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2024-05-03 14:31:50

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Bradyrhizobium japonicum USDA 110, USDA110

Number of genes found: 260

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Bradyrhizobium japonicum USDA 110, USDA110
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
aat leucyl/phenylalanyl-tRNA-protein transferasechromosome CDS4727435 681 - 0.678414
ahpC alkyl hydroperoxide reductasechromosome CDS1935851 555 - 0.544144
attY glutathione S-transferasechromosome CDS1281438 615 - 0.622764
bcpB BcpB proteinchromosome CDS5623070 582 - 0.656357
bll0109 maleylacetoacetate isomerasechromosome CDS107044 633 - 0.679305
bll0585 glutathione S-transferase family proteinchromosome CDS631804 666 - 0.659159
bll0661 chromosome CDS706422 1539 - 0.705653
bll0715 glutathione S-transferasechromosome CDS763670 693 - 0.656566
bll0735 organic hydroperoxide resistance proteinchromosome CDS784040 426 - 0.704225
bll0773 hypothetical glutathione S-transferase like proteinchromosome CDS828627 597 - 0.663317
bll0799 chromosome CDS857245 696 - 0.683908
bll0800 chromosome CDS858140 570 - 0.638596
bll0849 chromosome CDS912694 1251 - 0.625899
bll1026 chromosome CDS1133020 564 - 0.62766
bll1027 chromosome CDS1133614 699 - 0.685265
bll1317 peroxiredoxinchromosome CDS1429711 486 - 0.63786
bll1351 chromosome CDS1464598 972 - 0.671811
bll1412 chromosome CDS1538879 426 - 0.659624
bll1491 chromosome CDS1625212 843 - 0.669039
bll2045 chromosome CDS2205428 1311 - 0.540809
bll2365 chromosome CDS2569820 750 - 0.629333
bll2483 chromosome CDS2706597 633 - 0.676145
bll2493 chromosome CDS2717596 1215 - 0.653498
bll2497 chromosome CDS2724425 699 - 0.626609
bll2508 hypothetical glutathione S-transferase like proteinchromosome CDS2737087 690 - 0.601449
bll3047 chromosome CDS3365355 648 - 0.682099
bll3993 chromosome CDS4430514 768 - 0.622396
bll4012 organic hydroperoxide resistance proteinchromosome CDS4448405 426 - 0.683099
bll4104 chromosome CDS4534744 942 - 0.639066
bll4149 chromosome CDS4589704 570 - 0.654386
bll4294 outer membrane proteinchromosome CDS4735022 768 - 0.648438
bll4324 chromosome CDS4776891 687 - 0.618632
bll4398 glutathione S-transferase like proteinchromosome CDS4860833 639 - 0.672926
bll4639 chromosome CDS5138037 747 - 0.595716
bll4692 peptidyl prolyl cis-trans isomerasechromosome CDS5195343 576 - 0.631944
bll4817 chromosome CDS5339885 855 - 0.614035
bll4951 chromosome CDS5494753 762 - 0.610236
bll4952 chromosome CDS5495511 1407 - 0.632552
bll5153 ClpA-like proteinchromosome CDS5707779 2409 - 0.647156
bll5157 chromosome CDS5714403 726 - 0.679063
bll5167 glutathione S-transferasechromosome CDS5722924 669 - 0.651719
bll5351 protein-L-isoaspartate O-methyltransferasechromosome CDS5899686 765 - 0.623529
bll5364 chromosome CDS5910321 795 - 0.709434
bll5368 serine proteasechromosome CDS5914429 1272 - 0.663522
bll5607 glutathione S-transferasechromosome CDS6167875 702 - 0.628205
bll5629 chromosome CDS6189764 1329 - 0.683973
bll5660 chromosome CDS6220960 702 - 0.662393
bll5661 chromosome CDS6221664 324 - 0.691358
