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# Helicobacter pylori 26695, 26695

>gid:14  HP0010  chaperone and heat shock protein (groEL)
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITK
DGVSVAKEIELSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFK
EGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS
ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLS
PYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIA
EDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKT
QIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALS
ATKAAVEEGIVIGGGAALIRAAQKVHLNLHDDEKVGYEIIMRAIKAPLAQ
IAINAGYDGGVVVNEVEKHEGHFGFNASNGKYVDMFKEGIIDPLKVERIA
LQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMGGMGGMM
>gid:15  HP0011  co-chaperone (groES)
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEG
CKCVKEGDVIAFGKYKGAEIVLDGTEYMVLELEDILGIVGSGSCCHTGNH
DHKHAKEHEACCHDHKKH
>gid:37  HP0033  ATP-dependent C1p protease (clpA)
MAKFNQDLNEVLNQALNLALDLNHALCTTEHVLLVILEHESGEKIIGTLE
RDDYDKLKQILKDYLLQYVPLKSDPAKMPARSFVLLRMLKRMYASCFESV
GVEELLILMLDHPDCYASKLMDSFGIARLYSNPALLDLDNHGIPNDINDN
EEAPKNTPLKKYAKNLSALAQDNALDPVIGREEEILRVIEILGRRKKNNP
LLIGEAGVGKTSIAEALALKIAQKEVPEFLQEYEVYSLDLALMVAGAKYR
GDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGTGSSNAGSLDAANILKPV
LTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSVIKVEEPSKEACYLILKK
IAPLYEEHHQVRYDESVFKACVDLTSDYMHDKFLPDKAIELLDEVGSRKK
ISPKKGKKIGVDDVKETLALKLKIPKMRLSSDKKALLRNLEKSLKNKIFA
QAEAISLVSNAIKIQHCGLSAKNKPVGSFLFVGPSGVGKTELAKELALNL
NLHFERFDMSEYKEAHSVAKLIGSPSGYVGFEQGGLLVNAIKKHPHCLLL
LDEIEKAHSNVYDLLLQVMDNATLSDNLGNQASFKHVILIMTSNVGSKDK
DTLGFFSAKNTKYDKAVKELLTPELRSRIDAIVPFNALSLEDFERIVSVE
LDKLKALALEQDITLKFHKEVVKFIAQKSYQTTLGAREIKKIIHNEIKTK
LSDILLLQSFKKPCKIACLLEKNQLVLKEIKRAQKVKENDF
>gid:51  HP0047  hydrogenase expression/formation protein (hypE)
MDSVTLACGNGGKETNALIERVFMPYLKEWIVAFDEDAPKFEASGEYCVS
TDSFVITPLIFNGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEI
SLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIKP
GISSYHLQQGQAIILSDTIANHGASLFAMRNEIKLKTNLESDCQLLYPLL
KPLFLSDLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETK
GICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEKAKNACVIGKV
FENPYPSVVLKNAWGFERILEVPEGELLPRIC
>gid:52  HP0048  transcriptional regulator (hypF)
MQHLNQTAWKFALCNDATLLNKITLFGVVQGVGMRPFIYTLAQKLELVGF
VRNTQAALEIILPAHKTESFLNALKKGLPPLALVEKIIISPYDKALHFNG
FRILESKNHPLNLLSQIPKDLGVCKDCLREIRDKNSPYFHYAFNSCAKCG
ARYSLLNALPYDRENSALKPFKLCDFCASIYQDPTNKRFHIQGISCKKCG
IALNYKRFKNDDALLECAKDIQKGKIIALKGLGGFALLCDGRNFQTIERL
RLLKNRPLKPFALMFKDLNTAKQHAFLNALECESLISTSAPILLARKKPD
IKLAPNIAKNSPFYGVILPYTPLHALLLDLLDFPIVFTSANFSSLPLASD
EAEIDALSFIFDFKLTHNRAIIHRIDDSIVQHVDNAIRPMRLARGFAPLY
LTLPKRSNGSPKKILALGAQQKGHFSLLDSGTSILLLSPFCGDLSVLENE
KHFKETLNFFLKTYDFKPTILACDKHQNYTTTQMAFDFNTPLLQVQHHHA
HFLASVLDALLQDPHLNHPFIGIVWDGSGAYENKIYGAECFVGDLERIEE
