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2024-05-20 00:11:51

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Yersinia pestis CO92, CO92

Number of genes found: 137

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Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
YPO0127 conserved hypothetical protein chromosome CDS138908 576 - 0.46875
YPO0130 putative exported protein chromosome CDS141277 270 + 0.440741
YPO0176 conserved hypothetical protein chromosome CDS196094 408 + 0.490196
YPO0275 conserved hypothetical protein chromosome CDS275051 270 + 0.548148
YPO0392 hypothetical protein chromosome CDS408824 723 + 0.304288
YPO0398 M48 peptidase family protein chromosome CDS414848 1047 - 0.526266
YPO0572 putative exported protein chromosome CDS616951 381 - 0.464567
YPO0630 conserved hypothetical protein chromosome CDS689923 717 - 0.492329
YPO0695 putative membrane protein chromosome CDS756287 423 - 0.385343
YPO0801 conserved hypothetical protein chromosome CDS881326 636 + 0.47956
YPO0806 prepilin peptidase chromosome CDS885548 843 - 0.358244
YPO0927 putative lipoprotein chromosome CDS1018815 753 + 0.488712
YPO0953 conserved hypothetical protein chromosome CDS1051868 273 + 0.410256
YPO1107 heat shock protein GrpE chromosome CDS1250712 579 + 0.47323
YPO1314 putative glutathione S-transferase-family protein chromosome CDS1478270 621 - 0.489533
YPO1342 putative SPFH domain protein chromosome CDS1505975 927 + 0.399137
YPO1431 putative Lon protease chromosome CDS1623958 1773 - 0.51269
YPO1471 putative ATPase subunit of ATP-dependent protease chromosome CDS1663153 2643 + 0.592508
YPO1706 putative heat shock protein chromosome CDS1946824 882 + 0.470522
YPO1947 putative thioredoxin chromosome CDS2209511 498 + 0.473896
YPO2072 conserved hypothetical protein chromosome CDS2352409 699 + 0.549356
YPO2158 conserved hypothetical protein chromosome CDS2428492 414 + 0.454106
YPO2372 conserved hypothetical protein chromosome CDS2664395 1113 - 0.520216
YPO2383 conserved hypothetical protein chromosome CDS2677911 351 - 0.461538
YPO2401 conserved hypothetical protein chromosome CDS2697627 1224 - 0.497549
YPO2402 putative ATP-dependent transporter chromosome CDS2698927 747 - 0.455154
YPO2403 conserved hypothetical protein chromosome CDS2699859 1512 - 0.494048
YPO2588 putative ABC transport protein chromosome CDS2910755 1896 + 0.464135
YPO2743 putative cytochrome c-type biogenesis protein chromosome CDS3072352 1227 + 0.495518
YPO2840 putative heat shock protein chromosome CDS3169623 1353 + 0.543976
YPO2855 putative protease chromosome CDS3191246 1395 + 0.496057
YPO3082 putative thioredoxin chromosome CDS3438325 870 + 0.508046
YPO3083 conserved hypothetical protein chromosome CDS3439389 915 + 0.469945
YPO3084 putative membrane protein chromosome CDS3440306 450 + 0.502222
YPO3374 conserved hypothetical protein chromosome CDS3762687 672 - 0.491071
YPO3479 putative protease chromosome CDS3884810 996 + 0.5251
YPO3480 conserved hypothetical protein chromosome CDS3885817 879 + 0.505119
YPO3639 putative glutathione S-transferase chromosome CDS4060304 855 - 0.495906
YPO3641 hypothetical protein chromosome CDS4062862 1176 - 0.460884
YPO3821 conserved hypothetical protein chromosome CDS4287625 255 - 0.513726
YPO3874 putative exported protein chromosome CDS4349644 792 + 0.340909
YPO3902 putative magnesium chelatase family protein chromosome CDS4375698 1524 + 0.534121
