Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Xylella fastidiosa 9a5c
Number of genes found: 105
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| Xylella fastidiosa 9a5c | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | XF2348 | conserved hypothetical protein | RecName: Full=SsrA-binding protein; | chromosome | CDS | 2226256 | 504 | + | 0.529762 |
| NA | XF2174 | thioredoxin | SubName: Full=Thioredoxin; | chromosome | CDS | 2059817 | 1017 | - | 0.512291 |
| NA | XF0615 | 60kDa chaperonin | RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; | chromosome | CDS | 594635 | 1644 | - | 0.515207 |
| NA | XF2595 | glutaredoxin | SubName: Full=Glutaredoxin; | chromosome | CDS | 2475449 | 357 | + | 0.501401 |
| NA | XF1191 | peptidyl-prolyl cis-trans isomerase | SubName: Full=Peptidyl-prolyl cis-trans isomerase; | chromosome | CDS | 1143435 | 1968 | + | 0.499492 |
| NA | XF1345 | ABC transporter sulfate permease | SubName: Full=ABC transporter sulfate permease; | chromosome | CDS | 1292372 | 861 | + | 0.536585 |
| NA | XF2669 | conserved hypothetical protein | RecName: Full=Glutaredoxin; | chromosome | CDS | 2545849 | 315 | - | 0.507937 |
| NA | XF1476 | ABC transporter membrane protein | SubName: Full=ABC transporter membrane protein; | chromosome | CDS | 1421228 | 1458 | - | 0.546639 |
| NA | XF0207 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 215580 | 378 | + | 0.52381 |
| NA | XF0576 | metallopeptidase | SubName: Full=Metallopeptidase; | chromosome | CDS | 558463 | 2103 | - | 0.542083 |
| NA | XF1561 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1518193 | 756 | + | 0.634921 |
| NA | XF1713 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1632834 | 336 | - | 0.464286 |
| NA | XF2603 | conserved hypothetical protein | RecName: Full=Fe/S biogenesis protein NfuA; | chromosome | CDS | 2483467 | 531 | - | 0.531073 |
| NA | XF0838 | peptidyl-prolyl cis-trans isomerase | RecName: Full=Chaperone SurA; AltName: Full=Peptidyl-prolyl cis-trans isomerase SurA; Short=PPIase SurA; EC=5.2.1.8; AltName: Full=Rotamase SurA; Flags: Precursor; | chromosome | CDS | 792417 | 1395 | + | 0.541936 |
| NA | XF2039 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1941921 | 858 | - | 0.572261 |
| NA | XF1436 | disulfide oxidoreductase | RecName: Full=Thiol:disulfide interchange protein; | chromosome | CDS | 1381116 | 582 | + | 0.54811 |
| NA | XF1485 | heat shock protein | RecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; | chromosome | CDS | 1430680 | 1380 | + | 0.513768 |
| NA | XF1437 | thiol:disulfide interchange protein | SubName: Full=Thiol:disulfide interchange protein; | chromosome | CDS | 1381805 | 783 | + | 0.532567 |
| NA | XF2241 | periplasmic protease | SubName: Full=Periplasmic protease; | chromosome | CDS | 2131589 | 1545 | + | 0.543042 |
| NA | XF0381 | ATP-dependent Clp protease subunit | RecName: Full=Chaperone protein ClpB; | chromosome | CDS | 391356 | 2586 | + | 0.516628 |
| NA | XF1940 | peptide methionine sulfoxide reductase | RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase; | chromosome | CDS | 1842787 | 651 | - | 0.49616 |
| NA | XF1489 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1437445 | 642 | + | 0.456386 |
| NA | XF1890 | glutathione peroxidase-like protein | RecName: Full=Glutathione peroxidase; | chromosome | CDS | 1797633 | 573 | - | 0.499127 |
| NA | XF2460 | c-type cytochrome biogenesis membrane protein | SubName: Full=C-type cytochrome biogenesis membrane protein; | chromosome | CDS | 2344949 | 1941 | + | 0.612056 |
| NA | XF2457 | heme ABC transporter membrane protein | SubName: Full=Heme ABC transporter membrane protein; | chromosome | CDS | 2343467 | 744 | + | 0.603495 |