TARFEEFWLLGGQKAIKEPRRLVLEIALKHQLNKLLKRVQKHFKEDELEI
FQQMHDKKIQSIATNSIGRLFDIVAFSLDLTGTISFEAESGQVLENLALQ
SDEIAFYPFEIKNSVVCLKEFYQAFEKDLGVLEPERIAKKFFNSLVEIIT
ALIVPFKEHVVVCSGGVFCNQLLCEQLAKRLRGLKRQYFFHKHFPPNDSS
IPIGQALMAYFNPTIIKKG
>gid:70  HP0067  urease accessory protein (ureH)
MNTYAQESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIML
LAVSPGMMRGDAQDVQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIV
VGENAFLDFAPFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARN
ELFKFNRLHTKISILQDEKPIYYDNTILDPKTTDLNNMCMFDGYTHYLNL
VLVNCPIELSGVRECIEESEGVDGAVSETASSHLCVKALAKGSEPLLHLR
EKIARLVTQTTTQKV
>gid:71  HP0068  urease accessory protein (ureG)
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKN
SVMPRERIIGVETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESG
GDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLA
PYVGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
>gid:72  HP0069  urease accessory protein (ureF)
MDKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTH
SFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESALQQD
LKKILGVEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGEFFNAY
AQKTKDPTHATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLS
QNDGQKILLSLQSPFNQLIEKTLELDESHLCTASVQNDIKAMQHESLYSR
LYMS
>gid:73  HP0070  urease accessory protein (ureE)
MIIERLVGNLRDLNPLDFSVDHVDLEWFETRKKIARFKTRQGKDIAIRLK
DAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGN
RHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSM
PHSEPNFKVSLASDFKVVVK
>gid:74  HP0071  urease accessory protein (ureI)
MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIICNIVVITY
SALHPTAPVEGAEDIAQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLD
WRPYSWYSLFVAINTIPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWG
VLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV
>gid:114  HP0109  chaperone and heat shock protein 70 (dnaK)
MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILV
GESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGAC
AIEISGKVYTPQEISAKILMKLKEDAESYLGESVTEAVITVPAYFNDSQR
KATKEAGTIAGLNVLRIINEPTSAALAYGLDKKESEKIMVYDLGGGTFDV
TVLETGDNVVEVLATGGDAFLGGDDFDNRVIDFLASEFKSETGIEIKNDV
MALQRLKEAAENAKKELSSAMETEINLPFITADATGPKHLVKKLTRAKFE
SLTEDLMKETISKIESVIKDAGLTKNEISEVVMVGGSTRIPKVQERVKAF
INKDLNKSVNPDEVVAVGASIQGGVLKGDVKDVLLLDVTPLSLGIETLGG
VMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGK
FDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG
LSDSEIEKMVKDAELHKEEDAKKKEVIEARNHADSLAHQTQKSLDEHKTN
LNENDANEIQNAINALKDCVKNDNATKAELEDKTKLLAQAAQKLGEAMAN
KNNAEQPKKKDDDVIDAEVE
>gid:115  HP0110  co-chaperone and heat shock protein (grpE)
MKDEHNQEHDHLSQKEPEFCEKACKEQQYEEKQEAGEKEGEIKEDFELKY
KEMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGA
HKSAAEEDKESALTKGLELTMEKLHEVLARHGIEGIECLEEFDPHFHNAI
MQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND
