Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Lactobacillus plantarum WCFS1, WCFS1
Number of genes found: 68
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Lactobacillus plantarum WCFS1, WCFS1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
agrB | lp_3582 | accesory gene regulator protein B | chromosome | CDS | 3198422 | 603 | - | 0.348259 |
clpB | lp_1903 | ATP-dependent Clp protease, ATP-binding subunit ClpB | chromosome | CDS | 1719289 | 2604 | - | 0.482335 |
clpC | lp_1019 | ATP-dependent Clp protease, ATP-binding subunit ClpC | chromosome | CDS | 936430 | 2514 | + | 0.466189 |
clpE | lp_1269 | ATP-dependent Clp protease, ATP-binding subunit ClpE | chromosome | CDS | 1154100 | 2220 | - | 0.473423 |
clpL | lp_3583 | ATP-dependent Clp protease, ATP-binding subunit ClpL | chromosome | CDS | 3199392 | 2115 | - | 0.40331 |
clpP | lp_0786 | endopeptidase Clp, proteolytic subunit | chromosome | CDS | 720764 | 591 | - | 0.41286 |
clpX | lp_2116 | ATP-dependent Clp protease, ATP-binding subunit ClpX | chromosome | CDS | 1909830 | 1266 | - | 0.432859 |
cps1A | lp_1177 | polysaccharide biosynthesis protein | chromosome | CDS | 1074307 | 993 | + | 0.330312 |
cps3G | lp_1224 | polysaccharide biosynthesis protein (putative) | chromosome | CDS | 1112511 | 222 | + | 0.454955 |
cydC | lp_1128 | cytochrome D ABC transporter, ATP-binding and permease protein | chromosome | CDS | 1026446 | 1734 | + | 0.470588 |
cydD | lp_1129 | cytochrome D ABC transporter, ATP-binding and permease protein | chromosome | CDS | 1028179 | 1761 | + | 0.480409 |
dnaJ | lp_2026 | chaperone protein DnaJ | chromosome | CDS | 1825336 | 1143 | - | 0.492563 |
dnaK | lp_2027 | heat shock protein DnaK | chromosome | CDS | 1826580 | 1869 | - | 0.441413 |
ftsH | lp_0547 | cell division protein FtsH, ATP-dependent zinc metallopeptidase | chromosome | CDS | 496382 | 2238 | + | 0.461573 |
gcp | lp_0721 | O-sialoglycoprotein endopeptidase | chromosome | CDS | 659208 | 1047 | + | 0.467049 |
gpo | lp_0220 | glutathione peroxidase | chromosome | CDS | 202845 | 486 | + | 0.479424 |
gpp | lp_0717 | glycoprotein endopeptidase | chromosome | CDS | 657467 | 726 | + | 0.479339 |
groEL | lp_0728 | GroEL chaperonin | chromosome | CDS | 665344 | 1626 | + | 0.436039 |
groES | lp_0727 | GroES co-chaperonin | chromosome | CDS | 665004 | 285 | + | 0.424561 |
grpE | lp_2028 | heat shock protein GrpE | chromosome | CDS | 1828492 | 600 | - | 0.493333 |
hslU | lp_1845 | ATP-dependent Hsl protease, ATP-binding subunit HslU | chromosome | CDS | 1666964 | 1419 | - | 0.448908 |
hslV | lp_1846 | ATP-dependent protease HslV | chromosome | CDS | 1668400 | 543 | - | 0.471455 |
hsp1 | lp_0129 | small heat shock protein | chromosome | CDS | 114984 | 423 | + | 0.423168 |
hsp2 | lp_2668 | small heat shock protein | chromosome | CDS | 2371601 | 420 | - | 0.495238 |
hsp3 | lp_3352 | small heat shock protein | chromosome | CDS | 2981556 | 444 | - | 0.400901 |
hsp33 | lp_0548 | heat shock protein HSP33 | chromosome | CDS | 498768 | 888 | + | 0.458333 |
htpX | lp_0516 | cell surface zinc metalloproteinase | chromosome | CDS | 461680 | 900 | + | 0.48 |
htrA | lp_0043 | serine protease HtrA | chromosome | CDS | 43821 | 1263 | + | 0.450515 |
lp_0332 | lp_0332 | unknown | chromosome | CDS | 304632 | 903 | - | 0.451827 |
lp_0628 | lp_0628 | prophage Lp1 protein 5 | chromosome | CDS | 593481 | 1047 | - | 0.380134 |
lp_0663 | lp_0663 | prophage Lp1 protein 40 | chromosome | CDS | 611278 | 945 | + | 0.410582 |
lp_0742 | lp_0742 | integral membrane protein | chromosome | CDS | 679341 | 1176 | + | 0.47449 |
