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2024-05-03 15:24:48

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Mycobacterium bovis AF2122/97, AF2122/97

Number of genes found: 110

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Mycobacterium bovis AF2122/97, AF2122/97
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
Mb0204c Mb0204c PROBABLE ZINC METALLOPROTEASEchromosome CDS234712 1992 - 0.636546
Mb0290 Mb0290 CONSERVED HYPOTHETICAL PROTEINchromosome CDS343132 1896 + 0.648734
Mb0299 Mb0299 PROBABLE PROTEASE PRECURSORchromosome CDS355500 1386 + 0.701299
Mb0320 Mb0320 CONSERVED HYPOTHETICAL PROLINE AND THREONINE RICH PROTEINchromosome CDS381586 1863 + 0.657005
Mb0379c Mb0379c CONSERVED HYPOTHETICAL PROTEINchromosome CDS449647 756 - 0.698413
Mb0383c Mb0383c CONSERVED HYPOTHETICAL PROTEINchromosome CDS454247 1143 - 0.696413
Mb0443c Mb0443c PUTATIVE CONSERVED ATPASEchromosome CDS523366 2187 - 0.689986
Mb0491c Mb0491c HYPOTHETICAL PROTEINchromosome CDS570951 525 - 0.622857
Mb0520 Mb0520 CONSERVED HYPOTHETICAL PROTEINchromosome CDS601249 294 + 0.636054
Mb0531 Mb0531 POSSIBLE EXPORTED PROTEINchromosome CDS611339 696 + 0.656609
Mb0539 Mb0539 POSSIBLE THIOREDOXIN PROTEIN (THIOL-DISULFIDE INTERCHANGE PROTEIN)chromosome CDS617996 651 + 0.677419
Mb0541 Mb0541 PROBABLE CONSERVED TRANSMEMBRANE PROTEINchromosome CDS619455 1590 + 0.7
Mb0810 Mb0810 HYPOTHETICAL PROTEINchromosome CDS883649 960 + 0.672917
Mb1009 Mb1009 PROBABLE SERINE PROTEASE (SERINE PROTEINASE)chromosome CDS1099517 1395 + 0.667383
Mb1017c Mb1017c HYPOTHETICAL PROTEINchromosome CDS1107894 657 - 0.687976
Mb1029c Mb1029c CONSERVED MEMBRANE PROTEINchromosome CDS1118879 1512 - 0.66336
Mb1072c Mb1072c CONSERVED HYPOTHETICAL PROTEINchromosome CDS1166229 1026 - 0.641326
Mb1113 Mb1113 CONSERVED HYPOTHETICAL PROTEINchromosome CDS1208996 2022 + 0.71909
Mb1204 Mb1204 CONSERVED HYPOTHETICAL PROTEINchromosome CDS1302680 441 + 0.657596
Mb1248c Mb1248c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEINchromosome CDS1360714 675 - 0.598518
Mb1359 Mb1359 POSSIBLE THIOREDOXINchromosome CDS1485196 915 + 0.655738
Mb1491c Mb1491c PROBABLE UNIDENTIFIED ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE ABC TRANSPORTERchromosome CDS1638239 933 - 0.687031
Mb1497 Mb1497 CONSERVED HYPOTHETICAL PROTEINchromosome CDS1646272 1194 + 0.676717
Mb1498 Mb1498 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTERchromosome CDS1647462 801 + 0.651685
Mb1523 Mb1523 CONSERVED MEMBRANE PROTEINchromosome CDS1673687 435 + 0.671264
Mb1524 Mb1524 POSSIBLE EXPORTED CONSERVED PROTEINchromosome CDS1674143 1146 + 0.665794
Mb1761c Mb1761c CONSERVED HYPOTHETICAL PROTEINchromosome CDS1944640 549 - 0.695811
Mb1824 Mb1824 CONSERVED HYPOTHETICAL PRO-RICH PROTEASEchromosome CDS2024184 1758 + 0.656428
Mb1826 Mb1826 CONSERVED HYPOTHETICAL PROTEINchromosome CDS2027155 1833 + 0.634479
