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# Dehalococcoides sp. CBDB1, CBDB1

>cbdbA1650 hypothetical protein
MACFLVVAGEAAVTTVVQKVIEKKEKQPGSEIKNISGLSWSRKLGWLNKM
LWGGTLLLALEHVWHGEVVPWWPFLTAMENPADIAPMLHEMATVGGAMAV
TVTVVWVIMVLIAEARLKASAKVNTAGTGV
>cbdbA1124 putative protein export protein
MAKKPQQPVKRHYSKHQVAKFEAQRKRQRIIFATGLSVIGIVLALVGIGV
YKGWYVDQYKPMHTTVLTVGDTKYNVAYFVDALRHFTGGDSQYAYYFIDA
VSERIQLNQLMVEKASEMGYTISDDEIDAAIEENSLTDVPAVRDIVRASL
LTDKLKTEYFDPQVPQTAEQREALAMLLESENAASDVLAGITTDEEFAAK
AAELSLESNTKTDSGSIGFKPAGTITSLYGSEILEKYIFSTEGYDYALVQ
DADVSKQRAYWLMEVLERKTDSEQIHTLGMLLPSEQVALEVKARLAAGES
WGDLAVEFSQLANVEENQGDMDWITFSSVPENVADIIFATDVELNTVLDP
IQDDTNYTRGGCWIVRLKSIDENRQLSEDDRKLLISDKLDQWTADLKAAN
LDKLTNTFSDELITFAITQLDK
>cbdbA1009 serine protease, DegP
MKKLFKNFFGLFISISLVLSMLLAQGCDILQDFSNSPEDNTQNQTNTQNL
PDQSDEIGSVPSPVNFVNAVKAVKPSVVSINVELVTRDIFGRTIVEQAAG
SGWIIDSNGIIVTNNHVVEDATSITVTLDDGRTFNSVAVRTYPANDLAVI
KINATNLPAVKLGDASKLAVGEPVAAIGNALGMGISMTGGWVSRLNTTVE
FSDTESLTGLIETDAAINPGNSGGPLVNYQGEVIGITSAKIQEVGVEGIG
YAISLYIALPIINNLISQLPA
>cbdbA1332 hypothetical membrane protein
MFYVFIGAVGFSLVHIFDFVALKRLPLLKPVLWLSGSALLLYSGFMVCFN
GDSLALPVWLSAAGWVVFAIGIYFFLYSLFINLPFGKTYVKTGVGDKLVT
SGFYALVRHPGVPWFVLAMAGMTLGAGTYFALWAAIIWSLLDIALVYIQD
RWVFGRMFPGYTQYQKTTPMLVPNRKSIAAYIKQRNFSNTIKGVAK
>cbdbA1220 serine protease, DegP
MEGVKSRWISIAVIALLVVVTGFNTAMLFQKSDQLSQAETKIDSLTQSLA
SLSGLGGDIAGLQQDLSTVQSQLQQVNTDLTCHACAVSDVVSLIEPAIVR
VDVSGRNFSASGSGTIVDNRGYILTNYHVIEGATTIRVTLMSGAIYSASV
VGSDTGRDVALLLMSATSGQEFPTVTLSTMADIKVGMDVVAAGFPLGTDL
AGPATFTKGIVSAMRTYEGYLYVQTDAAVNPGNSGGCMVNMDGLMIGIPS
AGIVPYGEDIEDINLVIPVSDIISFLALYI
>cbdbA600 putative thiol-disulfide oxidoreductase
MKSKLIALSFLLLSSLCLSACSQTTPVPADNGEQPVAGIKINNLAPDFSL
KNLTGQEIRLSNLQGSGVILNFWKISCSYCKQEMPFFEAAYLKNKALPSG
IKILMVNITENKSLIEQFLKDNRFTFPVLLDTTGATGQTYNANYIPITYF
INAEGIIKAIKFGAFSSQTDFDNQLNKIN
>cbdbA950 Mg chelatase, homolog
MLAKVSSCALIGLEGTIVEVEADISAGLPSFTIVGLPDTAIQEARERVRV
AIRNSGFTFPVKRIVANLAPADFKKAGPAYDLSIALAILISSEQLKADTS
QTLFLGELSLDGSLRHTSGILPMVALAYQKGYTNIIVPACDAREASLVEG
ASILPFTTLKEITEYLQGDRAAPKLSEFKEELKGTPPANYVDLAYIKGQE
NVKRALEVAAAGGHNMVMTGPPGSGKTMLARALVSILPTMTSAEALEVTK
LYSIAGLLPPNIPLIHSRPLRAPHYTISSAGLVGGGTFPKPGEISLSHRG
VLFLDELPEFGHSLLELLRQPLEDKTVTISRAQGSVSFPANFMLVGAMNP
CPCGFYGDNVKRCTCPPGLVTRYQRRISGPFLDRVDIVIDVPRIEYEKLS
SDRLGESSEIVSRRVENCRNIQLERFAKYKILSNAEMTPAEIRQFCTMED
TAQNLLRSATKQLFLSARAYHRILKLSRTIADLENNDIIKAHHLAEAIQY
RPRWQV
>cbdbA109 hypothetical protein
MASDYQKITSDNIRRRGEEFDDIGEWISEQFYSDRTHFIYELLQNAEDAL
SRRFRDNSDSKVPRRVQFRLYSNRLEFRHFGKLFTEDDVRAISDILKGTK
AIDQNQIGKFGIGFKSVYAFTSTPEVHSGDEHFFIERYIRPKNADQIPKL
EDQETLFVFPFNHDRVTPEDSLRSISNKLNNIGVRTLLFLKHINEIEWLV
GNDSKGTYLKEVRRRGDSRQVTVVGQNNGTEESEDWLMFERPVHHPGSTE
SVKVEIAFRVEVDGKTNKEKIVKSKASPLVVFFPTEQETRFGFLVQGPFL
PTPSRDNILKDSEWNKLLIREVAQLVSETLPKLKEMGFLNVSLLETLPIR
SDDFPADGIFRPIFESSLAVFGKLPLLPTDIGNYITAGNAKLARGADLRK