| NA | XF0511 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 507660 | 2259 | + | 0.640992 |
| NA | XF1186 | peptidyl-prolyl cis-trans isomerase | RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; | chromosome | CDS | 1136247 | 1296 | + | 0.49537 |
| NA | XF1199 | thioredoxin | SubName: Full=Thioredoxin; | chromosome | CDS | 1152952 | 327 | + | 0.513761 |
| NA | XF0452 | integral membrane protease | SubName: Full=Integral membrane protease; | chromosome | CDS | 459602 | 1140 | + | 0.549123 |
| NA | XF2234 | low molecular weight heat shock protein | SubName: Full=Low molecular weight heat shock protein; | chromosome | CDS | 2122386 | 483 | - | 0.503106 |
| NA | XF2463 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2347903 | 645 | + | 0.589147 |
| NA | XF1530 | subunit C of alkyl hydroperoxide reductase | SubName: Full=Subunit C of alkyl hydroperoxide reductase; | chromosome | CDS | 1487748 | 621 | + | 0.462158 |
| NA | XF1210 | glutathione S-transferase | SubName: Full=Glutathione S-transferase; | chromosome | CDS | 1159459 | 618 | + | 0.508091 |
| NA | XF1018 | arginine-tRNA-protein transferase | RecName: Full=Putative arginyl-tRNA--protein transferase; Short=Arginyltransferase; Short=R-transferase; EC=2.3.2.8; | chromosome | CDS | 976043 | 765 | - | 0.571242 |
| NA | XF1179 | competence related protein | SubName: Full=Competence related protein; | chromosome | CDS | 1124637 | 1521 | + | 0.51545 |
| NA | XF0636 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 612114 | 468 | + | 0.623932 |
| NA | XF1908 | conserved hypothetical protein | RecName: Full=Probable Fe(2+)-trafficking protein; | chromosome | CDS | 1814150 | 318 | - | 0.471698 |
| NA | XF1189 | ATP-dependent serine proteinase La | RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; | chromosome | CDS | 1139789 | 2547 | + | 0.485669 |
| NA | XF2455 | heme ABC transporter ATP-binding protein | RecName: Full=Cytochrome c biogenesis ATP-binding export protein CcmA; EC=3.6.3.41; AltName: Full=Heme exporter protein A; | chromosome | CDS | 2342070 | 672 | + | 0.610119 |
| NA | XF1378 | DNA repair protein | RecName: Full=DNA repair protein radA; | chromosome | CDS | 1324927 | 1392 | - | 0.568965 |
| NA | XF2625 | heat shock protein | RecName: Full=Protease HtpX; EC=3.4.24.-; AltName: Full=Heat shock protein HtpX; | chromosome | CDS | 2504341 | 870 | - | 0.485057 |
| NA | XF0006 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 8042 | 921 | + | 0.4962 |
| NA | XF0620 | c-type cytochrome biogenesis protein (copper tolerance) | SubName: Full=C-type cytochrome biogenesis protein (Copper tolerance); | chromosome | CDS | 597627 | 2277 | + | 0.523057 |
| NA | XF1474 | ABC transporter membrane protein | SubName: Full=ABC transporter membrane protein; | chromosome | CDS | 1418987 | 1269 | - | 0.586288 |
| NA | XF1448 | thioredoxin reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome | CDS | 1391562 | 966 | - | 0.534162 |
| NA | XF1212 | peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 1161368 | 495 | - | 0.50303 |
| NA | XF2340 | DnaK protein | RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; | chromosome | CDS | 2218887 | 1917 | - | 0.507042 |
| NA | XF0435 | O-sialoglycoprotein endopeptidase | RecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; | chromosome | CDS | 444975 | 1047 | + | 0.560649 |
| NA | XF1887 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1792367 | 2151 | - | 0.479312 |
| NA | XF0156 | cysteine protease | SubName: Full=Cysteine protease; | chromosome | CDS | 159327 | 816 | - | 0.422794 |
| NA | XF2341 | heat shock protein GrpE | RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; | chromosome | CDS | 2220937 | 603 | - | 0.529022 |