Mb1876c Mb1876c CONSERVED HYPOTHETICAL TRANSMEMBRANE PROTEINchromosome CDS2085428 951 - 0.721346
Mb2070c Mb2070c CONSERVED HYPOTHETICAL PROTEINchromosome CDS2273195 318 - 0.641509
Mb2139c Mb2139c Probable ATPasechromosome CDS2354886 1830 - 0.620765
Mb2287c Mb2287c conserved hypothetical proline rich proteinchromosome CDS2515526 1779 - 0.690838
Mb2463 Mb2463 CONSERVED HYPOTHETICAL PROTEINchromosome CDS2702539 420 + 0.640476
Mb2570 Mb2570 HYPOTHETICAL ALANINE RICH PROTEINchromosome CDS2831224 408 + 0.781863
Mb2581c Mb2581c CONSERVED HYPOTHETICAL PROTEINchromosome CDS2838228 420 - 0.735714
Mb2693 Mb2693 CONSERVED HYPOTHETICAL PROTEINchromosome CDS2947240 411 + 0.632603
Mb2706c Mb2706c PROBABLE ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE LEUCINE AND VALINE RICH PROTEIN ABC TRANSPORTERchromosome CDS2960671 714 - 0.644258
Mb2902c Mb2902c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEINchromosome CDS3144524 864 - 0.677083
Mb2921c Mb2921c CONSERVED HYPOTHETICAL PROTEINchromosome CDS3162947 1512 - 0.689815
Mb2948c Mb2948c CONSERVED HYPOTHETICAL PROTEINchromosome CDS3194714 414 - 0.678744
Mb2993c Mb2993c POSSIBLE CONSERVED MEMBRANE OR SECRETED PROTEINchromosome CDS3280398 768 - 0.632812
Mb3117 Mb3117 HYPOTHETICAL ALANINE AND VALINE RICH PROTEINchromosome CDS3414758 888 + 0.628378
Mb3223 Mb3223 POSSIBLE GLUTAREDOXIN PROTEINchromosome CDS3525880 255 + 0.580392
Mb3266c Mb3266c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEINchromosome CDS3568264 735 - 0.610884
Mb3455c Mb3455c CONSERVED HYPOTHETICAL PROTEINchromosome CDS3791687 636 - 0.701258
Mb3479 Mb3479 PROBABLE SECRETED SERINE PROTEASEchromosome CDS3817453 1368 + 0.690789
Mb3695c Mb3695c PUTATIVE MEMBRANE-ASSOCIATED SERINE PROTEASEchromosome CDS4049669 1194 - 0.663317
Mb3697c Mb3697c POSSIBLE MEMBRANE-ANCHORED THIOREDOXIN-LIKE PROTEIN (THIOL-DISULFIDE INTERCHANGE RELATED PROTEIN)chromosome CDS4051821 684 - 0.697368
Mb3898 Mb3898 CONSERVED HYPOTHETICAL PROTEINchromosome CDS4279634 1722 + 0.643438
Mb3913c Mb3913c POSSIBLE SECRETED PROTEASEchromosome CDS4299782 1341 - 0.688292
Mb3914c Mb3914c PUTATIVE CBXX/CFQX FAMILY PROTEINchromosome CDS4301344 1860 - 0.627419
Mb3916c Mb3916c POSSIBLE SECRETED ALANINE AND PROLINE RICH PROTEASEchromosome CDS4304883 1653 - 0.679371
ahpC Mb2454 ALKYL HYDROPEROXIDE REDUCTASE C PROTEIN AHPC (ALKYL HYDROPEROXIDASE C)chromosome CDS2694356 588 + 0.607143
ahpE Mb2262c peroxiredoxin AhpEchromosome CDS2489863 462 - 0.627706
bcp Mb2550 PROBABLE BACTERIOFERRITIN COMIGRATORY PROTEIN BCPchromosome CDS2804481 474 + 0.626582
bcpB Mb1634c Probable peroxidoxin bcpBchromosome CDS1792664 465 - 0.612903
ccdA Mb0540 POSSIBLE CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCDAchromosome CDS618643 780 + 0.692308
ccsA Mb0542 POSSIBLE CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCSAchromosome CDS621041 975 + 0.681026