LIRPTQLQALCNSKQALQWLSGEITENQSPDLWKYLTQELKIEIIDPDSF
ARKIYLSFLETQDDDWIKEFYGYLLGQESLWRAARNSWDSPGILRNKELL
RLNDNKHVKPFKPDGQPYAFLPPTGGLNYPEIKSELTKNERSLEFLKKLG
IREVGERELIESLLKAYYVEDSPDPSLEDHIKHMSKFVAWFQKSGDKTLF
GGHFLFLDVNQQNYYTPDACYIDLPFKDTGVSCLFESDQQNEPDKVALWE
EYRNIGGFQEFAISLGAIDKVKIVKRSTYSHLAQDLLRQDYYQGARLTNT
QVDEDYFIEGLDIILRRKNINVSRLIWNTMRNADPNVLSARFRPNQQYNI
NTLPSSLVYYLQTNEWIPDKEGNFLSPKKLSNNLLRNDFVYDDRNGWMTA
IRFGSAAQEIAGEQQEKQKHAQALGIENLESIDIIKEIDKYPDLLVKIRS
IIDSEKNKVLFPSRPSQNPERREEKMAKEIQDTPEKTYEPRERSVRISLP
SKQDKETFLRESYTNSDGQMVCQICKNEMPFKKRNGHYYFEAVEVLSDQD
IEHEALYLALCPLCAAKYKEFVKRDAELIESLKESVIASEKPEIPVCLGQ
FQTTIKFVETHFLDLKTIIKKDT
>cbdbA1313 type IV prepilin leader peptidase family protein
MLISWIIFFFILGAILGSFINMLSDRLPAKKSIITPGSGCDVCGKRLGIA
DLIPIFSYIFLKGRCRYCGAGIPQRALWVEIATACLFGLFWVMLGPSVEL
GISLLYLCVFITLFVIDLEKGLILNVIIYPFMVLALLLSPLYLQGDGLLA
NLSSSFFGGLTGFGLFLLIYIASRGGMGEGDIKMAGFIGLVCGFPNIFVA
IFAGIVLGGLAAAGLMLSGKRRKGQTIPFGPFLAVGAVTAMLFGSQIMEW
YLALA
>cbdbA699 hypothetical protein
MKKGTQTALIVGGVALGAYVLMPKETKTQLIDGLTGGASGQEYAWSGLVE
GLFKTIDGLTAPITNIITGNGDNKGGSDVSLEEWQSALREAFGVQNPIDN
ILPNWTDNLTNPASYMAAGGQYARVAGAQLGAELLIGKSARLFPIPARNE
AHAVGKVTSSVIENFSNKAGLRVETTLAKRLGISTAETAIKAGASATIKT
GGRVMQTTAGTFLRKSIPGLTKGLTKAGIKGAIPKIAGKAVSRFIPGVGW
VLLGGDIAADFLRVLGLDMPEWLGISSIAGAFTGDNPLEAWISKGSGKVS
AAEMTVTQRYNMGTTGQTVTQRYNAPYLLPGSKDEYASAPTGWGHEVTLD
YVPPPPGQMVFIDAKPTGHGHEVFTV
>cbdbA969 redox-active disulfide protein 2
MIIKVLGTGCAKCNKLEEMTKEAVIELGLAAQIVKIKEVDKISAYPILMT
PALVIDEEVVISGKIPTKDEMLKLILSKSK
>cbdbA222 serine protease inhibitor family protein
MKIKHVFSLLAVASLFTLTACSGGVSAEELKSDKDRIANPNISQQDANIQ
AEANNDFAFKLYHFLKGTEEGNFFYSPFSISIALAMTYAGADTTTKTEMQ
NTLNYLLPDANLHAFFNFIDQELNKRESQAEEADAGTFELKLVNAIWGQK
NYTFLSDFLDTLAQNYGAGLRVLDFAASSEDARRVINDWVSEATKDKIKD
LIPSDGIDSTTRLVLTNAIYFNAAWAAPFEEENTQNGLFYLQNGSSVSVQ
MMHQSEGHGYYNGDDFQAVELAYAGNSLSMVIILPDEGKFGQVEDALSGQ
MLTGILASIKYNQINLSLPKFSFESEFALKDALSALGMPTAFSGQADFSK
MDGGYNLMIGDVFHKSFISVSEAGTEAAAATAVTMNLTSAPAEPVTLSID
RAFIFCIVDMATGTTLFTGRVLNPGA
>cbdbA1011 serine protease, DegP
MKKKLHLFSLFLCILIATAAFSAGGCDYLSQPINTDNSDNTPSTSTPLDE
NWKFPSPQQNLPELANYAMVVARVKPAVVAVDVEYITQDIFGRQTVAIAS
GSGFIIDPSGYIITNNHVVEGGSTVTVTLSDNRTFTASRVVTDSRTDLAV
IKVDTLGEELPFVYIGDSSALEVGEPVAAIGNALGLGITMKGGWISRLDA
QITVDQSVTLYGLIGTDAAINEGNSGGPLVNMAGEVIGITSAKIVEVGVE
GVGYAININSARTFIEELVNKGYITRPFMGVIGILTVDAAIQSYFKLGID
KGVLLRGIAENGPAEKAGLKANDVILSINGQAVLTDEELILAIHGKKVGD
KIEVSYFRDGVTSTVTLILAETPPPES
>cbdbA1387 peptidase, M48 family
MPEGELALPSEDTLNSPLGLDTERQQKARDYSRLQRRFAYIQTGIIAIAA
SFLIFSGLSSELTSHLGLPPVWSAGIYFLLLACVYEIFSLPFDYYTGYVL
GKRYGVLSQTRQTFFADAAKSFLITLVMGVLLVAAVYAVMGAWPDIWWLL
VWLGFLAVSMGLTFIAPIWLIPLFYPMKPLDDGELKTSLTELCRRIGVFV
RGIYIIELSAHGTAANAALMGLGRTRRIVLSDTMVDRYSIPEIEVIMSHE
IAHQQHNDMLRLFSLQAAVLFGVLAVGGAIFSYLSNAMEYSGLSDPAGLP
LLGGILAVLLIGISPVLSLFTRKLEKQADEFALNISQNPSAFRTAMTRLV