bll5700 hypothetical glutathione S-transferase like proteinchromosome CDS6266705 642 - 0.635514
bll5738 chromosome CDS6301441 543 - 0.627993
bll5800 chromosome CDS6364304 708 - 0.648305
bll5855 chromosome CDS6431312 537 - 0.659218
bll5883 chromosome CDS6462952 1029 - 0.621963
bll5935 chromosome CDS6528002 930 - 0.610753
bll5957 chromosome CDS6551203 681 - 0.63583
bll6260 peptide methionine sulfoxide reductasechromosome CDS6887320 516 - 0.649225
bll6467 chromosome CDS7119450 525 - 0.607619
bll6506 serine protease DO-like precursorchromosome CDS7164196 1524 - 0.660761
bll6508 chromosome CDS7166144 897 - 0.647715
bll6509 chromosome CDS7167037 1143 - 0.655293
bll6583 chromosome CDS7246344 1374 - 0.671761
bll6650 chromosome CDS7326580 675 - 0.641481
bll6670 chromosome CDS7343675 510 - 0.684314
bll6702 glutathione S-transferasechromosome CDS7372470 738 - 0.638211
bll6732 chromosome CDS7417116 477 - 0.616352
bll6747 chromosome CDS7432183 582 - 0.599656
bll6849 chromosome CDS7544898 513 - 0.672515
bll7013 chromosome CDS7723031 567 - 0.62963
bll7221 chromosome CDS7943024 672 - 0.630952
bll7240 chromosome CDS7962156 1110 - 0.678378
bll7404 hypothetical glutathione S-transferase like proteinchromosome CDS8142381 591 - 0.64467
bll7569 chromosome CDS8302802 918 - 0.659041
bll7626 chromosome CDS8371790 906 - 0.662252
bll7627 chromosome CDS8372743 981 - 0.665647
bll7701 chromosome CDS8446950 357 - 0.627451
bll7749 chromosome CDS8499498 444 - 0.662162
bll7750 chromosome CDS8500003 1005 - 0.649751
bll7849 chromosome CDS8604156 729 - 0.648834
bll7859 chromosome CDS8612033 645 - 0.643411
bll7983 glutathione transferasechromosome CDS8764725 690 - 0.636232
bll7991 chromosome CDS8774857 678 - 0.59882
bll8085 chromosome CDS8864686 2010 - 0.714925
bll8133 glutathione S-transferasechromosome CDS8928861 627 - 0.645933
bll8295 chromosome CDS9081563 1221 - 0.583948
blr0124 chromosome CDS120401 606 + 0.689769
blr0205 chromosome CDS202049 972 + 0.659465
blr0475 chromosome CDS514563 1110 + 0.683784
blr0694 chromosome CDS740099 1206 + 0.686567
blr0741 proteinase IVchromosome CDS790217 981 + 0.650357
blr0920 chromosome CDS1004338 606 + 0.643564
blr0963 chromosome CDS1052699 867 + 0.662053
blr0983 glutathione S-transferase family proteinchromosome CDS1081137 657 + 0.645358
blr1218 chromosome CDS1337745 858 + 0.582751
blr1248 chromosome CDS1363651 1779 + 0.694772
blr1307 chromosome CDS1419731 813 + 0.646986
blr1340 chromosome CDS1456691 543 + 0.677716
blr1349 chromosome CDS1462403 726 + 0.651515
blr1387 chromosome CDS1504019 1140 + 0.652632
blr1415 hypothetical glutathione S-transferase like proteinchromosome CDS1540766 630 + 0.68254
blr1483 sulfate ABC transporter permease proteinchromosome CDS1616911 840 + 0.666667
blr1667 chromosome CDS1826250 1206 + 0.640962
blr1732 chromosome CDS1896844 354 + 0.519774
blr1879 chromosome CDS2032581 615 + 0.603252
blr1990 chromosome CDS2144345 3435 + 0.638137
blr2123 chromosome CDS2298487 588 + 0.612245
blr2239 chromosome CDS2426142 795 + 0.680503
blr2412 chromosome CDS2626423 1431 + 0.642208
blr2774 chromosome CDS3051359 717 + 0.642957
blr2939 glutathione S-transferasechromosome CDS3240243 876 + 0.65411
