC0532 protein-L-isoaspartate O-methyltransferasechromosome I CDS563097 627 + 0.510367
VC0539 sulfate ABC transporter, permease proteinchromosome I CDS571037 852 + 0.514085
VC0565 protease DegSchromosome I CDS598403 1059 - 0.490085
VC0566 protease DOchromosome I CDS599638 1371 - 0.479212
VC0576 stringent starvation protein Achromosome I CDS606911 636 + 0.435535
VC0637 cell division protein FtsHchromosome I CDS678104 1956 + 0.478528
VC0651 conserved hypothetical proteinchromosome I CDS695344 966 - 0.484472
VC0652 protease, putativechromosome I CDS696234 1014 - 0.500986
VC0684 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome I CDS732230 435 + 0.503448
VC0691 conserved hypothetical proteinchromosome I CDS738656 1113 - 0.537287
VC0711 clpB proteinchromosome I CDS759675 2574 + 0.496115
VC0717 protease, putativechromosome I CDS769565 1401 - 0.49536
VC0731 antioxidant, AhpC/Tsa familychromosome I CDS786666 624 - 0.461538
VC0751 chaperone protein HscBchromosome I CDS803268 516 + 0.482558
VC0752 chaperone protein HscAchromosome I CDS803807 1851 + 0.525662
VC0824 tagD proteinchromosome I CDS885773 495 + 0.391919
VC0839 leader peptidase TcpJchromosome I CDS900726 762 + 0.314961
VC0848 small protein Bchromosome I CDS914726 486 - 0.483539
VC0854 heat shock protein GrpEchromosome I CDS919557 603 + 0.494196
VC0855 dnaK proteinchromosome I CDS920423 1908 + 0.483753
VC0856 dnaJ proteinchromosome I CDS922531 1146 + 0.516579
VC0975 conserved hypothetical proteinchromosome I CDS1040356 570 - 0.482456
VC0976 conserved hypothetical proteinchromosome I CDS1040813 921 - 0.45494
VC0977 conserved hypothetical proteinchromosome I CDS1042164 921 - 0.456026
VC0982 selenoprotein W-related proteinchromosome I CDS1046275 294 - 0.496599
VC0985 heat shock protein HtpGchromosome I CDS1048252 1908 + 0.457547
VC1060 sohB protein, peptidase U7 familychromosome I CDS1127705 1071 + 0.490196
VC1096 conserved hypothetical proteinchromosome I CDS1164422 948 + 0.472574
VC1117 heat shock protein HtpXchromosome I CDS1186157 864 + 0.494213
VC1144 ATP-dependent Clp protease, ATP-binding subunit ClpAchromosome I CDS1213029 2271 + 0.48657
VC1146 glutaredoxin 1chromosome I CDS1217246 279 - 0.44086
VC1162 hypothetical proteinchromosome I CDS1234157 738 - 0.490515
VC1180 transport ATP-binding protein CydCchromosome I CDS1251995 1722 - 0.518002
VC1181 transport ATP-binding protein CydDchromosome I CDS1253709 1788 - 0.50783
VC1182 thioredoxin reductasechromosome I CDS1255616 957 - 0.504702
VC1194 conserved hypothetical proteinchromosome I CDS1266731 1053 - 0.468186
VC1199 conserved hypothetical proteinchromosome I CDS1273414 468 + 0.482906
VC1200 trypsin, putativechromosome I CDS1274131 1212 + 0.44802
VC1236 PilB-related proteinchromosome I CDS1310478 447 + 0.494407
VC1347 glutathione S-transferase, putativechromosome I CDS1434725 648 + 0.487654
VC1350 antioxidant, putativechromosome I CDS1440716 474 - 0.466245
VC1365 conserved hypothetical proteinchromosome I CDS1454744 738 + 0.479675
VC1374 DnaK-related proteinchromosome I CDS1466367 1896 - 0.526899
VC1386 heat shock protein 70 family proteinchromosome I CDS1477679 1353 + 0.527716