NQNLAEAEPSNWLERLTQDHPSYTQRIHLADEFEKRRSVDRG
>cbdbA207 glutaredoxin family protein
MEKIIGRNAGKIKLYALSTCGWCRLTRQLLAELGVAYEFEYVDLLTGAER
EKAVKELTALNPSSSFPTMVIGENRVIIGYKKAEIREALKA
>cbdbA1217 serine protease, DegP
MTTAQKWIGVLLSLVLIGVSAFNTILLLDQKDQLQTAQGQISSLQSQLSQ
AGTDINTLKSQLTAVNGHLATLDGQIGELLKLSTAQVDAIASVMASVVYI
EVDYYDRSTGERGTVSGSGTIMDSRGYILTNRHVVENATNVTVILPNKQV
YTAEDFWIDDFMDVAVVKIKANGLQAASFGDPSTLKMGDTVVALGYPLSI
SPTDGGMTVTAGIVSNLENWFFIDETPYFDVIQTDAAINPGNSGGPMINL
TGEIIGINSAGILDAQNMGFAINVATAEQIYESLVADGSVSHPYLGIDVD
DYYDDIPGFSGATESNGVEVLDVEHGSPADLAGLRDGDVIYQFDGKAVTS
FSDLLRILWRMESGETVVLQIKRGGVERTITIFLEDRPSSSYFF
>cbdbA830 conserved domain protein
MSWYWIASLIVIVVLIIIFVVNQVVSAHLKQAATGKEELYGKKALVKTPL
NPEGKVLYDGEIWSAHIENGSAEVGQEVVIVRLEGLKLYVKMERSE
>cbdbA1669 antioxidant, AhpC
MEEVARAMPRIGDIAPQFEALTTHGVLKLEDFKGQWLIIFSHPADFTPVC
TTEFIAFTEIYPELQKRGVELLGLSVDSNSSHIAWVRNVEEKTGIKIPFP
IIADLNKEVSSAYGMLHPGQSKTETVRCVFILDPGQKIRLIMYYPMNVGR
NMQEILRVIDALQTADEYKVALPANWYPGDKVVVPSPSTQEMAEERMGQG
YECVDWYLCKKQL
>cbdbA1530 ATPase, AAA family protein
MLEAALDGDDWQPMSKQLHLKRQKKNQTDIDQFFSEAHRCYATVALENYY
GDLLAWTVETYLKRAGWDIYRKLGYREDQPSYANIQISPETTLNLMTNGQ
ILISRNETRLVLTLDGNCRGAILQLEAERGNQALLDDFAVQVEALAKKEN
FYKGKCISFGGVLRFLKPGSQSWDSIILEESVKDDIYLNSVQFLKQQDRL
SRLGIPKKRGLLLAGEPGTGKTIVCKALMSRAKDITCITTDCYQLREAWY
VDELYEIARELSPSIVFIEDLDLIGKSRDEYGNEAATPLSALLAALDGLE
TNLGVVTIATTNFLDSLDNALIRRPSRFDRVITLKRPDLSQRQEIINRLC
RKIRLSPDARLYLARHSECYTPAQLQEVVFSLAIECQTKSNTQNNLLQIG
PADIDKALRHIYGIKNSHLGFIQATRRKENE
>cbdbA909 Hsp20
MTLERWQPGWSLRPWRPFREVLSPGLWNMLTNERDWLPATEMVELKDKYL
IKAEMPGINEEDIEVSVSDNVLSIKGEKKCDCEISEENYYFSERSYGSFS
RSMTLPNNTDPQNIAATLDNGILEITIPKSSEAKPKKVSVIKAAKPKKTD
LNTQSIKPKAQS
>cbdbA1677 putative peptidase
MWEQIQSNRTRSIMLVIGMGLILVALGYALGMAFTDNGLAGLVIALVLWG
IMNLIALTQGDSILLGMANAKEIKPSDHPRLYNVVEEMKIASGMDTMPKV
YIIDDPALNAFATGRDKNHISVAITSGLLQKLNRDELQGVIGHEMAHIKN
RDVSLMVWCSILLGTIVILAQYGSRMFIFGGGSRRSSSNEGSGGGAQAIL
MVAALLLIVLAPLFAQLIYFAISRKREYLADASSAQYTRYPEGLASALEK
LGASTEQLRSANQATAPMYIINPFRAKGKAAANLTSTHPPISERVRILRS
MNGASYHNYDEAFKQVKGGHVIPPTAIKLDHDETIREASDEGPLATEIGR
ARETSNALWNMNKYQTVDCDCGVRLRVPPGLKGQEIQCPHCGEIHQT
>cbdbA1684 AIR synthase domain protein
MSEMPEIGKISPDIFRELIYPRLGVASQDVLIGPRSGVDAAVINLGGKAV
SLTTDPVFIVPEYGWERAAWFAIHILLSDSVTSGLKPKYLTIDLNLPMSI
TKDQLSLVWQVIHDQCAQNGVSIVTGHTARYENCSYPFVGGATVIGEGEL
NQYVGPEFVKPGDKIIITKGPAIEACGIFAAMFPGFLAKKYGQDFSRKAQ
GIFYKMSVVEDALAAVSVGVRDNGVTAMHDATECGIWGGLYEIAEAAGLG
VTIEKDKIVIEDGVKEICSLFEIDPYASISEGTLLLTCRAHRAEAILSAM
AAKGTKASVAGEITPAGSGMKMIENGQGKPLVHPQVDPFWKAFYNALEKY
NELEGKK
>cbdbA1281 conserved hypothetical protein
MNIRLVWTVFTTLLEGVGIAFLGLWLLPQIDFQLPLWVILLAEAVLLVSS
VYFYHVGTVTLDQKPRTGSETIIGSSAVVVESVNPKGMIRLDGELWEAVT
SGVSIPRGGEVVVVGRDKMRLWVKPK
>cbdbA1372 DnaJ family protein
MANEKNLYETLGVPKTASADEIKKAYRKLARKYHPDLNPGDKASEETFKK
INQAYEILSNPENRTKYDKYGEQWQYGEQYEKARASQQQTQGSPFGGYDF