YPO3916 putative peroxiredoxin/glutaredoxin family protein chromosome CDS4398338 732 + 0.463115
aat putative leucyl/phenylalanyl-tRNA-protein transferase chromosome CDS1539144 711 - 0.495077
ahpC putative alkyl hydroperoxide reductase subunit c chromosome CDS3555984 603 + 0.472637
bcp bacterioferritin comigratory protein chromosome CDS3420930 474 + 0.440928
btuE putative vitamin B12 transport protein chromosome CDS2725126 555 - 0.445045
ccmA putative heme exporter protein A chromosome CDS3066438 657 + 0.494673
ccmB heme exporter protein B chromosome CDS3067064 660 + 0.521212
ccmC putative heme exporter protein C chromosome CDS3067786 738 + 0.501355
ccmE putative cytochrome c-type biogenesis protein chromosome CDS3068819 495 + 0.511111
ccmF putative cytochrome c-type biogenesis protein chromosome CDS3069310 1971 + 0.524099
ccmG thiol:disulfide interchange protein DsbE chromosome CDS3071277 567 + 0.497355
ccmH putative cytochrome c-type biogenesis protein chromosome CDS3071840 513 + 0.465887
clpA ATP-dependent Clp protease ATP-binding subunit chromosome CDS1535361 2277 + 0.49451
clpB putative Clp ATPase chromosome CDS539850 2604 + 0.534562
clpB Clp ATPase chromosome CDS3654692 2574 - 0.479021
clpB2 Clp ATPase chromosome CDS4006884 2604 + 0.53149
clpB3 Clp ATPase chromosome CDS1076980 2649 - 0.585126
clpB5 Clp ATPase chromosome CDS3289145 2676 - 0.479447
clpP ATP-dependent Clp protease proteolytic subunit ClpP chromosome CDS3520559 624 - 0.461538
clpX ATP-dependent Clp protease ATP-binding subunit ClpX chromosome CDS3519082 1272 - 0.481132
cydC transport ATP-binding protein chromosome CDS1540073 1725 - 0.515942
cydD transport ATP-binding protein chromosome CDS1541800 1785 - 0.505882
cyoE protoheme IX farnesyltransferase chromosome CDS3531536 891 + 0.465769
cysT sulfate transport system permease protein CysT chromosome CDS3367987 834 - 0.53717
degQ protease chromosome CDS3978818 1374 + 0.487627
degS protease chromosome CDS3980992 1089 + 0.481175
djlA DnaJ-like protein chromosome CDS528654 834 + 0.5
dnaJ chaperone protein DnaJ chromosome CDS499361 1140 + 0.499123
dnaK chaperone protein DnaK chromosome CDS497339 1911 + 0.480377
dsbA secreted thiol:disulfide interchange protein DsbA chromosome CDS21806 624 + 0.421474
dsbB disulfide bond formation protein B chromosome CDS2409795 531 - 0.463277
dsbC thiol:disulfide interchange protein (DsbC) chromosome CDS976288 717 - 0.456067
dsbD thiol:disulfide interchange protein chromosome CDS354798 1788 - 0.522371
fdhE putative formate dehydrogenase formation protein chromosome CDS4573079 930 - 0.495699
fklB FKBP-type peptidyl-prolyl cis-trans isomerase chromosome CDS3944826 621 - 0.520129
fkpA peptidyl-prolyl cis-trans isomerase chromosome CDS212265 801 + 0.458177
fkpB FKBP-type peptidyl-prolyl cis-trans isomerase chromosome CDS508128 459 + 0.481481
flgA flagella basal body P-ring formation protein FlgA chromosome CDS2043452 699 - 0.520744
flgA putative flagella basal body P-ring formation protein chromosome CDS781445 714 - 0.512605
flgJ putative flagellar protein chromosome CDS789374 294 + 0.503401
flgJ flagellar protein FlgJ chromosome CDS2050679 945 + 0.540741
flgN flagella synthesis protein FlgN chromosome CDS2042540 441 - 0.487528
fliJ flagellar protein FliJ chromosome CDS2071648 447 - 0.478747
fliS putative flagellar protein chromosome CDS801304 381 + 0.388451
fliS flagellar protein FliS chromosome CDS2084555 399 - 0.466165
fliT FliT chromosome CDS2084182 363 - 0.413223
