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2024-05-09 21:36:23

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Lactobacillus plantarum WCFS1, WCFS1

Number of genes found: 68

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus plantarum WCFS1, WCFS1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
agrB lp_3582 accesory gene regulator protein B chromosome CDS3198422 603 - 0.348259
clpB lp_1903 ATP-dependent Clp protease, ATP-binding subunit ClpB chromosome CDS1719289 2604 - 0.482335
clpC lp_1019 ATP-dependent Clp protease, ATP-binding subunit ClpC chromosome CDS936430 2514 + 0.466189
clpE lp_1269 ATP-dependent Clp protease, ATP-binding subunit ClpE chromosome CDS1154100 2220 - 0.473423
clpL lp_3583 ATP-dependent Clp protease, ATP-binding subunit ClpL chromosome CDS3199392 2115 - 0.40331
clpP lp_0786 endopeptidase Clp, proteolytic subunit chromosome CDS720764 591 - 0.41286
clpX lp_2116 ATP-dependent Clp protease, ATP-binding subunit ClpX chromosome CDS1909830 1266 - 0.432859
cps1A lp_1177 polysaccharide biosynthesis protein chromosome CDS1074307 993 + 0.330312
cps3G lp_1224 polysaccharide biosynthesis protein (putative) chromosome CDS1112511 222 + 0.454955
cydC lp_1128 cytochrome D ABC transporter, ATP-binding and permease protein chromosome CDS1026446 1734 + 0.470588
cydD lp_1129 cytochrome D ABC transporter, ATP-binding and permease protein chromosome CDS1028179 1761 + 0.480409
dnaJ lp_2026 chaperone protein DnaJ chromosome CDS1825336 1143 - 0.492563
dnaK lp_2027 heat shock protein DnaK chromosome CDS1826580 1869 - 0.441413
ftsH lp_0547 cell division protein FtsH, ATP-dependent zinc metallopeptidase chromosome CDS496382 2238 + 0.461573
gcp lp_0721 O-sialoglycoprotein endopeptidase chromosome CDS659208 1047 + 0.467049
gpo lp_0220 glutathione peroxidase chromosome CDS202845 486 + 0.479424
gpp lp_0717 glycoprotein endopeptidase chromosome CDS657467 726 + 0.479339
groEL lp_0728 GroEL chaperonin chromosome CDS665344 1626 + 0.436039
groES lp_0727 GroES co-chaperonin chromosome CDS665004 285 + 0.424561
grpE lp_2028 heat shock protein GrpE chromosome CDS1828492 600 - 0.493333
hslU lp_1845 ATP-dependent Hsl protease, ATP-binding subunit HslU chromosome CDS1666964 1419 - 0.448908
hslV lp_1846 ATP-dependent protease HslV chromosome CDS1668400 543 - 0.471455
hsp1 lp_0129 small heat shock protein chromosome CDS114984 423 + 0.423168
hsp2 lp_2668 small heat shock protein chromosome CDS2371601 420 - 0.495238
hsp3 lp_3352 small heat shock protein chromosome CDS2981556 444 - 0.400901
hsp33 lp_0548 heat shock protein HSP33 chromosome CDS498768 888 + 0.458333
htpX lp_0516 cell surface zinc metalloproteinase chromosome CDS461680 900 + 0.48
htrA lp_0043 serine protease HtrA chromosome CDS43821 1263 + 0.450515
lp_0332 lp_0332 unknown chromosome CDS304632 903 - 0.451827
lp_0628 lp_0628 prophage Lp1 protein 5 chromosome CDS593481 1047 - 0.380134
lp_0663 lp_0663 prophage Lp1 protein 40 chromosome CDS611278 945 + 0.410582
lp_0742 lp_0742 integral membrane protein chromosome CDS679341 1176 + 0.47449