VC1440 cytochrome c oxidase, subunit CcoQchromosome I CDS1537317 165 - 0.430303
VC1442 cytochrome c oxidase, subunit CcoNchromosome I CDS1538127 1434 - 0.47629
VC1450 RTX toxin activating proteinchromosome I CDS1549662 462 + 0.491342
VC1482 ATP-dependent protease LA-related proteinchromosome I CDS1586564 1797 + 0.437396
VC1487 conserved hypothetical proteinchromosome I CDS1592963 243 - 0.411523
VC1616 glutaredoxin, putativechromosome I CDS1729725 234 + 0.440171
VC1649 trypsin, putativechromosome I CDS1774844 1647 - 0.425015
VC1663 heat shock protein HslJchromosome I CDS1794806 444 + 0.470721
VC1735 leucyl/phenylalanyl-tRNA--protein transferasechromosome I CDS1872072 732 + 0.505464
VC1736 arginyl-tRNA-protein transferase-related proteinchromosome I CDS1872807 702 + 0.462963
VC1849 peptidyl-prolyl cis-trans isomerase Bchromosome I CDS1988801 495 + 0.460606
VC1869 pyruvate formate-lyase 1 activating enzymechromosome I CDS2012625 741 + 0.461538
VC1902 disulfide bond formation protein Bchromosome I CDS2051224 522 + 0.488506
VC1918 peptidyl-prolyl cis-trans isomerse Dchromosome I CDS2066898 1860 - 0.460215
VC1920 ATP-dependent protease LAchromosome I CDS2069366 2361 - 0.489199
VC1921 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome I CDS2071849 1281 - 0.47541
VC1922 ATP-dependent Clp protease, proteolytic subunitchromosome I CDS2073209 603 - 0.464345
VC1923 trigger factorchromosome I CDS2073941 1302 - 0.479263
VC1989 conserved hypothetical proteinchromosome I CDS2140716 714 - 0.526611
VC1994 protease IVchromosome I CDS2147068 1851 + 0.488925
VC1998 PilB-related proteinchromosome I CDS2151522 444 - 0.443694
VC2044 conserved hypothetical proteinchromosome I CDS2202606 333 - 0.48048
VC2051 thiol:disulfide interchange protein DsbEchromosome I CDS2207961 555 - 0.45045
VC2052 cytochrome c-type biogenesis protein CcmFchromosome I CDS2208516 1956 - 0.498466
VC2053 cytochrome c-type biogenesis protein CcmEchromosome I CDS2210468 483 - 0.478261
VC2055 heme exporter protein Cchromosome I CDS2211153 753 - 0.504648
VC2056 heme exporter protein Bchromosome I CDS2211996 669 - 0.494768
VC2057 heme exporter protein Achromosome I CDS2212661 624 - 0.471154
VC2072 peptidase, insulinase familychromosome I CDS2227373 2820 + 0.475887
VC2129 flagellar protein FliJ, putativechromosome I CDS2282851 495 - 0.460606
VC2138 flagellar protein FliSchromosome I CDS2293010 411 - 0.462287
VC2160 bacterioferritin comigratory proteinchromosome I CDS2308172 468 + 0.455128
VC2163 conserved hypothetical proteinchromosome I CDS2311860 237 - 0.485232
VC2192 flagellar protein FlgJchromosome I CDS2339463 939 - 0.487753
VC2203 flagellar protein, putativechromosome I CDS2349043 768 + 0.457031
VC2205 hypothetical proteinchromosome I CDS2350362 432 + 0.449074
VC2262 protein-P-II uridylyltransferasechromosome I CDS2417392 2646 + 0.492819
VC2280 hypothetical proteinchromosome I CDS2435761 444 + 0.463964
VC2299 peptidyl-prolyl cis-trans isomerase Achromosome I CDS2453446 585 + 0.48547
VC2343 DNA repair protein RadAchromosome I CDS2497754 1380 - 0.492754
VC2418 thiol:disulfide interchange protein DsbCchromosome I CDS2592606 753 - 0.505976
