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2024-05-03 21:25:15

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Nocardia farcinica IFM 10152, IFM 10152

Number of genes found: 140

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Nocardia farcinica IFM 10152, IFM 10152
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA nfa22800 putative peptidasechromosome CDS2456472 2082 + 0.71806
NA nfa52250 putative proteasechromosome CDS5518112 1095 - 0.745205
NA pnf1445 hypothetical proteinpNF1 CDS51565 639 + 0.651017
NA nfa17820 putative ribosylglycohydrolasechromosome CDS1942659 936 - 0.736111
NA nfa54130 hypothetical proteinchromosome CDS5722675 1848 + 0.760823
NA nfa37350 hypothetical proteinchromosome CDS3954225 444 + 0.677928
NA nfa2780 hypothetical proteinchromosome CDS286408 453 - 0.713024
NA nfa46440 hypothetical proteinchromosome CDS4834078 294 - 0.70068
NA nfa18780 putative thioredoxinchromosome CDS2052557 375 - 0.677333
NA nfa54250 hypothetical proteinchromosome CDS5741589 1368 + 0.720029
NA nfa52850 putative thioredoxin reductasechromosome CDS5585322 1665 + 0.718919
NA pnf1180 putative ATP-binding proteinpNF1 CDS15272 912 + 0.674342
NA nfa30940 hypothetical proteinchromosome CDS3278479 582 + 0.745704
NA nfa5870 putative ABC transporter ATP-binding proteinchromosome CDS607946 1836 + 0.747821
NA nfa3490 hypothetical proteinchromosome CDS358634 630 + 0.768254
NA nfa4150 putative Clp proteasechromosome CDS433460 2556 + 0.6741
NA pnf1520 hypothetical proteinpNF1 CDS57825 942 - 0.687898
NA nfa17190 hypothetical proteinchromosome CDS1869415 981 - 0.77472
NA nfa38520 putative peptidyl-prolyl cis-trans isomerasechromosome CDS4069372 594 + 0.727273
NA nfa49620 putative proteasechromosome CDS5177604 1248 - 0.71234
NA nfa51560 putative cytochrome c biogenesis membrane proteinchromosome CDS5456156 1674 - 0.703106
NA nfa36720 hypothetical proteinchromosome CDS3887587 2154 - 0.72377
NA nfa13320 putative peptidyl-prolyl cis-trans isomerasechromosome CDS1490932 1398 + 0.692418
NA nfa9080 hypothetical proteinchromosome CDS1010552 882 + 0.774376
NA nfa52890 putative AAA ATPasechromosome CDS5589311 2268 + 0.761905
NA nfa47350 hypothetical proteinchromosome CDS4945303 1062 + 0.745763
NA nfa45140 putative oxidoreductasechromosome CDS4682461 966 + 0.73913
NA pnf1420 hypothetical proteinpNF1 CDS49051 678 + 0.687316
NA nfa8400 putative heat shock proteinchromosome CDS932870 459 - 0.636166
NA nfa48210 hypothetical proteinchromosome CDS5035892 2064 - 0.744186
NA nfa1800 hypothetical proteinchromosome CDS173218 1944 + 0.707305
NA nfa35860 hypothetical proteinchromosome CDS3796682 471 + 0.723992
NA nfa8820 hypothetical proteinchromosome CDS983875 702 + 0.730769
NA nfa2910 hypothetical proteinchromosome CDS306293 348 - 0.686782
NA pnf11110 hypothetical proteinpNF1 CDS137132 960 - 0.68125
NA nfa56400 putative peptidasechromosome CDS5981517 2034 - 0.688791
NA nfa8280 putative proteasechromosome CDS917267 1443 + 0.745669
NA nfa53720 putative transcriptional regulatorchromosome CDS5675317 2604 - 0.725038
NA nfa56180 putative ATP-dependent proteasechromosome CDS5956636 2436 - 0.711412
NA nfa34720 hypothetical proteinchromosome CDS3682098 432 - 0.710648
NA nfa18570 hypothetical proteinchromosome CDS2027817 462 - 0.71645
NA nfa16410 hypothetical proteinchromosome CDS1791364 690 + 0.715942
NA pnf1450 putative thioredoxinpNF1 CDS52200 663 + 0.653092
NA nfa52230 hypothetical proteinchromosome CDS5516799 747 + 0.706827
NA nfa25170 hypothetical proteinchromosome CDS2682290 942 - 0.71656
NA nfa2450 hypothetical proteinchromosome CDS251458 1455 + 0.668041