lp_0858 | lp_0858 | redox protein, regulator of disulfide bond formation (putative) | chromosome | CDS | 800043 | 420 | + | 0.511905 |
lp_0918 | lp_0918 | unknown | chromosome | CDS | 848004 | 2964 | + | 0.407895 |
lp_1023 | lp_1023 | type 4 prepilin-like proteins leader peptide processing enzyme (putative) | chromosome | CDS | 947887 | 681 | - | 0.490455 |
lp_1468 | lp_1468 | ABC transporter, ATP-binding protein | chromosome | CDS | 1345128 | 798 | + | 0.429825 |
lp_1469 | lp_1469 | ABC transporter component (putative) | chromosome | CDS | 1345938 | 1302 | + | 0.484639 |
lp_1472 | lp_1472 | ABC transporter component, iron regulated (putative) | chromosome | CDS | 1348912 | 1407 | + | 0.459844 |
lp_1690 | lp_1690 | integral membrane protein | chromosome | CDS | 1539151 | 870 | + | 0.457471 |
lp_2419 | lp_2419 | prophage Lp2 protein 38 | chromosome | CDS | 2180825 | 945 | - | 0.385185 |
mecA | lp_2227 | negative regulator of competence | chromosome | CDS | 2010408 | 732 | - | 0.389344 |
mrsA1 | lp_1339 | protein-methionine-S-oxide reductase | chromosome | CDS | 1232512 | 804 | - | 0.451493 |
msrA2 | lp_1835 | protein-methionine-S-oxide reductase | chromosome | CDS | 1657083 | 516 | - | 0.46124 |
msrA3 | lp_1836 | protein-methionine-S-oxide reductase | chromosome | CDS | 1657626 | 435 | - | 0.452874 |
msrA4 | lp_1979 | protein-methionine-S-oxide reductase | chromosome | CDS | 1791058 | 531 | - | 0.467043 |
nrdG | lp_2931 | anaerobic ribonucleotide reductase activator protein | chromosome | CDS | 2611117 | 549 | - | 0.429872 |
nrdH | lp_0694 | glutaredoxin-like protein NrdH | chromosome | CDS | 640885 | 231 | - | 0.402597 |
orf28 | hypothetical protein | pWCFS103 | CDS | 20549 | 369 | - | 0.422764 | |
orf40 | hypothetical protein | pWCFS103 | CDS | 31088 | 279 | + | 0.354839 | |
pepO | lp_3445 | endopeptidase PepO | chromosome | CDS | 3053206 | 1917 | + | 0.466354 |
pflA1 | lp_2596 | formate acetyltransferase activating enzyme | chromosome | CDS | 2313948 | 804 | - | 0.401741 |
pflA2 | lp_3314 | formate acetyltransferase activating enzyme | chromosome | CDS | 2951354 | 822 | + | 0.462287 |
ppiB | lp_2231c | peptidylprolyl isomerase | chromosome | CDS | 2022077 | 585 | - | 0.442735 |
prtM1 | lp_1452 | peptidylprolyl isomerase | chromosome | CDS | 1329379 | 897 | - | 0.403567 |
prtM2 | lp_3193 | peptidylprolyl isomerase | chromosome | CDS | 2845767 | 930 | - | 0.431183 |
radA | lp_0606 | DNA repair protein RadA | chromosome | CDS | 576649 | 1380 | + | 0.466667 |
smpB | lp_0799 | SSRA RNA binding protein | chromosome | CDS | 735715 | 471 | + | 0.473461 |
tig | lp_2118 | trigger factor | chromosome | CDS | 1911390 | 1323 | - | 0.415722 |
tpx | lp_2323 | thiol peroxidase | chromosome | CDS | 2100621 | 495 | - | 0.438384 |
trxA1 | lp_0236 | thioredoxin | chromosome | CDS | 215474 | 333 | + | 0.465465 |
trxA2 | lp_2270 | thioredoxin | chromosome | CDS | 2049902 | 312 | - | 0.455128 |
trxA3 | lp_3437 | thioredoxin | chromosome | CDS | 3050198 | 321 | + | 0.439252 |
trxB1 | lp_0761 | thioredoxin reductase (NADPH) | chromosome | CDS | 695482 | 939 | + | 0.465389 |
trxB2 | lp_2585 | thioredoxin reductase (NADPH) | chromosome | CDS | 2303818 | 996 | - | 0.488956 |
trxH | lp_2633 | thioredoxin H-type | chromosome | CDS | 2344959 | 321 | - | 0.433022 |
zmp2 | lp_0600 | extracellular zinc metalloproteinase (putative) | chromosome | CDS | 571808 | 693 | + | 0.455988 |
zmp3 | lp_2988 | extracellular zinc metalloproteinase (putative) | chromosome | CDS | 2659091 | 801 | - | 0.474407 |
zmp4 | lp_3043 | extracellular zinc metalloproteinase | chromosome | CDS | 2704867 | 1035 | + | 0.403865 |