clpB Mb0391c PROBABLE ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB PROTEIN) (HEAT SHOCK PROTEIN F84.1)chromosome CDS460473 2547 - 0.685905
clpC Mb3627c PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPCchromosome CDS3981399 2547 - 0.646643
clpP1 Mb2488c PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 CLPP1 (ENDOPEPTIDASE CLP)chromosome CDS2731335 603 - 0.621891
clpP2 Mb2487c PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 2 CLPP2 (ENDOPEPTIDASE CLP 2)chromosome CDS2730694 645 - 0.617054
clpX Mb2484c PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPXchromosome CDS2726371 1281 - 0.615925
clpX' Mb2686 POSSIBLE ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPX'chromosome CDS2940375 759 + 0.675889
ctaB Mb1486 PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR CTABchromosome CDS1631613 927 + 0.660194
cydD Mb1647c PROBABLE 'COMPONENT LINKED WITH THE ASSEMBLY OF CYTOCHROME' TRANSPORT TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER CYDDchromosome CDS1807056 1584 - 0.686237
cysT Mb2421c PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER CYSTchromosome CDS2663865 852 - 0.643192
dipZ Mb2899 POSSIBLE INTEGRAL MEMBRANE C-TYPE CYTOCHROME BIOGENESIS PROTEIN DIPZchromosome CDS3141363 2088 + 0.624042
dnaJ1 Mb0360 PROBABLE CHAPERONE PROTEIN DNAJ1chromosome CDS423481 1188 + 0.675926
dnaJ2 Mb2394c PROBABLE CHAPERONE PROTEIN DNAJ2chromosome CDS2620910 1149 - 0.679721
dnaK Mb0358 PROBABLE CHAPERONE PROTEIN DNAK (HEAT SHOCK PROTEIN 70) (HEAT SHOCK 70 KDA PROTEIN) (HSP70)chromosome CDS420864 1878 + 0.63525
dsbF Mb1704 PROBABLE CONSERVED LIPOPROTEIN DSBFchromosome CDS1887144 549 + 0.637523
ftsH Mb3640c MEMBRANE-BOUND PROTEASE FTSH (CELL DIVISION PROTEIN)chromosome CDS3993842 2283 - 0.657906
gcp Mb3453c PROBABLE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE GCP (GLYCOPROTEASE)chromosome CDS3790183 1035 - 0.688889
glnD Mb2942c PROBABLE [PROTEIN-PII] URIDYLYLTRANSFERASE GLND (PII URIDYLYL-TRANSFERASE) (URIDYLYL REMOVING ENZYME) (UTASE)chromosome CDS3184770 2427 - 0.666667
glnE Mb2245c GLUTAMATE-AMMONIA-LIGASE ADENYLYLTRANSFERASE GLNE (Glutamine-synthetase adenylyltransferase)chromosome CDS2468516 2985 - 0.685092
groEL1 Mb3451c 60 KDA CHAPERONIN 1 GROEL1 (PROTEIN CPN60-1) (GROEL PROTEIN 1)chromosome CDS3787900 1620 - 0.651235
groEL2 Mb0448 60 KDA CHAPERONIN 2 GROEL2 (PROTEIN CPN60-2) (GROEL PROTEIN 2) (65 KDA ANTIGEN) (HEAT SHOCK PROTEIN 65) (CELL WALL PROTEIN A) (ANTIGEN A)chromosome CDS529627 1623 + 0.653728
groES Mb3452c 10 KDA CHAPERONIN GROES (PROTEIN CPN10) (PROTEIN GROES) (BCG-A HEAT SHOCK PROTEIN) (10 KDA ANTIGEN)chromosome CDS3789614 303 - 0.633663
grpE Mb0359 PROBABLE GRPE PROTEIN (HSP-70 COFACTOR)chromosome CDS422738 708 + 0.653955
hsp Mb0257c HEAT SHOCK PROTEIN HSP (HEAT-STRESS-INDUCED RIBOSOME-BINDING PROTEIN A)chromosome CDS300498 480 - 0.666667
hspX Mb2057c HEAT SHOCK PROTEIN HSPX (ALPHA-CRSTALLIN HOMOLOG) (14 kDa ANTIGEN) (HSP16.3)chromosome CDS2262411 435 - 0.616092
