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2024-05-18 01:35:12

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Mycobacterium tuberculosis H37Rv, H37Rv

Number of genes found: 111

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Mycobacterium tuberculosis H37Rv, H37Rv
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Rv2877c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN chromosome CDS3188008 864 - 0.675926
NA Rv0376c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS453230 1143 - 0.695538
NA Rv1216c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN chromosome CDS1359472 675 - 0.598518
NA Rv0312 CONSERVED HYPOTHETICAL PROLINE AND THREONINE RICH PROTEIN chromosome CDS380556 1863 + 0.657005
NA Rv1487 CONSERVED MEMBRANE PROTEIN chromosome CDS1676941 435 + 0.671264
NA Rv2551c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2870775 420 - 0.735714
NA Rv0526 POSSIBLE THIOREDOXIN PROTEIN (THIOL-DISULFIDE INTERCHANGE PROTEIN) chromosome CDS616846 651 + 0.677419
NA Rv1488 POSSIBLE EXPORTED CONSERVED PROTEIN chromosome CDS1677397 1146 + 0.665794
NA Rv1977 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2219754 1047 + 0.653295
NA Rv1845c CONSERVED HYPOTHETICAL TRANSMEMBRANE PROTEIN chromosome CDS2095218 951 - 0.721346
NA Rv2264c conserved hypothetical proline rich protein chromosome CDS2536572 1779 - 0.690838
NA Rv0282 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS342130 1896 + 0.648207
NA Rv0198c PROBABLE ZINC METALLOPROTEASE chromosome CDS234516 1992 - 0.636546
NA Rv2674 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2990706 411 + 0.632603
NA Rv3673c POSSIBLE MEMBRANE-ANCHORED THIOREDOXIN-LIKE PROTEIN (THIOL-DISULFIDE INTERCHANGE RELATED PROTEIN) chromosome CDS4114474 684 - 0.697368
NA Rv3198A POSSIBLE GLUTAREDOXIN PROTEIN chromosome CDS3571335 255 + 0.580392
NA Rv1324 POSSIBLE THIOREDOXIN chromosome CDS1487161 915 + 0.655738
NA Rv3884c PROBABLE CBXX/CFQX FAMILY PROTEIN chromosome CDS4364979 1860 - 0.626882
NA Rv1002c CONSERVED MEMBRANE PROTEIN chromosome CDS1118428 1512 - 0.66336
NA Rv2897c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS3206431 1512 - 0.689815
NA Rv1732c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1959243 549 - 0.695811
NA Rv1456c PROBABLE UNIDENTIFIED ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE ABC TRANSPORTER chromosome CDS1641493 933 - 0.687031
NA Rv3238c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN chromosome CDS3613664 735 - 0.610884
NA Rv1798 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2036700 1833 + 0.634479
NA Rv3671c POSSIBLE MEMBRANE-ASSOCIATED SERINE PROTEASE chromosome CDS4112322 1194 - 0.662479
NA Rv2115c Probable ATPase chromosome CDS2374461 1830 - 0.620765
NA Rv0435c PUTATIVE CONSERVED ATPASE chromosome CDS522347 2187 - 0.689986
NA Rv1463 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER chromosome CDS1650716 801 + 0.651685
NA Rv0990c HYPOTHETICAL PROTEIN chromosome CDS1107443 657 - 0.686454
NA Rv1462 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1649526 1194 + 0.675879