>gid:141  HP0136  bacterioferritin comigratory protein (bcp)
MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEA
KDFSALFSEFEKKNAVVVGISPDNAQSHQKFISQCSLNVILLCDEDKKAA
NLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYNVKAKGHAQKVLE
SL
>gid:148  HP0144  cytochrome c oxidase, heme b and copper-binding subunit, membrane-bound (fixN)
MQENVPLSYDYSISKLFLYAMVGFGIVGMLIGIVLAFELSFPNLNYIAGE
YGIFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVG
LLHFWLWIILLILGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNM
FGSMSVRRENTIYVSLWYYIATYVGIAVMYIFNNLSVPTYFVADMGSVWH
SISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYK
LTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAI
NMLLTMRGQWHQLKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHF
TDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGV
GGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMSR
>gid:153  HP0149  H. pylori predicted coding region HP0149
MRILWLVIAFVCCLGADDYVFNNFKGRLVEKSVAFVEGVSKELYLKTGVR
FVIDMTDFEKNPIALATKKERQNYQEGFLKQLKPPFVVFFFYHDAQKIEL
VANPKDLLDTDKIFFEKIAPLLPTNPKEYTPQRISAMLINGYSVAVDALA
QKYRVNITQNFNAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS
>gid:173  HP0169  collagenase (prtC)
MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFK
EGIDYAHALNKKVYATINGFPFNSQLKLLEEHIDKMAELEPDAFIIAAPG
VVKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDA
IEIKKALPNLELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRF
DYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSGHIAEILSSNAISA
LKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFT
DGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNTA
YEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGN
VNLVRLPAPLPAFSFLRTQVRV
>gid:179  HP0175  cell binding factor 2
MKKNILNLALVGALSTSFLMAKPAHNANNATHNTKKTTDSSAGVLATVDG
RPITKSDFDMIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKTEKL
DSTPEFKAMMEAVKKQALVEFWAKKQAEEVKKVQIPEKEMQDFYNANKDQ
LFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDP
NSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIY
LISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK
>gid:213  HP0210  chaperone and heat shock protein C62.5 (htpG)
MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELVSNASDALDKLNYLML
TDEKLKGLNTTPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSG
TKNFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVNSDQAYA
WVSDGKGKFEISECVKDEQGTEITLFLKDEDSHFASRWEIDSVVKKYSEH
IPFPIFLTYTDTKHEGEGDNQKEIKEEKCEQINQASALWKMNKSELKDKD
YKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSTAPFDMFRVDYKS
GVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKIL
ANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKL
LELLRFYSKDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPLLEK
YAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFKDASHSESLKELGLEEIHD
EVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANWMR
QMGQSVPESKKTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEK
GALKDAKSFNERLNSVLLKAL
>gid:226  HP0223  ATP-dependent protease (sms)
MILKKSGILAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQAQKE
VLNTLKKPIPQAQKSVSIAAIEHEEVIKFSSTQSELDIVLGGGIAKGGLY
LVGGSPGVGKSTLLLKVASGLAKNQQKVLYVSGEESLSQIKMRAIRLDCI
EKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSPEISSAPGSISQV
REITFELMRLAKTRDIAIFIIGHITKEGSIAGPRVLEHMVDSVLYFEGDP
SRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGS
AITITLEGSRALILEIQALVSECSFGSPKRLANGFDTNRLNMLIALLEKK
LEIPLNRHDVFINVSGGIKISEPACDLAVIASILSSFKNRKIDNKTAFLG
EVSLNGRILEAPNLNARLKEMENYGFLKAILPKKPSQKTSIKCYEANAVG
KIVEWM
>gid:227  HP0224  peptide methionine sulfoxide reductase (msrA)
MKVLSYLKNFYLFLAIGAIMQASENMGSQHQKTDERVIYLAGGCFWGLEA
YMERIYGVIDASSGYANGKTSSTNYEKLHESDHAESVKVIYDPKKISLDK
LLRYYFKVVDPVSVNKQGNDVGRQYRTGIYYVNSADKEVIDHALKALQKE
VKGKIAIEVEPLKNYVRAEEYHQDYLKKHPSGYCHIDLKKADEVIVDDDK
YTKPSDEVLKKKLTKLQYEVTQNKHTEKPFENEYYNKEEEGIYVDITTGE
PLFSSADKYDSGCGWPSFSKPINKDVVKYEDDESLNRKRIEVLSRIGKAH
LGHVFNDGPKELGGLRYCINSAALRFIPLKDMEKEGYGEFIPYIKKGELK
KYINDKKSH
>gid:235  HP0231  H. pylori predicted coding region HP0231
MILRASVLSALLLVGLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRIL
EIKPLKSSQDLKMVVIEDPDTKYNIPLVVSKDGNLIIGLSNIFFSNKSDD
VQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAANKDKI
LYIVSDPMCPHCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEE
MAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTKVENTTKKIFE
SGVIKGVPFLYHYKA
>gid:252  HP0248  conserved hypothetical protein
MPIDLNEHLKKKNSQRETPTPNTPNNGGRFIPPSNSFNSKKLSVLIVIVL
LGVIAFLAKPFEVISSGEIGIKITAGKYEPTPLQPGIHFFVPIIQDILIV
DTRIRNINFSRTEDMGVAGKNQGIFRNDAINVMDSRGLTVSIELTVQYRL
NPQTTPQTIATYGLSWEQKIINPVVRDVVRSVVGRYPAEDLPIKRNEIAA
LINSGINKEVSKLPNTPVELSSIQLREIVLPAKIKEQIEKVQIARQESER
VKYEVERSKQEAQKQAALAKGEADANRIKAQGVADAIVIEAKAKSQANLS
ISQSLSDKLLRLRQIEVQGQFNEALKTNNNAQIMLTPGGAVPNIWIDTKS
KVKSSIAETKEP
>gid:269  HP0264  ATP-dependent protease binding subunit (clpB)
MNLFEKMTDQLHETLDSALALALHHKNAEVTPMHMLFAMLNNSQGILIQA
LQKMPVDIQALRLSVQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLM
AKRGDSFIATDVYLLANMGLFESVLKPYLDAKELQKTLESLRKGRTIQDK
NDDSNLESLEKFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNP
ILLGEPGVGKTAVVEGLAQRIMNKEVPKTLLNKRVIALDLSLLVAGAKYR
GEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPAL
ARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGL
KETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM
QMESEPAKLSSVKRSIQRLEMEKQALEMEKKESNAKRMQEILKELSDLKE
EKIQLEAQFENEKEVFKEISRLKMEMESLKKEAERFKRNGDYQQAGEIEY
SKIPENKKKEEELQRKWEAMQQNGALLQNALTENNIAEIVSQWTHIPVQK
MLQSEKNRVLNIESELQKRVVGQEKAIKAIAKAIKRNKAGLSDSNKPIGS
FLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYLEKHAMSRLIGAA
PGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLT
DSKGVRVDFKNTILILTSNVASGALLEENLSEAEKQKAIKESLRQFFKPE