htpG Mb2321c PROBABLE CHAPERONE PROTEIN HTPG (HEAT SHOCK PROTEIN) (HSP90 FAMILY PROTEIN) (HIGH TEMPERATURE PROTEIN G)chromosome CDS2547654 1944 - 0.62037
htpX Mb0578 PROBABLE PROTEASE TRANSMEMBRANE PROTEIN HEAT SHOCK PROTEIN HTPXchromosome CDS655122 861 + 0.662021
htrA Mb1255 PROBABLE SERINE PROTEASE HTRA (DEGP PROTEIN)chromosome CDS1367119 1587 + 0.649653
mmpS5 Mb0696c POSSIBLE CONSERVED MEMBRANE PROTEIN MMPS5chromosome CDS780246 429 - 0.615385
mpb53 Mb2903c SOLUBLE SECRETED ANTIGEN MPB53chromosome CDS3145392 522 - 0.628352
msrA Mb0142c PROBABLE PEPTIDE METHIONINE SULFOXIDE REDUCTASE MSRA (PROTEIN-METHIONINE-S-OXIDE REDUCTASE) (PEPTIDE MET(O) REDUCTASE)chromosome CDS164902 549 - 0.639344
nrdH Mb3079c PROBABLE GLUTAREDOXIN ELECTRON TRANSPORT COMPONENT OF NRDEF (GLUTAREDOXIN-LIKE PROTEIN) NRDHchromosome CDS3371279 240 - 0.629167
pcp Mb0327 PROBABLE PYRROLIDONE-CARBOXYLATE PEPTIDASE PCP (5-OXOPROLYL-PEPTIDASE) (PYROGLUTAMYL-PEPTIDASE I) (PGP-I) (PYRASE)chromosome CDS388178 669 + 0.659193
pepA Mb0130 PROBABLE SERINE PROTEASE PEPAchromosome CDS151339 1068 + 0.680712
pflA Mb3162 PROBABLE PYRUVATE FORMATE LYASE ACTIVATING PROTEIN PFLA (FORMATE ACETYLTRANSFERASE ACTIVATING ENZYME) ([PYRUVATE FORMATE-LYASE] ACTIVATING ENZYME)chromosome CDS3459304 1089 + 0.618916
ppiA Mb0009 PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A)chromosome CDS12468 549 + 0.624772
ppiB Mb2613 PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PPIB (CYCLOPHILIN) (PPIASE) (ROTAMASE) (PEPTIDYLPROLYL ISOMERASE)chromosome CDS2874262 927 + 0.639698
prcA Mb2133c proteasome (alpha subunit) PrcAchromosome CDS2349465 747 - 0.634538
prcB Mb2134c proteasome (beta subunit) PrcBchromosome CDS2350208 876 - 0.635845
radA Mb3616 DNA REPAIR PROTEIN RADA (DNA REPAIR PROTEIN SMS)chromosome CDS3969659 1443 + 0.679141
smpB Mb3127c PROBABLE SSRA-BINDING PROTEIN SMPBchromosome CDS3425848 483 - 0.641822
sppA Mb0745 POSSIBLE PROTEASE IV SPPA (ENDOPEPTIDASE IV) (SIGNAL PEPTIDE PEPTIDASE)chromosome CDS817485 1872 + 0.670406
thiX Mb0839c PROBABLE THIOREDOXIN THIXchromosome CDS910441 423 - 0.676123
tig Mb2489c PROBABLE TRIGGER FACTOR (TF) PROTEIN TIGchromosome CDS2732054 1401 - 0.65025
tpx Mb1967 PROBABLE THIOL PEROXIDASE TPXchromosome CDS2175007 498 + 0.654619
trxA Mb1505 PROBABLE THIOREDOXIN TRXAchromosome CDS1655726 375 + 0.573333
trxB1 Mb1506 PROBABLE THIOREDOXIN TRXB1chromosome CDS1656116 372 + 0.634409
trxB2 Mb3944 PROBABLE THIOREDOXIN REDUCTASE TRXB2 (TRXR) (TR)chromosome CDS4335688 1008 + 0.661706
trxC Mb3945 THIOREDOXIN TRXC (TRX) (MPT46)chromosome CDS4336692 351 + 0.589744
ureD Mb1884 Probable urease accessory protein ureDchromosome CDS2091231 627 + 0.682616
ureF Mb1882 Urease accessory protein urefchromosome CDS2089903 636 + 0.710692
ureG Mb1883 Urease accessory protein ureGchromosome CDS2090549 675 + 0.672593