NA Rv0372c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS448630 756 - 0.699735
NA Rv3090 HYPOTHETICAL ALANINE AND VALINE RICH PROTEIN chromosome CDS3458211 888 + 0.628378
NA Rv2969c POSSIBLE CONSERVED MEMBRANE OR SECRETED PROTEIN chromosome CDS3323709 768 - 0.632812
NA Rv0481c HYPOTHETICAL PROTEIN chromosome CDS569988 525 - 0.622857
NA Rv3868 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS4343314 1722 + 0.644019
NA Rv1043c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1165781 1026 - 0.643275
NA Rv2437 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2734376 420 + 0.640476
NA Rv1171 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1301307 441 + 0.657596
NA Rv1084 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1207636 2022 + 0.71909
NA Rv3421c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS3839059 636 - 0.701258
NA Rv0518 POSSIBLE EXPORTED PROTEIN chromosome CDS610188 696 + 0.656609
NA Rv0528 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN chromosome CDS618305 1590 + 0.7
NA Rv0508 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS600098 294 + 0.636054
NA Rv2541 HYPOTHETICAL ALANINE RICH PROTEIN chromosome CDS2864427 408 + 0.781863
NA Rv2923c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS3238086 414 - 0.678744
NA Rv2044c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2289282 318 - 0.641509
NA Rv2687c PROBABLE ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE LEUCINE AND VALINE RICH PROTEIN ABC TRANSPORTER chromosome CDS3004035 714 - 0.644258
ahpC Rv2428 ALKYL HYDROPEROXIDE REDUCTASE C PROTEIN AHPC (ALKYL HYDROPEROXIDASE C) chromosome CDS2726193 588 + 0.607143
ahpE Rv2238c Probable peroxiredoxin AhpE chromosome CDS2510715 462 - 0.627706
bcp Rv2521 PROBABLE BACTERIOFERRITIN COMIGRATORY PROTEIN BCP chromosome CDS2837684 474 + 0.628692
bcpB Rv1608c Probable peroxidoxin BcpB chromosome CDS1807298 465 - 0.612903
ccdA Rv0527 POSSIBLE CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCDA chromosome CDS617493 780 + 0.692308
ccsA Rv0529 POSSIBLE CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCSA chromosome CDS619891 975 + 0.681026
clpB Rv0384c PROBABLE ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB PROTEIN) (HEAT SHOCK PROTEIN F84.1) chromosome CDS459456 2547 - 0.685905
clpC1 Rv3596c PROBABLE ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC1 chromosome CDS4038158 2547 - 0.64625
clpC2 Rv2667 POSSIBLE ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC2 chromosome CDS2983896 759 + 0.675889
clpP1 Rv2461c PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 CLPP1 (ENDOPEPTIDASE CLP) chromosome CDS2763172 603 - 0.621891
clpP2 Rv2460c PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 2 CLPP2 (ENDOPEPTIDASE CLP 2) chromosome CDS2762531 645 - 0.617054
clpX Rv2457c PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX chromosome CDS2758208 1281 - 0.615925
ctaB Rv1451 PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR CTAB chromosome CDS1635029 927 + 0.661273
