Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Bacteroides fragilis YCH46, YCH46
Number of genes found: 105
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| Bacteroides fragilis YCH46, YCH46 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | BF4487 | magnesium chelatase subunit ChlI | chromosome | CDS | 5148596 | 1539 | + | 0.460039 |
| NA | BF3693 | anaerobic ribonucleoside-triphosphate reductase activating protein | chromosome | CDS | 4201987 | 459 | + | 0.490196 |
| NA | BF1400 | peptidase | chromosome | CDS | 1636080 | 801 | - | 0.470662 |
| NA | BF0463 | conserved hypothetical protein | chromosome | CDS | 543222 | 888 | + | 0.408784 |
| NA | BF0599 | putative collagenase | chromosome | CDS | 704900 | 1827 | + | 0.515599 |
| NA | BF4074 | peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4654276 | 1554 | - | 0.458172 |
| NA | BF2181 | thioredoxin | chromosome | CDS | 2545818 | 357 | - | 0.380952 |
| NA | BF1292 | putative thioredoxin | chromosome | CDS | 1528498 | 324 | + | 0.410494 |
| NA | BF1889 | putative protease | chromosome | CDS | 2221768 | 969 | - | 0.428277 |
| NA | BF3993 | putative thiol:disulfide interchange protein DsbE | chromosome | CDS | 4564018 | 1902 | + | 0.467403 |
| NA | BF2634 | putative thioredoxin | chromosome | CDS | 3029317 | 297 | - | 0.461279 |
| NA | BF4486 | conserved hypothetical protein | chromosome | CDS | 5147492 | 1071 | + | 0.398693 |
| NA | BF2763 | putative thiol peroxidase | chromosome | CDS | 3175264 | 501 | - | 0.48503 |
| NA | BF1743 | GrpE protein | chromosome | CDS | 2050558 | 588 | - | 0.435374 |
| NA | BF3451 | protease IV | chromosome | CDS | 3951528 | 1779 | + | 0.431141 |
| NA | BF4408 | conserved hypothetical protein | chromosome | CDS | 5037773 | 1305 | - | 0.348659 |
| NA | BF3595 | conserved hypothetical protein | chromosome | CDS | 4105939 | 546 | - | 0.428571 |
| NA | BF3175 | thioredoxin | chromosome | CDS | 3599663 | 297 | + | 0.414141 |
| NA | BF0693 | chaperone protein DnaK | chromosome | CDS | 820058 | 1590 | - | 0.412579 |
| NA | BF2884 | hypothetical protein | chromosome | CDS | 3299029 | 1791 | + | 0.486879 |
| NA | BF1338 | pyruvate formate-lyase activating enzyme | chromosome | CDS | 1581621 | 726 | - | 0.444904 |
| NA | BF3377 | putative chaperone DnaJ | chromosome | CDS | 3863825 | 942 | - | 0.475584 |
| NA | BF2431 | putative O-sialoglycoprotein endopeptidase | chromosome | CDS | 2808908 | 1020 | - | 0.416667 |
| NA | BF0265 | ABC transporter permease | chromosome | CDS | 290526 | 1458 | + | 0.431413 |
| NA | BF3106 | conserved hypothetical protein | chromosome | CDS | 3515406 | 240 | + | 0.3 |
| NA | BF3176 | thioredoxin | chromosome | CDS | 3599969 | 468 | + | 0.399573 |
| NA | BF3704 | putative glycoprotease | chromosome | CDS | 4213368 | 690 | - | 0.462319 |
| NA | BF1335 | conserved hypothetical protein | chromosome | CDS | 1578586 | 753 | - | 0.413015 |
| NA | BF1214 | putative bacterioferritin co-migratory protein | chromosome | CDS | 1446196 | 447 | - | 0.409396 |
| NA | BF3303 | hypothetical protein | chromosome | CDS | 3754210 | 1527 | + | 0.494434 |
| NA | BF4247 | putative outer membrane protein probably involved in nutrient binding | chromosome | CDS | 4843371 | 3246 | + | 0.441466 |
| NA | BF4113 | cyclophilin-type peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4712076 | 840 | - | 0.4 |
| NA | BF2835 | ATP-dependent Clp protease ATP-binding subunit | chromosome | CDS | 3242620 | 2439 | + | 0.438294 |
| NA | BF3770 | peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4285428 | 591 | + | 0.433164 |