blr3044 chromosome CDS3360681 1686 + 0.685053
blr3092 chromosome CDS3408025 1371 + 0.692925
blr3130 serine protease DO-like precursorchromosome CDS3455865 1578 + 0.6673
blr3152 Hsp70 family molecular chaperonechromosome CDS3486179 1332 + 0.671922
blr3428 organic hydroperoxide resistance proteinchromosome CDS3796471 429 + 0.652681
blr3487 chromosome CDS3859436 918 + 0.61329
blr3491 chromosome CDS3861907 516 + 0.589147
blr3497 chromosome CDS3867789 648 + 0.569444
blr3683 chaperonin GroELchromosome CDS4072430 1632 + 0.653186
blr3697 chromosome CDS4088424 423 + 0.671395
blr3795 ABC transporter HlyB/MsbA familychromosome CDS4205845 1956 + 0.6682
blr3822 chromosome CDS4239982 1488 + 0.65121
blr4031 hypothetical glutathione S-transferase like proteinchromosome CDS4462566 765 + 0.618301
blr4093 chromosome CDS4526339 519 + 0.67052
blr4331 chromosome CDS4789065 1104 + 0.695652
blr4332 glutathione S-transferasechromosome CDS4790278 678 + 0.647493
blr4339 chromosome CDS4796298 1497 + 0.614562
blr4340 chromosome CDS4797826 780 + 0.624359
blr4341 chromosome CDS4798618 1305 + 0.671264
blr4629 chromosome CDS5127516 423 + 0.619385
blr4635 chaperonin GroELchromosome CDS5134234 1626 + 0.621771
blr4637 chromosome CDS5136425 522 + 0.584291
blr4808 chromosome CDS5327355 1899 + 0.666667
blr5039 chromosome CDS5584665 777 + 0.658945
blr5308 anti-oxidant proteinchromosome CDS5858707 660 + 0.624242
blr5350 glutathione S-transferasechromosome CDS5898904 648 + 0.679012
blr5617 chromosome CDS6177313 759 + 0.638999
blr5632 hypothetical glutathione S-transferase like proteinchromosome CDS6193152 639 + 0.661972
blr5741 chromosome CDS6304666 780 + 0.628205
blr5775 chromosome CDS6341717 444 + 0.662162
blr5799 chromosome CDS6363317 675 + 0.678519
blr5829 chromosome CDS6398016 1149 + 0.696258
blr5839 chromosome CDS6406573 372 + 0.647849
blr6173 chromosome CDS6792211 384 + 0.658854
blr6192 chromosome CDS6813873 615 + 0.669919
blr6565 chromosome CDS7230887 627 + 0.650718
blr6664 glutathione S-transferasechromosome CDS7339030 666 + 0.68018
blr6665 chromosome CDS7339747 780 + 0.637179
blr7044 peptide methionine sulfoxide reductasechromosome CDS7760321 420 + 0.654762
blr7175 hypothetical glutathione S-transferase like proteinchromosome CDS7896692 645 + 0.644961
blr7274 serine proteasechromosome CDS8004329 867 + 0.713956
blr7418 hypothetical glutathione S-transferase like proteinchromosome CDS8157561 651 + 0.652842
blr7530 chromosome CDS8263550 804 + 0.645522
blr7723 chromosome CDS8469441 1434 + 0.62622
blr7740 small heat shock proteinchromosome CDS8486004 486 + 0.621399
blr7853 chromosome CDS8606280 441 + 0.655329
blr7892 chromosome CDS8654054 612 + 0.629085
blr7961 chromosome CDS8739268 528 + 0.585227
bsr0210 glutaredoxinchromosome CDS206833 276 + 0.648551
bsr2313 chromosome CDS2510008 276 + 0.594203
cbbX chromosome CDS2830272 939 + 0.646432
ccdA cytochrome c-type biogenesis proteinchromosome CDS3877712 732 + 0.657104
ccdA cytochrome c-type biogenesis proteinchromosome CDS3066518 732 + 0.662568
ccmA heme exporter protein Achromosome CDS508457 603 + 0.691542