cydD Rv1621c PROBABLE 'COMPONENT LINKED WITH THE ASSEMBLY OF CYTOCHROME' TRANSPORT TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER CYDD chromosome CDS1821690 1584 - 0.686237
cysT Rv2399c PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER CYST chromosome CDS2695796 852 - 0.643192
dipZ Rv2874 POSSIBLE INTEGRAL MEMBRANE C-TYPE CYTOCHROME BIOGENESIS PROTEIN DIPZ chromosome CDS3184847 2088 + 0.623563
dnaJ1 Rv0352 PROBABLE CHAPERONE PROTEIN DNAJ1 chromosome CDS422452 1188 + 0.675084
dnaJ2 Rv2373c PROBABLE CHAPERONE PROTEIN DNAJ2 chromosome CDS2652839 1149 - 0.679721
dnaK Rv0350 PROBABLE CHAPERONE PROTEIN DNAK (HEAT SHOCK PROTEIN 70) (HEAT SHOCK 70 KDA PROTEIN) (HSP70) chromosome CDS419835 1878 + 0.634718
dsbF Rv1677 PROBABLE CONSERVED LIPOPROTEIN DSBF chromosome CDS1901748 549 + 0.635701
ftsH Rv3610c MEMBRANE-BOUND PROTEASE FTSH (CELL DIVISION PROTEIN) chromosome CDS4050601 2283 - 0.657906
gcp Rv3419c PROBABLE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE GCP (GLYCOPROTEASE) chromosome CDS3837555 1035 - 0.688889
glnD Rv2918c PROBABLE [PROTEIN-PII] URIDYLYLTRANSFERASE GLND (PII URIDYLYL-TRANSFERASE) (URIDYLYL REMOVING ENZYME) (UTASE) chromosome CDS3228254 2427 - 0.666667
glnE Rv2221c GLUTAMATE-AMMONIA-LIGASE ADENYLYLTRANSFERASE GLNE (Glutamine-synthetase adenylyltransferase) chromosome CDS2489369 2985 - 0.685092
groEL1 Rv3417c 60 KDA CHAPERONIN 1 GROEL1 (PROTEIN CPN60-1) (GROEL PROTEIN 1) chromosome CDS3835272 1620 - 0.651235
groEL2 Rv0440 60 KDA CHAPERONIN 2 GROEL2 (PROTEIN CPN60-2) (GROEL PROTEIN 2) (65 KDA ANTIGEN) (HEAT SHOCK PROTEIN 65) (CELL WALL PROTEIN A) (ANTIGEN A) chromosome CDS528608 1623 + 0.653728
groES Rv3418c 10 KDA CHAPERONIN GROES (PROTEIN CPN10) (PROTEIN GROES) (BCG-A HEAT SHOCK PROTEIN) (10 KDA ANTIGEN) chromosome CDS3836986 303 - 0.633663
grpE Rv0351 PROBABLE GRPE PROTEIN (HSP-70 COFACTOR) chromosome CDS421709 708 + 0.655367
hsp Rv0251c HEAT SHOCK PROTEIN HSP (HEAT-STRESS-INDUCED RIBOSOME-BINDING PROTEIN A) chromosome CDS302173 480 - 0.666667
hspX Rv2031c HEAT SHOCK PROTEIN HSPX (ALPHA-CRSTALLIN HOMOLOG) (14 kDa ANTIGEN) (HSP16.3) chromosome CDS2278498 435 - 0.616092
htpG Rv2299c PROBABLE CHAPERONE PROTEIN HTPG (HEAT SHOCK PROTEIN) (HSP90 FAMILY PROTEIN) (HIGH TEMPERATURE PROTEIN G) chromosome CDS2570059 1944 - 0.62037
htpX Rv0563 PROBABLE PROTEASE TRANSMEMBRANE PROTEIN HEAT SHOCK PROTEIN HTPX chromosome CDS653879 861 + 0.662021
htrA Rv1223 PROBABLE SERINE PROTEASE HTRA (DEGP PROTEIN) chromosome CDS1365875 1587 + 0.649653
mmpS5 Rv0677c POSSIBLE CONSERVED MEMBRANE PROTEIN MMPS5 chromosome CDS778477 429 - 0.615385
mpt53 Rv2878c SOLUBLE SECRETED ANTIGEN MPT53 PRECURSOR chromosome CDS3188876 522 - 0.626437
msrA Rv0137c PROBABLE PEPTIDE METHIONINE SULFOXIDE REDUCTASE MSRA (PROTEIN-METHIONINE-S-OXIDE REDUCTASE) (PEPTIDE MET(O) REDUCTASE) chromosome CDS164712 549 - 0.639344
mycP1 Rv3883c MEMBRANE-ANCHORED MYCOSIN MYCP1 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-1) chromosome CDS4363417 1341 - 0.688292