NFGSSEGGGFEDILSQMLGGRTGRRRSHPQPGQSIEQPIDISLEEAASGT
SRLLSFQMQKPCETCGGSGAKDKKVCPTCQGTGVNPGIERLEVKIPAGVN
TDSKIRLAGKGGYGQAGGQRGDLYLRIHVRPHEKFERKDDDLTVNVPVNL
TTAMLGGEIFIPSLKGKLALKIPAETQNGRTFRLKGQGIPHLGKDGSGDL
LAKVSIVLPEKLTDTERDLFEKLRQLRPDS
>cbdbA831 SPFH domain protein
MEETLNTLITVGVVLVVLLLILSMAIKVVTEYERGVIFRLGRLIGGKGPG
LFFLIPFVDRMVKVDLRVVTMDVPGQEVITRDNVTVRVNAVVYFRVVDPE
ASVVKVVDHFRATSQISQTTLRNVLGQSELDELLSQREKLNQILQQIIDE
ATAPWGIKVSIVEIKEVELPEAMKRSMAAQAEAERVRRAKIIHAEGEMQA
SQKLAQAGKVIAQEPVSLQLRYLQTMTEIASEHSNTIIFPVPIDLISMFM
DKGKGMTNPKTEKDTKE
>cbdbA1730 nifU protein, homolog
MLEKVEAVLDKIRPALEADGGNVELVDVVDGVVKVKLVGACAGCPMSTMT
LKNGIERILKREIPEIKEVVAA
>cbdbA706 hypothetical protein
MYTCSVCGKTLKLKRSLDRHMTQFHSLAAPATDPNPEPEAIPEAIPEAAE
LKIQAPPKRDYYCIDCGYSPIRKGTTACPKCGGAFDWGAIE
>cbdbA751 single-stranded nucleic acid binding R3H domain protein
MPELLTDDLNALLEVLPPHIRQPLTDPANRKNLIEIVMDLGRTPEARFPD
REIILSERDVTQEDIDYVSSRTGDFGDDNRAGIERTLHRISAIRNRKDKI
VGLTLRVGRAVFGTIKIIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLA
GDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVE
NHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNPTLS
DLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHP
DVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQPSEEKVKSAPESLTVF
RGKELPIMYLFGVNRSRMEEIAREMHLDIQISERLEQAQLMVTSRNYYRS
KPQRVRDAENMNIPIYVLKSHTPGQFKQLLATLSGRDVAYAVEKPPEIDV
AIHEAEEAVAQVKTSHIPVELSPQGAYIRRFQHIIAEKEHLSSHSLGREP
HRRVRISRG
>cbdbA1100 conserved domain protein
MPELLVGTVSDYFAHPGVAGIDLIDQLKVGDTIRIEGHTTDFEQEVDSIQ
INHANLTEAKAGDSVGVRVCDRVRQGDMVYKVT
>cbdbA1254 radical SAM domain protein
MHEALLYQKMPNGVIRCHTCQWNCRINPNHLGVCQVYQNINGSLFSLNYG
RTSSVAVDPIEKKPLYHFYPGSQVFSLGSWGCNFHCTGCQNWEIACPDTY
ERLFSSRTLLPEQAVSMAREHHCQGIAFTYNEPTVWFEYTLDCARLAKNN
GLYTVYVTNGYMTADALDTIGPYMDAFRVDIKGFKADTYKKLSKIQHWEK
ILATTERAKSQWGMHVEVVTNIIPTYNDDPEQLTGIARWIKTRLGELTPW
HVTRFYPCRDMLDVPPTPFETLEKAVEIGQGEGLKYVYMGNVPGHKSETT
CCPKCGQVLIRRHGYDTEICGLDNDHCRHCRSKLYIRLSSPTEGE
>cbdbA601 ccdA, cytochrome c-type biogenesis protein CcdA
MGRCKIGLEDVSYLLALAGGLAAFFSPCVLPMMPIYLASLAGADVLDAQP
NSITSFKALRHSIAFVAGFSLVFTSLGALSGLGGVIINPSDLWVRILSGG
MLVIFGTYMLLSLRFPSLSFEKHLASQQNLRTGGYIRSFLSGAVFTLAWT
PCISPMLGSILSITFGGESPLYGSALLAVFSLGMGIPFVLLGLLIQKTLP
LVHKISRYSAAIYGASGVILIFIGILILGNRIGFFSTLQI
>cbdbA1374 clpA, ATP-dependent Clp protease, ATP-binding subunit ClpC
MRQEKFTEQAQEALSASQMLVQEYQHSQWDVEHVLLALVRQEKGLVGEII
KELKLSSEEITKQLVEALKRSPKAVGGNVQIYPTPRIISLLQTANNEADR
LRDEFIGTEHLLVAIAGDTQGESARILKHFGIDQEKVYSALQKIRGGHRV
TDARAESKYRALAKYSRDLTELAKQGKIDPVIGRDQEIRRVMQILSRRTK
NNPVIVGEAGVGKTAIAEGVAQKIADNDVPESLRDRKVMALDMGALVAGS
KFRGEFEERLKAVMDEVRQSAGEIILFIDEIHTVVGAGAAEGAIDASNML
KPALSRGELQTIGATTLDDYRKYIEKDTALERRFQPVYVEEPTVEQTIEI
LKGIRPKYETHHKLKISDAALEAAVRLSSRYITERQLPDKAIDLIDEAAS
KLRLDSESAPPEVKKLENEFRQAGIEEEAASQLQDYEKAAELKAEKIRLE
EKFNTAREEWLKQEKIAEEVTDKQITELVSSMTGIPVSQMLEGEASKLLN