| NA | BF4382 | formate acetyltransferase activating enzyme | chromosome | CDS | 5006706 | 753 | + | 0.415671 |
| NA | BF1217 | conserved hypothetical protein | chromosome | CDS | 1449388 | 792 | + | 0.406566 |
| NA | BF1805 | conserved hypothetical protein | chromosome | CDS | 2124224 | 984 | + | 0.504065 |
| NA | BF4325 | conserved hypothetical protein | chromosome | CDS | 4921993 | 1152 | - | 0.393229 |
| NA | BF2744 | serine protease precursor | chromosome | CDS | 3155764 | 1548 | - | 0.511628 |
| NA | BF1225 | chaperone protein DnaK | chromosome | CDS | 1456164 | 1920 | + | 0.44375 |
| NA | BF1861 | hypothetical protein | chromosome | CDS | 2190069 | 795 | + | 0.340881 |
| NA | BF4102 | putative endothelin-converting enzyme | chromosome | CDS | 4691633 | 2034 | - | 0.457227 |
| NA | BF3348 | conserved hypothetical protein | chromosome | CDS | 3823667 | 1056 | - | 0.419508 |
| NA | BF2376 | hypothetical protein | chromosome | CDS | 2749070 | 270 | + | 0.322222 |
| NA | BF3193 | thiol:disulfide interchange protein DsbD precursor | chromosome | CDS | 3619970 | 2010 | - | 0.421393 |
| NA | BF4515 | peptidylprolyl isomerase | chromosome | CDS | 5182458 | 864 | + | 0.420139 |
| NA | BF4073 | conserved hypothetical protein | chromosome | CDS | 4653377 | 843 | - | 0.442467 |
| NA | BF3525 | thiol:disulfide interchange protein | chromosome | CDS | 4031016 | 1212 | - | 0.427393 |
| NA | BF3886 | glutathione peroxidase | chromosome | CDS | 4424493 | 543 | - | 0.423573 |
| NA | BF0985 | hypothetical protein | chromosome | CDS | 1189365 | 426 | - | 0.396714 |
| NA | BF2266 | thioredoxin peroxidase | chromosome | CDS | 2640052 | 633 | + | 0.464455 |
| NA | BF0237 | heat shock protein HtpG | chromosome | CDS | 259490 | 1767 | + | 0.431805 |
| NA | BF1961 | conserved hypothetical protein | chromosome | CDS | 2302645 | 3072 | - | 0.403971 |
| NA | BF1035 | thioredoxin reductase | chromosome | CDS | 1243284 | 948 | + | 0.464135 |
| NA | BF2301 | conserved hypothetical protein | chromosome | CDS | 2675326 | 510 | + | 0.405882 |
| NA | BF2167 | conserved hypothetical protein | chromosome | CDS | 2531451 | 1518 | + | 0.428854 |
| NA | BF0268 | putative ABC transporter permease protein | chromosome | CDS | 293514 | 1344 | + | 0.436756 |
| NA | BF3831 | hypothetical protein | chromosome | CDS | 4372591 | 1422 | + | 0.467651 |
| NA | BF4079 | FKBP-type peptidyl-prolyl cis-transisomerase | chromosome | CDS | 4661937 | 1356 | - | 0.435841 |
| NA | BF3200 | SsrA-binding protein | chromosome | CDS | 3629762 | 453 | - | 0.415011 |
| NA | BF3253 | conserved hypothetical protein | chromosome | CDS | 3696007 | 2343 | + | 0.506615 |
| NA | BF2410 | ATP-dependent Clp protease | chromosome | CDS | 2785174 | 2535 | - | 0.452465 |
| NA | BF3218 | thiol:disulfide interchange protein | chromosome | CDS | 3650184 | 1086 | + | 0.476059 |
| NA | BF0515 | conserved hypothetical protein | chromosome | CDS | 591036 | 1017 | - | 0.354966 |
| NA | BF4077 | ATP-dependent Clp protease ATP-binding subunit | chromosome | CDS | 4659887 | 1248 | - | 0.483173 |
| NA | BF1259 | alkyl hydroperoxide reductase subunit C | chromosome | CDS | 1497394 | 567 | - | 0.481481 |
| NA | BF0422 | cytochrome c biogenesis protein CcsA | chromosome | CDS | 492839 | 792 | + | 0.464646 |
| NA | BF3220 | probable thiol:disulfide interchange protein | chromosome | CDS | 3652238 | 1632 | + | 0.482843 |
| NA | BF4072 | peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4651997 | 1371 | - | 0.458789 |
| NA | BF4514 | FKBP-type peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 5181853 | 585 | + | 0.452991 |