FLNRLDEIISFNALDSHAVINIVGILFENIQKKALERGINITLDEEAKEL
IAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKVKENDSVAFVVENNE
IVPKIK
>gid:270  HP0265  cytochrome c biogenesis protein (ccdA)
MMFDNTLVNLFDTAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLED
IKDGKAKRVSVFLKSLMFVVGFSLVFLGVGMSMAKLIHSFSFSWVNYIAG
GIVILFGLHFLGVFRFAFLYKTQSVGLASKSNSMQRFYPFLLGMSFALGW
TPCIGPIFTSIVIMSASKDAYGLILMVVFVMGLAIPFLLVALMLERALLF
LKSLKKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQK
>gid:291  HP0286  cell division protein (ftsH)
MPFSKNLENLTAPFKRIKNRSLVLALGFLILTFCLLLFLILSDVSRLISG
KDFFYVIQSHPKQTLIEDENYFYANKGLYKTNKEAFLRVYKIPESMPIER
RENLSKVSKIFLALLFFISSMLFGIFWRLPKRLDTKMSLESAHKNELENA
FQRYDALGVRFEDIAGVDEVKEELLEVIDYLKNPKKYQDLGIFLPKGVLL
IGPPGVGKTMIAKALASEARVPFFYESGSAFSQIYVGAGAKKVHELFMHA
KRHAPSIIFIDEIDALGKARGGHRSDEREATLNQLLTEMDGFLQNDEVVV
IGATNQMEVMDEALLRSKRFDRRIFISLPDLLERQSILEKLLENKKHALN
YLKIAKICVGFSGAMLATLINESALNALKHQRTEIAESDILEVKDKIAYG
KKKPQTLDENQKELVALYQSAKALSAYWLEIEFDKAPILGEFIAFNENKI
HSESEIKNYIKVYLSGTIILELLYKERYSLSKQDLQKAKFLNEFMASELL
LAPTKESLSVLYEEQLEFLKPQIAACKRLSVLLLEQEYLEHSNLYDLLNG
>gid:371  HP0363  L-isoaspartyl-protein carboxyl methyltransferase (pcm)
MNSIKNHLMCEEINKRFNLHPKVREAMESIEREVFVPAPFKHFAYTLNAL
SMQAQQYISSPLTVAKMTQYLEIDHVDSVLEIGCGSGYQAAVLSQIFRRV
FSIERIESLYIEARLRLKTLGLDNVHVKFADGNKGWEQYAPYDRILFSAC
AKNIPQALIDQLEEGGILVAPIQENNEQVIKRFVKQNNALRVQKVLEKCL
FVPVVDGVQ
>gid:386  HP0377  thiol:disulfide interchange protein (dsbC), putative
MFSLSYVSKKFLSVLLLISLFLSACKSNNKDKLDENLLSSGSQSSKELND
ERDNIDKKSYAGLEDVFSDNKSISPNDKYMLLVFGRNGCSYCERFKKDLK
NVKELRDYIKEHFSAYYVNISYSKEHDFKVGDKNNEKEIKMSTEELAQIY
AVQSTPTIVLSDKTGKTIYELPGYMPSTQFLAVLEFIGDGKYQDTKDDED
LTKKLKAYIKYKTNLSKSKSN
>gid:387  HP0378  cytochrome c biogenesis protein (ycf5)
MKNLKSLLSFLLASFWVAIPLIALYALACAIATFIENDYGTSASKAIVYN
TPWFNFLHAYLLVVLIGTFINSKALERKRYASLFFHSSLIFIILGAAITR
FFGVEGLMHVRENSAQSSFESADTYLNITLNDTTKLSLKTPLTFYHSKRL
RPIHATLNHKPLILEPLEIYKQNAIKKDDATILVLKATYNGVSRKFNLIK
TNRNEGIEESEVFKDDKLSLSFGSAYIELPFQIKLKRFELERYAGSMSPS
SYASEVEVLKLDNTLIKPYRIFMNHVLDYEGYRFFQSSYDMDEKGTILSV
NKDPGKIPTYLGYAMLILGALWLLLDKNGRFLKLSRFLKSQQVASFLLAL
ILISPFTSSFANEAPIDMHGGKSAKIERQSVENSAQKENSKSAILERLKR
LREYSKDHLKAFQRLQVQDFDGRIKPLDTISIEYIHKILKKDDFQGLNAM
QVLLGIMFFPNDWRSIKMIYTSTKALRKLIGTPLDESRIAFRDAFDSRGY
KLKNLVEEVNQKSPNARNELDKDVLKVDERINLVYTLFSAQFLRIFPSDK
TTAWLSPIEAISSPNKEISSVATEFLKNIFSGFDDALKTNQWDKVEKTLK
DLSIYQKEHAKNLYLSSSKVDSEIFLNHTNFFNRLTLPYILLGLLLFIVV
ISSLVKNTIPNIWLTKILYFAILLCALAHSMGLVLRWYVSGHSPWSNAYE
SMLYIAWASVIAGFILRSKLALSASSFLAGIALFVAHLGFMDPQIGHLVP
VLKSYWLNIHVSVITASYSFLGLCFVLGILSLVLFILRKQGRFNLDKTIL
SISAINEMSMILGLFMLTAGNFLGGVWANESWGRYWGWDPKETWALISIC
VYALILHLRFLGSHNWPFILASSSVLGFYSVLMTYFGVNYYLSGLHSYAA
GDPLPIPTFLYFLVAIPFALVILAYFKRHLSLPKLA
>gid:391  HP0382  zinc-metallo protease (YJR117W)
MLDIWIDMIICIFYLLFFTTPYIVGDILQLKFIRQKLCEKPVLLPQKDYE
EAGNYAIRKMQLSIISQILDGIIFAGWVFFGLTHLEDLTHYLNLPETLGY