MEERIHERMVDQEEAVKAVAEAIRRSRAGLKDPRRPIGSFLFLGPTGVGK
TELARSLAWFLFDDETAMVRLDMSEYQEKHTVSRLVGAPPGYVGYDEGGQ
LTELVRRRPYRVILLDEIEKAHPDVYNSLLQLLDDGRLTDGQGRTVDFKN
TVIIMTSNAGIETIKRESALGFAVRTDDTKTRHDSYERMKDKVMTEVKKT
FRPEFINRVDEIIVFHELAEEQIRQIVDFMIKDVSKRLEERKLKLELTDE
AKGWLAKVGYDPAFGARPLRRAIERYVESPLAGKLLRNEFSENATILVDK
ADEALSFSQKAA
>cbdbA70 clpC, ATP-dependent Clp protease, ATP-binding subunit
MSSRFDKFSERARRVLTYAQEEAQSLNHNYIGTEHILLGLVREEEGVAAR
VLVNMDVNLAKVRSAVEFILGRGEHPATSETGLTSRAKKVIELGIDEARN
LGHNYIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVRTEVGRILNQGLN
KPKTSRTTPSRTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSR
RTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKHIISLDVASLV
AGTKYRGEFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAAN
ILKPSLARGEVQVIGATTLDDFRKYVERDAALERRFQPVLVEEPAIEDTL
SILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDLVDEA
ASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQ
IAEKIRRMEDEWQTEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETER
LLHMEDALHERIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTG
VGKTELARALAQFMFGSEDSLVRLDMSEFMEKFAVSRLVGAPPGYVGYDE
GGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGHLTDAKGRRVD
FRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGE
LKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVVKQMAEKGIGLE
VTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKV
IVDTAEDEIIVRLAEPAELSQATP
>cbdbA666 clpP, ATP-dependent Clp protease, proteolytic subunit ClpP
MISPENVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIA
QLLFLDREDPDKDISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVA
ASMATVLLCAGAKGKRYALPNATIHMHQAMGGAQGQASDIEIAAREIMRQ
QDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQAVEYGLIDEILQKPENK
>cbdbA1357 dnaJ, co-chaperone protein DnaJ
MVNKRDYYEVLGLERSASDEDIKKAFRKMAMKHHPDRNHEEGAADKFKEV
NEAYEVLSNPEKRAAYDRFGFSAGADSFGQGGFENFDFGGLGSIFETFFG
GATQGAKRGPRRGPDMSYDIKISLEEAATGVEKDITTERLEYCTECSGTG
AKAGTSPVKCTSCNGTGQVYQVQKSVFGRFTSVTPCPKCRGEGTIIGEPC
TKCRGTGKEYVKRTVQVKIPAGVADGNQIRLNGYGGVGDKGASAGDVYIN
VGIAEHADFKRDGDDVIYELEINFAQAALGTEVNVPGLNTEHKLKIPSGS
QNGKYFVLKGKGIPHLNRFGSGDEMVHLNVVTPEKLSRKQKQLFEELEKS
FAEDKKQAT
>cbdbA1358 dnaK, chaperone protein DnaK
MGKVVGIDLGTTNSEVAVMQGGEPVVIPSAEGSTLIPSVVAINKNGERIV
GRQAKNQAILNPENTVYSIKRFMGRKWGEPAGRELPVEADAKRKPYKVIQ
GNNNEVRVVMGDKDFSPPEVSAMILQKLKSDAEAYLGEKVTEAVITVPAY
FNDAQRQATKDAGAIAGLKVLRIINEPTAAALAYGLDKKKDETIAVYDLG
GGTFDISILELGEGTFQVKSTAGDTHLGGDDFDQKIIDWLIAEYKKDQGI
DLSKDKTALQRLKEAAEKAKIELSTVQQTEINLPFITADASGPKHLNIIL
TRSKLEQMVMDLVEKSLEPCRQALKDSGKTSAEINEVILVGGQTRMPLVQ
QKVKDFFGKEPNKGVNPDEVVAIGAAIQAGVLKGEVSDVLLLDVIPLTLG
IETLGGVSTALITRNTTIPTSKSQVFSTAADNQPSVEIHVLQGERPMAAD
NRTLGRFMLDGILPAPRGVPQIEVTFDIDANGMLSVKAKDKGTGREQKIT
ITASSGLSKEEVEKMTREAEAHAVEDTKRKEEIEARNVADNLAYNAEKTL
RDNKDKIPAELNTELESKIAAVRTALQGNDVEAIKKTTQELSTALQSVGS