| NA | BF2269 | cytochrome c biogenesis protein | chromosome | CDS | 2642619 | 786 | - | 0.441476 |
| NA | BF0774 | AAA-metalloprotease FtsH with ATPase domain | chromosome | CDS | 921274 | 1995 | - | 0.466165 |
| NA | BF0413 | putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA | chromosome | CDS | 484950 | 552 | + | 0.398551 |
| NA | BF4078 | ATP-dependent Clp protease proteolytic subunit 2 | chromosome | CDS | 4661137 | 663 | - | 0.46003 |
| NA | BF3395 | 60 kDa chaperonin GroEL | chromosome | CDS | 3881130 | 1638 | - | 0.438339 |
| NA | BF2724 | thiol:disulfide interchange protein | chromosome | CDS | 3126282 | 1104 | + | 0.459239 |
| NA | BF1077 | peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 1299271 | 2139 | + | 0.431978 |
| NA | BF0184 | conserved hypothetical protein | chromosome | CDS | 197261 | 528 | + | 0.44697 |
| NA | BF2333 | probable protease | chromosome | CDS | 2695737 | 1038 | + | 0.516378 |
| NA | BF2625 | small heat shock protein | chromosome | CDS | 3016555 | 429 | + | 0.389277 |
| NA | BF2782 | hypothetical protein | chromosome | CDS | 3195449 | 963 | + | 0.358255 |
| NA | BF3383 | putative thiol:disulfide interchange protein | chromosome | CDS | 3870540 | 2214 | + | 0.469286 |
| NA | BF1954 | endopeptidase Clp ATP-binding chain B | chromosome | CDS | 2294801 | 2484 | - | 0.483897 |
| NA | BF1205 | endopeptidase Clp ATP-binding chain B | chromosome | CDS | 1437523 | 2589 | - | 0.428737 |
| NA | BF1258 | alkyl hydroperoxide reductase subunit F | chromosome | CDS | 1495743 | 1551 | - | 0.512573 |
| NA | BF1446 | putative protein disulfide isomerase | chromosome | CDS | 1691165 | 597 | + | 0.460637 |
| NA | BF0713 | thioredoxin | chromosome | CDS | 838887 | 315 | + | 0.390476 |
| NA | BF4000 | subtilisin-like serine proteases | chromosome | CDS | 4571320 | 1356 | - | 0.520649 |
| NA | BF2304 | ATP-dependent protease | chromosome | CDS | 2678230 | 2469 | - | 0.442284 |
| NA | BF4564 | collagenase precursor | chromosome | CDS | 5248070 | 1269 | - | 0.477541 |
| NA | BF0703 | hypothetical protein | chromosome | CDS | 830585 | 165 | - | 0.369697 |
| NA | BF0605 | putative DNA repair protein | chromosome | CDS | 713014 | 1368 | - | 0.522661 |
| NA | BF0267 | ABC transporter ATP-binding protein | chromosome | CDS | 292753 | 753 | + | 0.444887 |
| NA | BF2270 | conserved hypothetical protein | chromosome | CDS | 2643388 | 888 | - | 0.396396 |
| NA | BF3396 | 10 kDa chaperonin GroES | chromosome | CDS | 3882810 | 273 | - | 0.410256 |
| NA | BF3510 | conserved hypothetical protein | chromosome | CDS | 4010507 | 939 | - | 0.386581 |
| NA | BF4233 | conserved hypothetical protein | chromosome | CDS | 4826153 | 723 | + | 0.485477 |
| NA | BF0047 | hypothetical protein | chromosome | CDS | 51985 | 870 | + | 0.33908 |
| NA | BF3573 | peptide methionine sulfoxide reductase | chromosome | CDS | 4085419 | 1086 | + | 0.407919 |
| NA | BF2021 | peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 2372532 | 402 | + | 0.470149 |
| NA | BF2672 | thioredoxin | chromosome | CDS | 3070783 | 486 | + | 0.442387 |
| NA | BF1742 | chaperone protein DnaJ | chromosome | CDS | 2049322 | 1185 | - | 0.466667 |
| NA | BF2409 | chaperone protein HtpG | chromosome | CDS | 2782998 | 2046 | - | 0.407136 |
| NA | BF3202 | conserved hypothetical protein | chromosome | CDS | 3630798 | 456 | - | 0.357456 |
| NA | BF0421 | conserved hypothetical protein | chromosome | CDS | 491601 | 1242 | + | 0.461353 |
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