mycP2 Rv3886c PROBABLE ALANINE AND PROLINE RICH MEMBRANE-ANCHORED MYCOSIN MYCP2 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-2) chromosome CDS4368518 1653 - 0.679371
mycP3 Rv0291 PROBABLE MEMBRANE-ANCHORED MYCOSIN MYCP3 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-3) chromosome CDS354498 1386 + 0.701299
mycP4 Rv3449 PROBABLE MEMBRANE-ANCHORED MYCOSIN MYCP4 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-4) chromosome CDS3869752 1368 + 0.69152
mycP5 Rv1796 PROBABLE PROLINE RICH MEMBRANE-ANCHORED MYCOSIN MYCP5 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-5) chromosome CDS2033729 1758 + 0.656428
nrdH Rv3053c PROBABLE GLUTAREDOXIN ELECTRON TRANSPORT COMPONENT OF NRDEF (GLUTAREDOXIN-LIKE PROTEIN) NRDH chromosome CDS3414719 240 - 0.629167
pcp Rv0319 PROBABLE PYRROLIDONE-CARBOXYLATE PEPTIDASE PCP (5-OXOPROLYL-PEPTIDASE) (PYROGLUTAMYL-PEPTIDASE I) (PGP-I) (PYRASE) chromosome CDS387148 669 + 0.659193
pepA Rv0125 PROBABLE SERINE PROTEASE PEPA (SERINE PROTEINASE) (MTB32A) chromosome CDS151148 1068 + 0.680712
pepD Rv0983 PROBABLE SERINE PROTEASE PEPD (SERINE PROTEINASE) (MTB32B) chromosome CDS1099066 1395 + 0.666667
pflA Rv3138 PROBABLE PYRUVATE FORMATE LYASE ACTIVATING PROTEIN PFLA (FORMATE ACETYLTRANSFERASE ACTIVATING ENZYME) ([PYRUVATE FORMATE-LYASE] ACTIVATING ENZYME) chromosome CDS3504195 1089 + 0.618916
pknE Rv1743 PROBABLE TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE E PKNE (PROTEIN KINASE E) (STPK E) chromosome CDS1969004 1701 + 0.656673
ppiA Rv0009 PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A) chromosome CDS12468 549 + 0.624772
ppiB Rv2582 PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PPIB (CYCLOPHILIN) (PPIASE) (ROTAMASE) (PEPTIDYLPROLYL ISOMERASE) chromosome CDS2906814 927 + 0.640777
prcA Rv2109c proteasome (alpha subunit) PrcA chromosome CDS2368983 747 - 0.634538
prcB Rv2110c proteasome (beta subunit) PrcB chromosome CDS2369726 876 - 0.635845
radA Rv3585 DNA REPAIR PROTEIN RADA (DNA REPAIR PROTEIN SMS) chromosome CDS4026444 1443 + 0.679834
smpB Rv3100c PROBABLE SSRA-BINDING PROTEIN SMPB chromosome CDS3469301 483 - 0.641822
sppA Rv0724 POSSIBLE PROTEASE IV SPPA (ENDOPEPTIDASE IV) (SIGNAL PEPTIDE PEPTIDASE) chromosome CDS815663 1872 + 0.669872
thiX Rv0816c PROBABLE THIOREDOXIN THIX chromosome CDS909611 423 - 0.676123
tig Rv2462c PROBABLE TRIGGER FACTOR (TF) PROTEIN TIG chromosome CDS2763891 1401 - 0.650964
tpx Rv1932 PROBABLE THIOL PEROXIDASE TPX chromosome CDS2183372 498 + 0.654619
trxA Rv1470 PROBABLE THIOREDOXIN TRXA chromosome CDS1658980 375 + 0.573333
trxB1 Rv1471 PROBABLE THIOREDOXIN TRXB1 chromosome CDS1659370 372 + 0.634409
trxB2 Rv3913 PROBABLE THIOREDOXIN REDUCTASE TRXB2 (TRXR) (TR) chromosome CDS4401728 1008 + 0.660714
trxC Rv3914 THIOREDOXIN TRXC (TRX) (MPT46) chromosome CDS4402732 351 + 0.589744
ureD Rv1853 Probable urease accessory protein ureD chromosome CDS2101022 627 + 0.682616
ureF Rv1851 Urease accessory protein uref chromosome CDS2099694 636 + 0.710692
ureG Rv1852 Urease accessory protein ureG chromosome CDS2100340 675 + 0.672593