AVYGKQQEGAPAQEEPSAEGKKADDEGTVEGEFREV
>cbdbA191 fdhE, formate dehydrogenase accessory protein
MNTNRLERINSEIERYRAAQPELETILALYQKVFDIQESASSQEEPAPLI
SDEDAIAKLAAGEYILKDIPFEPSAELFHQTGLKLGRAFTQTAGEKFPTP
ALLKLIENHPGGLSGFITAMLSDNLEYLAKFTQNTSFNPETLLFFVTNLV
SPFLTAQAKYYQPQVDLLGWDKNTCPFCGSSPRYSCLDKDNGARRLFCSL
CHTQWNYRRIKCAYCSNANAEKLRHFYSALFPYQRVDVCEKCKTYIKTTD
ERRLGRECLPEVEDAVSIHLDSIAQNEGYQPG
>cbdbA339 ftsH, ATP-dependent metalloprotease FtsH
MRYQMNSNWKRSTIIYVVMLVAIIAIFSFLVPNAQKPEEVPLSQIITLSQ
EHKIAEITVDSETIEVTTADGTKLSTVKEYIASIYDIEGLDLTDVKVNIQ
PAGGLDWGTMILTYLPFLIFGGLLIFIFTQARGANNQAVSFGRSKAKLFN
MDKPTITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIGP
PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKN
APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIV
VAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILKIHAKGKPLADT
VNLENLGKQTVGFSGADLANLLNEAAILAARKNRKVIETEDLEESIDRVI
AGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGADPVHKISIVARGMTL
GHTRQLPTEDRYLMTRSQFKGMMAGLLAGYVAEELTFKELSTGASDDLRR
ATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKIADMI
DDEVHGLIEEAHQKARKILTENKNRLKFIAEKLVEKETLEGVELESLFTG
ELPIAEST
>cbdbA1390 gcp, O-sialoglycoprotein endopeptidase
MKILGIESSCDETAASVVEDGVNILSNRISSQIDIHSRYGGVVPEVASRQ
HLLSILPVIKDALEEARTGLDEISAIAITNGPGLAGSLIVGVNAAKAIAA
ARRIPLVAVNHLHGHIYANWLFGKIPEFPCLCLTVSGGHTDLVLMSGHGQ
YQLLGRTRDDAAGEAFDKAARILGLSYPGGPAIDRASQDGQAVLDLPRSW
IPGSHDFSFSGLKTALLRLVESGEVCSVNDAAASFQKAVVDVLVTKTINC
AQEYNVKQILLAGGVAANNLLRKQLSEKSSLPVSIPPMGLCTDNAAVIAS
CGYFRFISGKQDGLDMDVLPALSVTS
>cbdbA1393 groEL, co-chaperonin GroEL
MAKQIIFGEKVRVSLKKGVDTLANTVRVTLGPKGHPVALERKWGAPTVID
DGVTIARDIELPDAFENMGAQLVKEAATRTSDAAGDGTTTSIVLAQAIIN
EAFKNIAAGAEPINLKRGIEKAVAALKAQLRKNSTPVKGKQQIVQVATIT
GKDPEIGNLIADVMDKVGKDGVITIEESRGLRYETSYVEGMQFDRGYISA
YFVTDPGRMESVMEDATILMTDRKIETVAELLPALEKILQISKNLVIVAE
NVEAEALATLVVNKLRGNLNILAVKAPGYGDRQKAMLEDMAILTGGHVIS
KEAGRKLDSVTEADLGHARRIVSNKDKTTIIDGEGSAEAIKDRIKQIKAQ
IEETESAFDREKLQERQAALVGGVAVIAVGAATETEMKERKARVEDALAA
TRAAIEEGILPGGGTGLLNALPCLDALKLEGDEATGVNIVRKALIEPVRW
IATNAGKDGNVIVDKVKNSPVGHGYNAENDVFGDMAEMGIIDPTMVVRSA
LENAASIANMVLITDSLVADIQEKAPAAPGPEAAGMY
>cbdbA1392 groES, chaperonin GroES
MAIRFEPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGLIVAVGPGRL
DKDGKRETMSIKVGEKVLFPKFGGVELKSGGVEYIIMPESQIMAKIVG
>cbdbA1359 grpE, co-chaperone protein GrpE
MTDRKMQDKEENEHPENTQAKTDGQLENLNAQLAEEKKRSEEYLDSLKRA
RAEFVNYKRYIEQERNIQGDMARGNAFMLVLPVLDDLERALTSVPANIAG
QPFIEGLDLIVRKFQAILDNQGVKAIPAAGEQFNSRLHEAVACEDGPEGI
ILHEARRGYTVGDRVLRTSLVVVGNGSQPCQQNSDMK
>cbdbA1397 hypB, hydrogenase accessory protein HypB
MKVKVLKNITDMNDQLATRNKHMFADKGILVINVMSSPGAGKTSLLLKTI
ELLGNDARVGVIEGDIASSVDAEKIAATGSQAIQINTDGGCHLDANMVAT
AADGLELDKLDIIFIENVGNLVCPAGFQLGEAKRVVLASVPEGDDKPTKY
PFMFRDTDVIVITKMDYLPLSDFNMESFRKTVLGLNPDVKIIELSVRNGQ
GLDEWIAWLKSNLLQRQ
>cbdbA1400 hypC, hydrogenase assembly chaperone HypC