LVFALLFLAIQSVLALPISYYTTMHLDKEFGFSKVSLSLFFKDFFKGLSL
TLSVGLLLIYTLIMIIEHVEHWEISSFFVVFVFMILANLFYPKIAQLFNQ
FTPLNNRDLESQIEGMMDKVGFKSEGIFVMDASKRDGRLNAYFGGLGKNK
RVVLFDTLISKVGTEGLLAILGHELGHFKNKDLLKSLGIMGGLLALVFAL
IAHLPPLVFEGFNVSQTPASLIAILLLFLPVFSFYAMPLIGFFSRKNEYN
ADKFGASLSSKEVLAKALVSIVSENKAFPYSHPFYVFLHFTHPPLLERLK
ALDYEIE
>gid:393  HP0384  H. pylori predicted coding region HP0384
MQKNILKMTLLLVFLFLRNAVGLEDKKATTQPESVQNTPKDLPPIQLRLN
QVHEELIEMLENMGKGTQYEFPKIKEILEQSEEEWLKVAHEECVALVMLI
SPKASIENSPIYKNCYEAYVKQRIHDLYDFYIESKKVKRKIKKAHKQETA
INQSQPLTKESPKNENKKNLVKPNLKDASIPKGYYLQIGAXLNAPSKDFL
QTLKTFPYQIKKKDSLTHYFIGPYKTKEEALKQLENAIKSFKNKPVLVEK
>gid:399  HP0390  adhesin-thiol peroxidase (tagD)
MQKVTFKEETYQLEGKALKVGDKAPDVKLVNGDLQEVNLLKQGVRFQVVS
ALPSLTGSVCLLQAKHFNEQTGKLPSVSFSVISMDLPFSQGQICGAEGIK
DLRILSDFRYKAFGENYGVLLGKGSLQGLLARSVFVLDDKGVVIYKEIVQ
NILEEPNYEALLKVLK
>gid:529  HP0515  heat shock protein (hslV)
MFEATTILGYRGELNHKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQV
LSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLE
AMMIVLNFDHIFILSGMGDVLEAEDNKIAAIGSGGNYALSAARALDHFAH
LEPRKLVEESLKIAGDLCIYTNTNIKILEL
>gid:530  HP0516  heat shock protein (hslU) ORF1
MSKLNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEI
TPKNILMIGSTGVGKTEIARRIAKIMELPFVKVEASKYTEVGFVGRDVES
MVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPNGVSEEKK
QEYANSLLKMQQRIAQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENL
IKVFHKEQDKVKKTLSVKEAKEALKAEISDTLLDSEAIKMEGLKRAESSG
VIFIDEIDKIAVSSKEGSRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTE
HILFIAAGAFHLSKPSDLIPELQGRFPLRVELENLTEEIMYMILTQTKTS
IIKQYQALLKVEGVEIAFEDDAIKELAKLSYNANQKSEDIGARRLHTTIE
KVLEDISFEAEDYSGQNVTITKELVQSKLEDLVADENLVKYIL
>gid:607  HP0595  H. pylori predicted coding region HP0595
MDKETRFYNLFSLAILGILIFPVGLANFYFGYVLKDSPCIFCWAQRINMI
LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFA
LAILGLHTQFWALFVFFSVVVLLAVLLFFAPNAQPFKDHSLNALQKIAFY
VFFMVVGSNAVQAFISTGPFPYIGQSDPVRFSWNLKESVWSMENWDHLKF
PRSVLGRRDVGEPLKLSALPKDNDYERSPLEITKTLKIGKKEELFLKLNG
AITDLSFNEDKAILTTENQGLYLVSNDLKTIHSHMVLDSYYSATVGSFVG
ADFNEDENIVIMGNNKTSVEITPNKNANMLKNFPYFLEGVNSFDEVERSR
LKTSRAKNYYVSVARRGAKFTYLISAPNKRYKDLIIISMRNSDKQVHGEF
LLELGNAKLKEKRGLGELVISTLALKDNKLYAFSKEFNTLLVIDPTKEEI
LEVYGLPKEIKNISAGGFRNDELVLVSYENNKNILYTLNF
>gid:670  HP0659  H. pylori predicted coding region HP0659
MRKIFSYVLKALLFIGIVYAEPESKVEALEGRKQESSLDKKIRQELKNKD
LKNKELKNKKEEKKNTEEKKETKAKRKPRAEVHHGDTKNPTQKITPPKIK
ENAKGVQNQGVQSNAPKLEEKDTTSQTLEKKGASPSSQFNSIFGNPNDAA
NNTLEDKVVGGISLLVNGSPITLYQIQEEQEKSKVSKAQARDRLIAERIK
NQEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKLYRDQ
LKEHLEMQELLRNILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRYT
STNQEDLERAMADPNLEIPGVSKANEKIEMKTLNPQIAQVFISHEQGSFT
PVMNGGGGQFITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHF
EKLRVKSRIVMIRE
>gid:760  HP0753  flagellar protein (fliS)