| NA | XF0961 | bacterioferritin comigratory protein | SubName: Full=Bacterioferritin comigratory protein; | chromosome | CDS | 920666 | 480 | - | 0.49375 |
| NA | XF1531 | subunit F of alkyl hydroperoxide reductase | SubName: Full=Subunit F of alkyl hydroperoxide reductase; | chromosome | CDS | 1488446 | 1716 | + | 0.520979 |
| NA | XF1604 | ABC transporter vitamin B12 uptake permease | RecName: Full=Glutathione peroxidase; | chromosome | CDS | 1544674 | 585 | + | 0.511111 |
| NA | XF2698 | thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 2576711 | 342 | + | 0.459064 |
| NA | XF1187 | ATP-dependent Clp protease proteolytic subunit | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 1137677 | 627 | + | 0.475279 |
| NA | XF2585 | protein-L-isoaspartate O-methyltransferase | SubName: Full=Protein-L-isoaspartate O-methyltransferase; | chromosome | CDS | 2463660 | 657 | + | 0.544901 |
| NA | XF1894 | conserved hypothetical protein | RecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; | chromosome | CDS | 1801892 | 684 | - | 0.488304 |
| NA | XF1533 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1491327 | 690 | + | 0.552174 |
| NA | XF0911 | stringent starvation protein A | SubName: Full=Stringent starvation protein A; | chromosome | CDS | 878873 | 636 | + | 0.482704 |
| NA | XF2100 | aspartyl/asparaginyl beta-hydroxylase | SubName: Full=Aspartyl/asparaginyl beta-hydroxylase; | chromosome | CDS | 1998801 | 906 | + | 0.527594 |
| NA | XF1360 | cytochrome C oxidase assembly factor | RecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; | chromosome | CDS | 1306885 | 912 | + | 0.51864 |
| NA | XF1446 | protein transferase | RecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; | chromosome | CDS | 1389255 | 732 | - | 0.554645 |
| NA | XF2459 | c-type cytochrome biogenesis protein | RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE; | chromosome | CDS | 2344368 | 462 | + | 0.562771 |
| NA | XF2731 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2621690 | 207 | + | 0.478261 |
| NA | XF2245 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2136023 | 414 | + | 0.391304 |
| NA | XF0113 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 110043 | 168 | + | 0.488095 |
| NA | XF1443 | ATP-dependent Clp protease subunit | SubName: Full=ATP-dependent Clp protease subunit; | chromosome | CDS | 1386311 | 2277 | + | 0.509003 |
| NA | XF1827 | organic hydroperoxide resistance protein | SubName: Full=Organic hydroperoxide resistance protein; | chromosome | CDS | 1742868 | 432 | - | 0.49537 |
| NA | XF0340 | disulfide bond formation protein B | RecName: Full=Disulfide bond formation protein B; AltName: Full=Disulfide oxidoreductase; | chromosome | CDS | 350618 | 522 | - | 0.488506 |
| NA | XF2462 | c-type cytochrome biogenesis protein | SubName: Full=C-type cytochrome biogenesis protein; | chromosome | CDS | 2347472 | 435 | + | 0.581609 |
| NA | XF2537 | pre-pilin leader peptidase | RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; | chromosome | CDS | 2410453 | 864 | - | 0.509259 |
| NA | XF1475 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 1420255 | 837 | - | 0.550777 |
| NA | XF2456 | heme ABC transporter membrane protein | RecName: Full=Heme exporter protein B; | chromosome | CDS | 2342738 | 696 | + | 0.619253 |
| NA | XF0849 | conserved hypothetical protein | RecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; | chromosome | CDS | 810753 | 468 | - | 0.574786 |
| NA | XF0184 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 193945 | 435 | - | 0.514943 |
| NA | XF0160 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 161774 | 555 | + | 0.43964 |