MCLAVPAKIISLEDSVAEVDLNGTTYKASVMLTPEAKVGDYVLLHTGYAI
QVIDEKDALETLEIFKQMEML
>cbdbA1401 hypD, hydrogenase expression/formation protein HypD
MNFIEEFRNSQSGRTLLEYINKRSTKPARFMEFCGGHTVAIFRYGIRQLL
PPHIEMLSGPGCPVCVTSTADLDKVIALSRLTGVIICSFGDLLRVPSSRQ
SLLEVRAEGADVRIVYSTMDALEIARQNPAKKVIFVGIGFETTAPTIAAS
VIQARNQGLDNYYVMSLHKITPPVMRAILDAGETRLSGIICPGHVSSITG
SNAWEFIPKDYHLACAVSGFESLDILYCVKSLVDQVEDKTPRLDVSYSRA
VKPEGNLAALKIMDEVFDICPANWRGIGILPESGLCLKPEFAAFDAEKNF
EIKLSEPSRETPGCLCGEIIKGTRTPLECKLFSKVCTPENPVGPCMVSSE
GTCAAYYHYGGKLG
>cbdbA1402 hypE, hydrogenase expression/formation protein HypE
MDKTKILLAHGSGGRLTHDLISKYLVQSLSNPLLNKLDDAAVFKTGGNMA
FTTDSYVVSPIFFPGGNIGKLAVCGTVNDLSVMGAVPKYLSLSFIIEEGL
DITVLEEIIQSIAAAAKEAGVEIVTGDTKVVNIGKADKIFINTAGVGFIP
EELDISGSNAQPGDAVIVSGTMGDHGIAIMAQREGLNFKMAVESDCAPLN
GLIADMLKACPRIHVMRDPTRGGLATTLNEIAAQSQVGIELDEESIPVKP
AVGGACDALGLDPLYVANEGKLIAILPEEFAPKVLSAMKAHPYGVDSAVI
GRVTAKNPSRVSIRTPLGALRILDMQSGELLPRIC
>cbdbA1399 hypF, [NiFe] hydrogenase maturation protein HypF
MPAPKQTKRFAFALSGVVQGVGFRPFVYQLAAKHRLNGWVRNTSAGVEIE
AEGAGQALDAFSEELTSLNPPQSVIKTFKQTEIPLTGEEGFEIKPSQSLA
GRFQLVSPDIATCTECQKDIFAPRNRRYRYPFTNCTNCGPRFTIIEDIPY
DRPLTTMKNFKMCPDCQAEYDNPLNRRFHAQPNACPICGPRLWLADKTGT
ELSNTDTIAEAAKLLQDGQILAVRGLGGFLLAADATNPQAVATLRNRKRR
PSKPFAVMLANLEEARKYCSISKEEEHLLVSPAAPIVLCRWNKESPVCPE
TAPGQNYLGIMLSYTPLHHLLLKEINKPLVMTSGNLSEEPIAKDNDEALK
RLCNIADYFLLHNRPIYSRYDDSVVMYEAGEKRVLRRARGYAPYPVQTHF
KGKEVLAMGPQEKNTFCLLKDGYAFVSQHIGDMQNPETLDSFEETLAVYL
KLFRSKPEIIAADLHPGYIATALAEEWSDRLDIPLVKVQHHHAHIASCLA
EHGCDDEVIGVALDGTGYGLDGNIWGGEFFCGGIKQGFSRQAHLEYLPLP
GGEAAIKKPYRTAVSYVYTLLGEEGLGFFKDIDPEKLDIIKSQLNKKLNS
PLTSSTGRLFDAVAALCGICRVANYDSQPAIELEAEAKDTEFAQFYPFEL
DLDKGIYLIRLKGILEGVLSNIKSGKTAAYISVKFHNTVSQIVLDTCRKL
SAESGLTKVALSGGVFQNRRLFRQVIQQLETEGFKVLTHKEIPSNDGCIS
LGQAVIAANQGGL
>cbdbA1161 msrA, peptide methionine sulfoxide reductase MsrA
MNEIAVFGGGCFWCMEAVFSSLSGVTKVEPGYAGGNLPNPTYQQVCAGDT
GHAEVIRLEFDAALISYTALLDIFFQMHDPSTLNRQGEDLGSQYRSVIFY
TTPSQKAQAEKTIKTLDENGAFAKRIVTEVLPLTEFYPAEDYHHNYYAFN
SSQPYCRFVIQPKLAKLKEHLPKL
>cbdbA1163 msrB, peptide methionine sulfoxide reductase MsrB
MKYNELSPQEEAVIVRKGTEPAFSGEYVNLFKDGTYVCRRCDAPLYRAKD
KFHSGCGWPSFDEELSGAVKRQTDPDGRRTEILCAACGGHLGHVFEGESF
TPKDTRHCVNSLSIKLVPDNGGNK
>cbdbA1159 ppiB, probable peptidylprolyl isomerase
MKSTKALILATLFPVTLFAGSCGGDAVPEVTPMSWTTAPAMQIDPAKQYY
ATIETTLGSFKIELFASESPKTVNNFVFLAKQNYYNGVIFHRIIKEFMIQ
TGDQTGTGRGGPGYRFADELPVKHSYDPGIVAMANAGPNTNGSQFFVCTG
AQAKNLNYQPNYTQFGRVIEGMDVITKLASVSVVGNSYGEVSTPSNPPKI
IKITITES
>cbdbA72 radA, DNA repair protein RadA
MDKSRNVYICSNCGHESLKWLGRCPGCQEWNTLEETTIAAPLGRKNAPAR
VISPAAELSSLNASDTTRRSLSISEFNRVLGGGIVPGSLMLLGGEPGIGK
STLLLQVAASVAQSGGKVVYVSGEENPAQIKMRAQRLGISGEGLFLMAET
DLNAILAQLSVLCPSLVVIDSIQTVFLPELEAAPGAINQVRESALRLMQW
AKSSGASVFITAHVTKEGNIAGPRILEHIVDVVMYFEGESQSAYRLIRSV
KNRFGSTNEVGIFEMKSEGLVEVANPSQIFLSNRQANTVGSAVTAVLEGS