NA pnf1430 hypothetical proteinpNF1 CDS49747 612 - 0.674837
NA nfa6570 putative peptidyl-prolyl cis-trans isomerasechromosome CDS678653 360 - 0.675
NA nfa34710 hypothetical proteinchromosome CDS3680869 1230 - 0.695122
NA nfa35580 putative ABC transporter ATP-binding proteinchromosome CDS3766060 777 - 0.680824
NA nfa46650 putative glutathione peroxidasechromosome CDS4864907 495 + 0.684848
NA nfa3510 putative proteasechromosome CDS360166 1194 + 0.731993
NA nfa22060 hypothetical proteinchromosome CDS2380550 867 + 0.726644
NA nfa35670 putative cytochrome oxidase assembly proteinchromosome CDS3775716 975 + 0.730256
NA nfa56620 putative thioredoxin reductasechromosome CDS6006971 987 + 0.701114
NA nfa49110 hypothetical proteinchromosome CDS5125360 1581 - 0.703352
NA nfa7000 putative kinasechromosome CDS726838 531 - 0.632768
NA nfa5960 putative thioredoxinchromosome CDS614966 447 - 0.727069
NA nfa35600 hypothetical proteinchromosome CDS3768070 1458 - 0.660494
NA nfa44010 putative organic hydroperoxide resistance proteinchromosome CDS4561503 423 - 0.725768
NA nfa41740 hypothetical proteinchromosome CDS4323901 459 - 0.69281
NA nfa51550 putative cytochrome c assembly proteinchromosome CDS5455185 969 - 0.684211
NA nfa52870 hypothetical proteinchromosome CDS5588498 351 + 0.698006
NA nfa8850 hypothetical proteinchromosome CDS986171 1542 - 0.738003
NA nfa52460 hypothetical proteinchromosome CDS5545143 1011 + 0.723046
NA nfa51490 putative Clp protease subunitchromosome CDS5451984 570 - 0.74386
NA nfa10770 putative thioredoxinchromosome CDS1190538 837 + 0.732378
NA nfa12640 hypothetical proteinchromosome CDS1416378 471 - 0.681529
NA nfa51720 hypothetical proteinchromosome CDS5471124 210 - 0.67619
NA nfa48720 hypothetical proteinchromosome CDS5084744 786 + 0.637405
NA nfa16100 hypothetical proteinchromosome CDS1761156 480 - 0.66875
NA pnf1830 hypothetical proteinpNF1 CDS95453 666 + 0.660661
NA nfa8090 hypothetical proteinchromosome CDS877960 312 + 0.650641
NA nfa51210 putative peptidasechromosome CDS5422207 888 - 0.711712
NA nfa7550 putative ATP-dependent proteasechromosome CDS814372 1044 - 0.731801
NA nfa43730 hypothetical proteinchromosome CDS4534072 381 + 0.637795
NA nfa36750 hypothetical proteinchromosome CDS3892740 813 - 0.725707
NA nfa3760 hypothetical proteinchromosome CDS389785 561 + 0.709447
NA nfa13310 putative peptidyl-prolyl cis-trans isomerasechromosome CDS1490130 663 + 0.726999
NA nfa46900 hypothetical proteinchromosome CDS4893648 1098 + 0.701275
NA nfa6420 hypothetical proteinchromosome CDS663442 774 - 0.735142
NA nfa14050 putative sulfate ABC transporter permeasechromosome CDS1580572 846 + 0.702128
NA nfa40570 putative heat shock proteinchromosome CDS4204514 1683 - 0.718954
NA nfa20290 putative proteasechromosome CDS2210614 1200 + 0.74
NA nfa41420 putative magnesium chelatasechromosome CDS4289093 1509 - 0.752154
NA nfa31800 putative AAA ATPasechromosome CDS3373545 1761 - 0.653606
NA nfa36340 putative peptidasechromosome CDS3845093 453 + 0.772627
NA nfa39420 putative glutaredoxinchromosome CDS4139812 243 - 0.63786
NA nfa51570 putative cytochrome c biogenesis membrane proteinchromosome CDS5457826 831 - 0.730445
NA pnf1460 putative membrane proteinpNF1 CDS52859 810 + 0.662963
NA nfa53120 hypothetical proteinchromosome CDS5612765 522 + 0.722222
NA nfa14100 hypothetical proteinchromosome CDS1586571 2094 + 0.755014
NA nfa56630 putative thioredoxinchromosome CDS6008020 333 + 0.660661
NA nfa45340 hypothetical proteinchromosome CDS4707774 249 + 0.638554
NA nfa47800 hypothetical proteinchromosome CDS4990167 675 + 0.705185