| NA | XF2058 | conjugal transfer protein | SubName: Full=Conjugal transfer protein; | chromosome | CDS | 1958143 | 537 | + | 0.502793 |
| NA | XF1484 | heat shock protein | RecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; | chromosome | CDS | 1430075 | 537 | + | 0.541899 |
| NA | XF1834 | disulphide isomerase | SubName: Full=Disulphide isomerase; | chromosome | CDS | 1750667 | 465 | - | 0.494624 |
| NA | XF1714 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1633153 | 543 | - | 0.504604 |
| NA | XF0616 | 10kDa chaperonin | RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; | chromosome | CDS | 596389 | 288 | - | 0.524306 |
| NA | XF0857 | L-isoaspartate O-methyltransferase | RecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; Short=PIMT; | chromosome | CDS | 818487 | 678 | - | 0.561947 |
| NA | XF0623 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 601839 | 333 | + | 0.477477 |
| NA | XF2233 | DnaJ protein | SubName: Full=DnaJ protein; | chromosome | CDS | 2121360 | 882 | - | 0.558957 |
| NA | XF0644 | peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 616918 | 693 | - | 0.519481 |
| NA | XF2461 | c-type cytochrome biogenesis protein/thioredoxin | RecName: Full=Thiol:disulfide interchange protein DsbE; AltName: Full=Cytochrome c biogenesis protein CcmG; | chromosome | CDS | 2346882 | 594 | + | 0.575758 |
| NA | XF0093 | cell division protein | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome | CDS | 92252 | 1938 | - | 0.508772 |
| NA | XF2594 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2473753 | 1665 | - | 0.544144 |
| NA | XF1182 | lipase modulator | RecName: Full=Lipase chaperone; AltName: Full=Lipase activator protein; AltName: Full=Lipase foldase; AltName: Full=Lipase helper protein; AltName: Full=Lipase modulator; | chromosome | CDS | 1129813 | 1053 | + | 0.493827 |
| NA | XF0185 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 194380 | 1014 | - | 0.510848 |
| NA | XF0978 | heat shock protein G | RecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; | chromosome | CDS | 937243 | 1914 | - | 0.529258 |
| NA | XF0166 | conserved hypothetical protein | RecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; | chromosome | CDS | 167622 | 1146 | - | 0.569808 |
| NA | XF1359 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1305725 | 1164 | + | 0.554124 |
| NA | XF0285 | heat shock protein | SubName: Full=Heat shock protein; | chromosome | CDS | 295471 | 1446 | - | 0.5574 |
| NA | XF1605 | peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 1545976 | 888 | + | 0.524775 |
| NA | XF1026 | serine protease | SubName: Full=Serine protease; | chromosome | CDS | 981158 | 2718 | + | 0.562914 |
| NA | XF0267 | serine protease | SubName: Full=Serine protease; | chromosome | CDS | 277975 | 2733 | + | 0.559824 |
| NA | XF0453 | integral membrane proteinase | RecName: Full=Protein HflC; | chromosome | CDS | 460738 | 864 | + | 0.49537 |
| NA | XF2339 | DnaJ protein | RecName: Full=Chaperone protein DnaJ; | chromosome | CDS | 2217643 | 1107 | - | 0.532069 |
| NA | XF1990 | thioredoxin | SubName: Full=Thioredoxin; | chromosome | CDS | 1903620 | 636 | - | 0.534591 |
| NA | XF2685 | protease IV | RecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; | chromosome | CDS | 2561252 | 1902 | - | 0.507361 |
| NA | XF1424 | chitinase | SubName: Full=Chitinase; | chromosome | CDS | 1371728 | 789 | - | 0.538657 |
| NA | XF1188 | ATP-dependent Clp protease ATP binding subunit Clpx | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; | chromosome | CDS | 1138431 | 1281 | + | 0.468384 |
| NA | XF0652 | peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 622038 | 480 | - | 0.5375 |
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