lp_0858 lp_0858 redox protein, regulator of disulfide bond formation (putative) chromosome CDS800043 420 + 0.511905
lp_0918 lp_0918 unknown chromosome CDS848004 2964 + 0.407895
lp_1023 lp_1023 type 4 prepilin-like proteins leader peptide processing enzyme (putative) chromosome CDS947887 681 - 0.490455
lp_1468 lp_1468 ABC transporter, ATP-binding protein chromosome CDS1345128 798 + 0.429825
lp_1469 lp_1469 ABC transporter component (putative) chromosome CDS1345938 1302 + 0.484639
lp_1472 lp_1472 ABC transporter component, iron regulated (putative) chromosome CDS1348912 1407 + 0.459844
lp_1690 lp_1690 integral membrane protein chromosome CDS1539151 870 + 0.457471
lp_2419 lp_2419 prophage Lp2 protein 38 chromosome CDS2180825 945 - 0.385185
mecA lp_2227 negative regulator of competence chromosome CDS2010408 732 - 0.389344
mrsA1 lp_1339 protein-methionine-S-oxide reductase chromosome CDS1232512 804 - 0.451493
msrA2 lp_1835 protein-methionine-S-oxide reductase chromosome CDS1657083 516 - 0.46124
msrA3 lp_1836 protein-methionine-S-oxide reductase chromosome CDS1657626 435 - 0.452874
msrA4 lp_1979 protein-methionine-S-oxide reductase chromosome CDS1791058 531 - 0.467043
nrdG lp_2931 anaerobic ribonucleotide reductase activator protein chromosome CDS2611117 549 - 0.429872
nrdH lp_0694 glutaredoxin-like protein NrdH chromosome CDS640885 231 - 0.402597
orf28 hypothetical proteinSubName: Full=Uncharacterized protein; pWCFS103 CDS20549 369 - 0.422764
orf40 hypothetical proteinSubName: Full=Uncharacterized protein; pWCFS103 CDS31088 279 + 0.354839
pepO lp_3445 endopeptidase PepO chromosome CDS3053206 1917 + 0.466354
pflA1 lp_2596 formate acetyltransferase activating enzyme chromosome CDS2313948 804 - 0.401741
pflA2 lp_3314 formate acetyltransferase activating enzyme chromosome CDS2951354 822 + 0.462287
ppiB lp_2231c peptidylprolyl isomerase chromosome CDS2022077 585 - 0.442735
prtM1 lp_1452 peptidylprolyl isomerase chromosome CDS1329379 897 - 0.403567
prtM2 lp_3193 peptidylprolyl isomerase chromosome CDS2845767 930 - 0.431183
radA lp_0606 DNA repair protein RadA chromosome CDS576649 1380 + 0.466667
smpB lp_0799 SSRA RNA binding protein chromosome CDS735715 471 + 0.473461
tig lp_2118 trigger factor chromosome CDS1911390 1323 - 0.415722
tpx lp_2323 thiol peroxidase chromosome CDS2100621 495 - 0.438384
trxA1 lp_0236 thioredoxin chromosome CDS215474 333 + 0.465465
trxA2 lp_2270 thioredoxin chromosome CDS2049902 312 - 0.455128
trxA3 lp_3437 thioredoxin chromosome CDS3050198 321 + 0.439252
trxB1 lp_0761 thioredoxin reductase (NADPH) chromosome CDS695482 939 + 0.465389
trxB2 lp_2585 thioredoxin reductase (NADPH) chromosome CDS2303818 996 - 0.488956
trxH lp_2633 thioredoxin H-type chromosome CDS2344959 321 - 0.433022
zmp2 lp_0600 extracellular zinc metalloproteinase (putative) chromosome CDS571808 693 + 0.455988
zmp3 lp_2988 extracellular zinc metalloproteinase (putative) chromosome CDS2659091 801 - 0.474407
zmp4 lp_3043 extracellular zinc metalloproteinase chromosome CDS2704867 1035 + 0.403865