RPLLVEVQALTNTTSFGQPRRTANGVDFNRTIMIAAVLSKRLSMRLGTQD
IIVNATGGIRLDEPAADLAIALAIASSYRDIGVCPETIALGEIGLSGELR
TIPHLERRLSEASRLGFTRALVPAGANCQNININGIQIIAVSTVKEAIKL
ALTGVKTETEDVFE
>cbdbA250 rdhI, radical SAM domain protein
MNIYQITYEPNYRVLGLHFWGCNLFCRGCYKNYRTDDLSLPGSSVEQLKD
APRAKNPTRFLTLEEVLEKTEGLAPRDIFFMGKEASLDPELPLLAARLHA
RHKGFHTLLTNGVKLTDLSNIDEAVFGFKSASESVHREYTGLSNLGIMNN
FKKVYQNGKKLQAEIAFIPNLVEEEEIGALAKTISEIDRKILFRVTSYFA
VPGAPWPAASREQVEDAAAFARKYLDDVVTMASDSRDNSWKPEVIL
>cbdbA93 rdhI, radical SAM domain protein
MKVYHLIYEPSYKSAVFHHWTECNLDCKGCFCRVEKLDFGLFPDALERLK
DKAPETAPTDFLESPEEALKLLEGCELERAVFIGTEPALDPDLPALAKAL
HQKYGSYNVLLTNGVRLCDLSAIDEIIFSLKAVTNAIYQDYTGRSNEKTL
DNFKKVHASGKKLQAECLLIPGLIEADEVEKIAKFIATVDKDITLRIDGY
FPIPGCPWRGATPKEVTEASQRAEKHLAKVNYLSADLPRQGEKPLRLFG
>cbdbA1479 smpB, SsrA-binding protein
MHYARIVSNLRLGYDIIHMAEYVTLTTNRKAFHNYFLEEKYEAGIMLLGT
EIKSLRSGRVNMGDAYVKPQRGELWLVNAHISAYECSGHTSHEPMRERKL
LMHRKEIALLMSKVKEKGLTLIPVRIYLKNDIAKVELSLGRGKKLYDKRD
TVTKRDTERELEREVKYRNFRR
>cbdbA794 sufB, iron-regulated ABC transporter, subunit SufB-related
MSPKDLRPNLADTAGAAINKKPAVGDDILLERYTDNTEAHKYVNKPSELA
SEDKARILESGVILDDLKERSGTYIQMDNHPVHFSAQQDGIEIMSTSEAA
KKYDWLKDYWWKAVSVDADKYTAHVELNQADGYFIRALPGVKTEFPVQSC
MYMAKNQSIQNVHNIIIAEEGSELHIITGCTSAHRTETGLHLGVTEFYIK
KGAKVTFTMIHTWSPDIAVRPRTGAIVEENGVFLSNYVIMKTVKNLQSYP
VAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNAKHTRTELITRALTTG
GEIISRGYIEGKVPDCKGHLECRGLILGDKGIIYAIPELMGRVSGVDLSH
EAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNVDIEGLPPLLKEEMD
KAIKLGDQEGM
>cbdbA793 sufC, iron-regulated ABC transporter, atp-binding protein, SufC
MDSEILLEVKDLHVEVDGREILHGVDLVLPAGETHVIFGPNGSGKTTLLM
TLMGFPRYKITKGQLIFNGKDITHVPLDERARLGIGISFQRPPVVRGVKL
REMVRSSLRAKDDKGLINELAKKANMTDFLERDVNHGFSGGEIKRSELLQ
LLAQGPDMVLLDEPESGVDLENIALIGSLINELLEKKHPIRERKRGGLVI
THTGHILDYVNARTGYVLCHGRINCTGDPRDMLETIKHNGYQECVECPRK
I
>cbdbA664 tig, trigger factor
MKVTDKKIEGCQASITVEMDSTEVEEGLSKTYRRLVKKVEIPGFRKGKAP
RDVFEKYVSREKMLDELVDDIVPEACQKAIQDEEIKPFATPKVAMVTTDP
FVFSARIPLPPVVELGDYKTIRATKETVEIAEENIDTVVDQVLHQRATWE
TAERPVKMGDMLLMQVESTLNGEPYLNREDMQYSVREEAIYPAPGFGDCL
VDMVAGEPKEFSIVFPEDHARAELAGKTAAFKVTVREIKEEKLPELNDAF
AHELNPEFNTLSELRQRIRENMQDRQDDKAQAKFEDQIVEALIKMSKIDY
PEVMVEAELDQIIEQQLQRLQSNVKSPEEFRAMLSQMTPEDMQQRYRPLA
EQRVASSLVLGKLATTENLVPNDEEVDAEIEKLITDAGDKKEEEKALYNQ
SETRDRLIQLLTARKTMAFIDEIALQPALEAVEPKADEDEKTEEADK
>cbdbA645 trx, thioredoxin
MVMEITDQSFAAEVLKSDKPVLVDFWAPWCGPCRMVAPIIDKLSTKYAGK
FKFCKLNVDENKTTATQYRVMSIPTLLFFKGGQVADMVVGAVPESALSQK
IDQLIQK
>cbdbA516 trxB, thioredoxin reductase
MSTLLYDVIIIGGGPAGLTAALYTGRSKLKTLVIERAFVGGQITRSEKVD
NYPGFPEGITGFDLTQQMQIQAEKYGVEITSAEVNAIHKTKDHFEVVTET
GGLSGRCIIICGGTERNKLEVPGEEEFSGRGVSYCATCDAPFYNDKVVAV
VGGGNMAFYEALHLSEFAKKVYLIHRRQGFRADAVLMDKAKNKSNIELVL
DTVVTSINGQDSIQSLSLNNLKTLKTSTLPIDGLFVAVGLQPNTTYLKGV
VDMDKNGSILVNDQMETSVSGILSAGDIRSGSIRQVISAAGDGAVAALSA
KRYLDL