VC2426 leader peptidase PilDchromosome I CDS2600669 876 + 0.515982
VC2438 glutamate-ammonia-ligase adenylyltransferasechromosome I CDS2613465 2847 - 0.517387
VC2549 peptide methionine sulfoxide reductasechromosome I CDS2732684 639 + 0.538341
VC2568 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome I CDS2749721 630 + 0.504762
VC2604 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome I CDS2773919 606 - 0.523102
VC2637 peroxiredoxin family protein/glutaredoxinchromosome I CDS2809306 744 + 0.469086
VC2664 chaperonin, 60 Kd subunitchromosome I CDS2832620 1635 - 0.521713
VC2665 chaperonin, 10 Kd subunitchromosome I CDS2834308 291 - 0.446735
VC2674 protease HslVU, ATPase subunit HslUchromosome I CDS2841224 1332 - 0.503003
VC2675 protease HslVU, subunit HslVchromosome I CDS2842621 558 - 0.514337
VC2701 thiol:disulfide interchange protein DsbDchromosome I CDS2871996 1803 + 0.517471
VC2720 conserved hypothetical proteinchromosome I CDS2894731 588 + 0.511905
VC2736 conserved hypothetical proteinchromosome I CDS2908788 891 + 0.496072
VCA0065 hypothetical proteinchromosome II CDS73023 2307 + 0.503251
VCA0096 hypothetical proteinchromosome II CDS103162 1224 + 0.464052
VCA0116 clpB proteinchromosome II CDS126178 2610 + 0.509579
VCA0222 lipase activator protein, putativechromosome II CDS243056 855 + 0.529825
VCA0330 hypothetical proteinchromosome II CDS332490 489 + 0.413088
VCA0496 glutathione S-transferase, putativechromosome II CDS430170 681 + 0.405286
VCA0512 anaerobic ribonucleoside-triphosphate reductase activating proteinchromosome II CDS442416 468 + 0.480769
VCA0514 hypothetical proteinchromosome II CDS444244 684 + 0.482456
VCA0581 conserved hypothetical proteinchromosome II CDS519996 792 + 0.483586
VCA0584 glutathione S-transferase, putativechromosome II CDS522368 669 - 0.48281
VCA0585 glutathione S-transferase, putativechromosome II CDS523048 612 - 0.45098
VCA0615 peptide methionine sulfoxide reductasechromosome II CDS549956 1185 + 0.470886
VCA0661 peptidyl-prolyl cis-trans isomerase-related proteinchromosome II CDS597218 474 + 0.472574
VCA0752 thioredoxin 2chromosome II CDS696838 435 + 0.478161
VCA0788 DnaJ-related proteinchromosome II CDS732773 630 - 0.469841
VCA0803 serine protease, putativechromosome II CDS745355 993 - 0.460222
VCA0812 leucine aminopeptidase-related proteinchromosome II CDS757265 1431 + 0.470999
VCA0819 chaperonin, 10 Kd subunitchromosome II CDS765822 291 + 0.457045
VCA0820 chaperonin, 60 Kd subunitchromosome II CDS766141 1593 + 0.514752
VCA0838 conserved hypothetical proteinchromosome II CDS783290 405 - 0.479012
VCA0901 hypothetical proteinchromosome II CDS855370 630 + 0.503175
VCA0928 hypothetical proteinchromosome II CDS881489 510 + 0.454902
VCA0949 SM-20-related proteinchromosome II CDS900115 618 - 0.467638
VCA0953 peptidyl-prolyl cis-trans isomerase Cchromosome II CDS902678 279 - 0.46595
VCA0975 ATP-dependent protease LA-related proteinchromosome II CDS921798 2361 - 0.481152
VCA0992 glutaredoxin 2chromosome II CDS946431 657 + 0.461187
VCA1006 organic hydroperoxide resistance protein, putativechromosome II CDS958488 438 + 0.522831
VCA1011 glutaredoxin-related proteinchromosome II CDS961260 639 + 0.475743