ccmB heme exporter protein Bchromosome CDS509370 669 + 0.702541
ccmC heme exporter protein Cchromosome CDS510130 792 + 0.662879
ccmG thiol:disulfide interchange proteinchromosome CDS511100 585 + 0.673504
clpB ATP-dependent protease ATP-binding subunitchromosome CDS1520303 2640 + 0.655303
clpB ATP-dependent Clp protease ATP-binding subunitchromosome CDS3962178 2640 - 0.614015
clpP ATP-dependent protease proteolytic subunitchromosome CDS654336 603 + 0.61194
clpP ATP-dependent Clp protease proteolytic subunitchromosome CDS5485552 636 - 0.628931
clpX ATP-dependent Clp protease ATP-binding subunitchromosome CDS5483832 1272 - 0.628145
cox15 cytochrome oxidase assembly factorchromosome CDS5509496 1083 - 0.67036
coxE chromosome CDS1291443 945 + 0.66455
coxG chromosome CDS1292563 645 + 0.652713
ctpB pilus assembly protein prepilin peptidase subunitchromosome CDS1573680 525 - 0.664762
cycH cytochrome C-type biogenesis proteinchromosome CDS3450052 1110 + 0.673874
cycJ cytochrome C-type biogenesis proteinchromosome CDS3451196 510 + 0.664706
cycK cytochrome C-type biogenesis proteinchromosome CDS3451702 1983 + 0.665154
cycL cytochrome C-type biogenesis proteinchromosome CDS3453689 483 + 0.691511
degP serine proteasechromosome CDS5785352 1116 + 0.590502
dnaJ chaperone proteinchromosome CDS727214 1134 + 0.656967
dnaJ chaperone proteinchromosome CDS2874743 963 + 0.678089
dnaJ molecular chaperone DnaJ familychromosome CDS179535 633 - 0.638231
dnaJ molecular chaperone DnaJ familychromosome CDS5151549 918 + 0.603486
dnaK heat shock protein 70chromosome CDS725067 1902 + 0.64511
dop serine protease DO-like proteasechromosome CDS2835678 1587 + 0.676118
fbp Peptidylprolyl isomerasechromosome CDS2621820 465 + 0.643011
fixN cytochrome-c oxidasechromosome CDS3041005 1650 + 0.635758
fixQ cbb3 oxidase subunit IVchromosome CDS3043457 123 + 0.601626
flgA chromosome CDS7567430 528 - 0.679924
ftsH metalloproteasechromosome CDS7866339 1923 - 0.657826
gcp O-sialoglycoprotein endopeptidasechromosome CDS608083 1074 + 0.700186
glnD bifunctional uridylyltransferase/uridylyl-removing enzymechromosome CDS998403 2994 - 0.658317
glnE glutamate-ammonia-ligase adenylyltransferasechromosome CDS3459835 2988 + 0.669679
grlA glutaredoxin-related proteinchromosome CDS6276694 333 - 0.57958
groEL 60 KDA chaperoninchromosome CDS6186682 1641 + 0.650823
groEL 60 KDA chaperoninchromosome CDS8265839 1632 + 0.667892
groEL1 heat shock proteinchromosome CDS5779392 1623 + 0.638324
groEL2 chaperoninchromosome CDS7680607 1653 + 0.61706
groEL3 GroEL3 chaperoninchromosome CDS2220960 1641 - 0.636807
groES 10 KD chaperonin (protein CPN10)chromosome CDS8265377 297 + 0.606061
groES 10 KD chaperoninchromosome CDS6186325 315 + 0.615873
groES1 heat shock proteinchromosome CDS5779023 321 + 0.598131
groES2 chaperoninchromosome CDS7680221 315 + 0.6
groES3 GroES3 chaperoninchromosome CDS2222683 315 - 0.561905
grpE heat shock proteinchromosome CDS722003 606 + 0.673267
gst glutathione S-transferasechromosome CDS2729731 621 + 0.626409
hslO heat shock protein 33chromosome CDS1213472 1008 + 0.680556
hslU heat shock chaperonechromosome CDS693203 1305 - 0.654406