ftsH cell division protein chromosome CDS3912179 1935 - 0.469767
gcp putative glycoprotease chromosome CDS703713 1014 + 0.518738
glnD [protein-PII] uridylyltransferase chromosome CDS1181397 2739 - 0.49215
glnE glutamate-ammonia-ligase adenylyltransferase chromosome CDS711220 2856 + 0.528011
groEL 60 kDa chaperonin chromosome CDS361583 1647 + 0.504554
groES 10 kDa chaperonin chromosome CDS361243 294 + 0.489796
grxA glutaredoxin 1 chromosome CDS1494106 264 - 0.439394
grxC glutaredoxin chromosome CDS77406 249 + 0.514056
gsrA global stress requirement protein GsrA chromosome CDS3774353 1446 - 0.498617
gst glutathione S-transferase chromosome CDS2660143 606 + 0.455446
hflC putative membrane protein chromosome CDS391138 1005 + 0.502488
hflK putative membrane protein chromosome CDS389875 1260 + 0.503175
hmwC putative accessory processing protein chromosome CDS3612864 1854 - 0.452535
hscA chaperone protein HscA chromosome CDS3235107 1953 - 0.546339
hscB chaperone protein HscB chromosome CDS3237302 525 - 0.506667
hslJ putative heat shock protein chromosome CDS2621105 453 + 0.437086
hslO heat-shock chaperonin chromosome CDS152714 882 - 0.492063
hslU ATP-binding heat shock protein chromosome CDS113213 1332 - 0.487988
hslV heat shock protein chromosome CDS114615 525 - 0.487619
htpG heat shock protein HtpG chromosome CDS3475894 1875 - 0.463467
ibpA heat shock protein chromosome CDS4606676 414 - 0.425121
ibpB heat shock protein chromosome CDS4605931 465 - 0.488172
lon ATP-dependent protease La chromosome CDS3516533 2355 - 0.480679
msrA peptide methionine sulfoxide reductase chromosome CDS3937294 639 + 0.532081
nrdG anaerobic ribonucleoside-triphosphate reductase activating protein chromosome CDS3863261 435 + 0.51954
nrdH putative glutaredoxin chromosome CDS2979500 237 - 0.447257
pcm protein-L-isoaspartate O-methyltransferase chromosome CDS3746383 627 - 0.496013
pcp putative pyrrolidone-carboxylate peptidase chromosome CDS3030775 648 + 0.498457
pflA pyruvate formate-lyase 1 activating enzyme chromosome CDS1555542 735 - 0.466667
ppiA peptidyl-prolyl cis-trans isomerase A chromosome CDS186131 570 + 0.452632
ppiB peptidyl-prolyl cis-trans isomerase B chromosome CDS3430215 495 + 0.466667
ppiC peptidyl-prolyl cis-trans isomerase C chromosome CDS4349124 282 + 0.450355
ppiD peptidyl-prolyl cis-trans isomerase D chromosome CDS3513856 1887 - 0.45469
ptrA protease III precursor chromosome CDS1153112 2889 + 0.467636
radA DNA repair protein RadA chromosome CDS463823 1383 + 0.544469
slyD peptidyl-prolyl cis-trans isomerase chromosome CDS210924 588 + 0.52551
smpB SsrA-binding protein (small protein B) chromosome CDS1246000 483 - 0.459627
sohB peptidase family U7 protein chromosome CDS2489189 1047 + 0.483286
sppA protease IV chromosome CDS2431177 1851 - 0.480281
sspA putative stringent starvation protein A chromosome CDS3974628 642 - 0.487539
surA survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) chromosome CDS524755 1305 - 0.485824
tig Trigger factor chromosome CDS3521644 1305 - 0.47433
tpx thiol peroxidase chromosome CDS2636489 504 + 0.492063
trxA thioredoxin 1 chromosome CDS4343502 327 - 0.461774
trxB thioredoxin reductase chromosome CDS1544025 963 - 0.515057
trxC thioredoxin 2 chromosome CDS3642614 438 + 0.502283
ureE urease accessory protein chromosome CDS2994309 696 + 0.491379
ureF urease accessory protein chromosome CDS2995026 687 + 0.490539
ureG urease accessory protein chromosome CDS2995839 663 + 0.484163