NA nfa51580 putative cytochrome c biogenesis proteinchromosome CDS5458653 639 - 0.71205
NA nfa47310 putative proteasechromosome CDS4941281 1560 + 0.723077
NA nfa8490 putative proteasechromosome CDS941336 1368 - 0.717105
NA nfa1910 putative peptidyl-prolyl cis-trans isomerasechromosome CDS193469 498 - 0.644578
NA nfa18940 hypothetical proteinchromosome CDS2068889 885 + 0.690395
NA nfa6440 hypothetical proteinchromosome CDS665414 2844 + 0.752813
NA nfa45190 putative steroid dehydrogenasechromosome CDS4687609 792 - 0.661616
NA pnf11020 hypothetical proteinpNF1 CDS121976 1872 - 0.672009
NA nfa49360 hypothetical proteinchromosome CDS5155070 915 - 0.570492
NA nfa14870 hypothetical proteinchromosome CDS1659228 894 + 0.661074
NA nfa44510 hypothetical proteinchromosome CDS4619720 741 - 0.709852
NA nfa9870 hypothetical proteinchromosome CDS1093324 1068 + 0.761236
NA nfa4240 putative osmotically inducible proteinchromosome CDS442758 441 + 0.723356
NA nfa36650 putative peptidyl-prolyl cis-trans isomerasechromosome CDS3880912 879 + 0.704209
NA nfa8840 putative glycoproteasechromosome CDS985121 1035 + 0.736232
NA nfa10430 hypothetical proteinchromosome CDS1150380 1059 - 0.746931
NA nfa35590 hypothetical proteinchromosome CDS3766871 1200 - 0.729167
ahpC nfa37890 putative alkylhydroperoxide reductasechromosome CDS4009811 588 + 0.661565
clp3 nfa11710 putative Clp protease proteolytic subunitchromosome CDS1298680 606 + 0.691419
clp4 nfa11720 putative Clp protease proteolytic subunitchromosome CDS1299282 594 + 0.700337
clpB nfa54020 putative Clp protease ATP-binding subunitchromosome CDS5704757 2562 - 0.699454
clpP1 nfa13330 putative Clp protease proteolytic subunitchromosome CDS1492491 612 + 0.661765
clpP2 nfa13340 putative Clp protease proteolytic subunitchromosome CDS1493162 666 + 0.666667
clpX nfa13350 putative Clp protease ATP-binding subunitchromosome CDS1494150 1281 + 0.654176
clpX2 nfa52770 putative Clp protease subunitchromosome CDS5578489 732 - 0.696721
cyoE nfa35720 putative protoheme IX farnesyltransferasechromosome CDS3779657 936 - 0.695513
dnaJ nfa54070 putative heat shock proteinchromosome CDS5711647 1158 - 0.720207
dnaJ2 nfa14260 putative heat shock proteinchromosome CDS1603575 1155 + 0.72987
dnaK nfa54090 putative heat shock proteinchromosome CDS5713524 1848 - 0.662879
ftsH nfa3980 putative cell division proteinchromosome CDS417704 2391 + 0.704308
glnD nfa41620 putative protein PII uridylyltransferasechromosome CDS4308751 2454 - 0.732681
glnE nfa16610 putative glutamate-ammonia-ligase adenylyltransferasechromosome CDS1811043 3015 + 0.729022
groEL nfa8870 putative chaperonin GroELchromosome CDS988791 1611 + 0.705152
groEL2 nfa52750 putative chaperonin GroELchromosome CDS5576327 1626 - 0.688807
groES nfa8860 putative chaperonin GroESchromosome CDS988339 303 + 0.663366
grpE nfa54080 putative heat shock proteinchromosome CDS5712844 684 - 0.717836
htpG nfa1150 putative heat shock proteinchromosome CDS105241 1959 + 0.649311
msrA nfa32240 putative peptide methionine sulfoxide reductasechromosome CDS3428749 513 - 0.68616
nrdH nfa43090 putative glutaredoxinchromosome CDS4468304 234 - 0.666667
prcA nfa31710 putative proteasome alpha subunitchromosome CDS3366152 777 - 0.693694
prcB nfa31720 putative proteasome beta subunitchromosome CDS3366925 867 - 0.696655
smpB nfa44800 putative small protein Bchromosome CDS4644275 483 - 0.658385
sms nfa4320 putative DNA repair proteinchromosome CDS448069 1389 - 0.725702
ureF nfa25390 putative urease accessory proteinchromosome CDS2702254 651 + 0.763441
ureG nfa25400 putative urease accessory proteinchromosome CDS2702932 717 + 0.708508