hslV ATP-dependent proteasechromosome CDS695841 561 - 0.664884
hspA small heat shock proteinchromosome CDS5782157 459 + 0.616558
hspB small heat shock proteinchromosome CDS5784233 462 + 0.599567
hspC small heat shock proteinchromosome CDS5784779 501 + 0.576846
hspD small heat shock proteinchromosome CDS5775360 471 - 0.600849
hspE small heat shock proteinchromosome CDS5776297 453 + 0.613687
hspF small heat shock proteinchromosome CDS5776843 492 + 0.593496
hspH small heat shock proteinchromosome CDS7237747 456 + 0.60307
hspH small heat shock proteinchromosome CDS777361 426 - 0.612676
htpG chromosome CDS8534059 1878 - 0.649095
htpx protease heat shock proteinchromosome CDS2670642 972 + 0.66358
htrA chromosome CDS2987198 1020 + 0.688235
hupF chromosome CDS1893144 291 + 0.594502
hupF hydrogenase expression/formation proteinchromosome CDS7633819 297 - 0.649832
hupG HupG proteinchromosome CDS7633100 447 - 0.662192
hypB HypB proteinchromosome CDS7629201 909 - 0.632563
hypB chromosome CDS1896386 513 + 0.588694
hypC hydrogenase expression/formation proteinchromosome CDS7626707 237 - 0.611814
hypD hydrogenase expression/formation proteinchromosome CDS1900381 1152 + 0.600694
hypD' HypD' proteinchromosome CDS7625568 1143 - 0.641295
hypE HypE proteinchromosome CDS7624531 1041 - 0.67243
hypE hydrogenase expression/formation proteinchromosome CDS1901529 1047 + 0.595033
hypF hydrogenase maturation proteinchromosome CDS1898648 1746 + 0.619702
hypF hydrogenase maturation proteinchromosome CDS7626943 2262 - 0.683466
ligE chromosome CDS8165143 759 - 0.653491
lon ATP-dependent protease LAchromosome CDS6792603 2391 + 0.683814
lon ATP-dependent protease LAchromosome CDS5481084 2424 - 0.630776
msrA peptide methionine sulfoxide reductasechromosome CDS897496 657 + 0.648402
msrA peptide methionine sulfoxide reductasechromosome CDS7759587 705 + 0.643972
nodU 6-O-carbamoyl transferasechromosome CDS2187460 1710 + 0.592982
nolN NolN proteinchromosome CDS2191127 396 + 0.565657
nolO NolO proteinchromosome CDS2191519 1647 + 0.579842
ohr chromosome CDS1312870 420 + 0.67381
osmC chromosome CDS6888327 423 - 0.635934
papA chromosome CDS2486948 1656 - 0.577899
pcm protein-L-isoaspartate O-methyltransferasechromosome CDS4950693 723 + 0.666667
pcm chromosome CDS5255506 651 - 0.662058
ppiB peptidyl prolyl cis-trans isomerasechromosome CDS5194459 465 - 0.649462
radA DNA repair proteinchromosome CDS4494551 1446 - 0.681189
smpB tmRNA-binding proteinchromosome CDS5623656 474 - 0.620253
sohB proteinasechromosome CDS2768524 909 + 0.672167
soxW chromosome CDS3879219 615 + 0.61626
tig trigger factorchromosome CDS5486478 1362 - 0.646843
tlpA thioredoxin-like proteinchromosome CDS1496312 666 - 0.672673
traF conjugal transfer protein precursorchromosome CDS42820 546 - 0.664835
trxA thioredoxinchromosome CDS640456 942 + 0.666667
trxA thioredoxin C-1chromosome CDS798800 321 - 0.632399
trxB thioredoxin reductasechromosome CDS8119269 966 + 0.65528
ureD urease accessory proteinchromosome CDS1585144 831 + 0.670277
ureF urease accessory proteinchromosome CDS1590100 729 + 0.689986
ureG urease accessory proteinchromosome CDS1590988 624 + 0.658654