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKK
IYYINRVTDIFTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVENDA
SKIDLVLNVARGLLEAWREIHSDELA
>gid:769  HP0762  H. pylori predicted coding region HP0762
MRIKAYFLRFIALVLIVLLGFSACKNSQKSQDSQNNTPQQDSPKTYTAMD
LNNQEYTITGDLDSLNISPDSNTPTLLVLSALDNSLKDYAPSFNILKKTF
KDRLRVLILLNKPYSSDAIKDFSAHFQADLMILNPKDTALFDHLKYDALN
HSFNMLLYHKHQLIKMYQGIVPIEMLQFDISNLKD
>gid:799  HP0792  sigma-54 interacting protein
MINTMFCATMQRGVAEIVAVEATFTRALPAFVISGLANSSIQEAKQRVQS
ALQNNDFTFPPLKITINLSPSDLPKSGSHFDLPIALLIALQKQELAFKEW
FAFGELGLDGKIKPNPNIFPMLLDIAIKHPHAKIIAPKANEELFSLIPNL
QCFFVGHFKEALEILQNPETKADTHTKKLPFKTIELNDKEYYFSDAYALD
FKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINRMRYILPPLSL
NEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGE
IALAHNGMLFFDELPHFKKDILEALREPLENNKLVVSRVHSKIEYETSFL
FVGAQNPCLCGNLLSATKACRCQDREITQYKNRLSEPFLDRIDLFVQMEE
GNYKDTPSHSWTSKEMHELVLLAFKQQKLRKQSVFNGKLNEEQIERFCPL
NAEAKKLLEQAVERFNLSMRSINKVKKVARTIADLNACEDIEKSHMLKAL
SFRKIS
>gid:801  HP0794  ATP-dependent clp protease proteolytic component (clpP)
MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLL
FLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASM
GAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGL
MNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
>gid:802  HP0795  trigger factor (tig)
MNLEVKKIDTANARLSAKLSIENLEKRYDKIAQKIAQKVKIDGFRRGKVP
LSLVKTRYQAQIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFEK
KDTHFEIEADIGLKPTIVLDKIKECVPSVGVEVPNEEKIDERLKQLAKDY
AKFVDTNTQRKAQNDDKLTIDFEGFIDNAPFEGGKAENFNLILGSKQMLE
DFEKALLGMQAGEEKEFPLTFPSKYHAEHLAGKEAFFKVKLHQIQAREML
EINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYNEELKEKLIEN
LDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES
FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLI
EQYRKNNMLAAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKIQA
G
>gid:831  HP0824  thioredoxin (trxA)
MSHYIELTEENFESTIKKGVALVDFWAPWCGPCKMLSPVIDELASEYEGK
AKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQ
LNKLLG
>gid:832  HP0825  thioredoxin reductase (trxB)
MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYP
GVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKT
FEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLG
GGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPY
VVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQED
NSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATA
ALSVISYLEHH
>gid:907  HP0898  hydrogenase expression/formation protein (hypD)
MSVDHLISPFRDKRTLLALSNAIKKLAFKLEKKLVIMEVCGGHTHSIMKY
GLLDLMPNNLEFVHGPGCPVCVMPRARLDEAYELATIKDSIVLSLGDMMR
VPGSYGSLIQAREKGLDARFLYSPMQALEIAKENPTKKVIYIAIGFETTT
PMSASVLWSAKKEKINNLFFHINHILVPPSVSAILKDPACQINALLAPSH
VSVISGAQIYAPLVDRFKIPIIVSGFEPVDILESVLMLIKQALNKEAKLE
IQYKRAVSFEGNVKAQELVNACMEVRENFEWRGLGNIKRSALKLKEAFAS
YDAEEVFKEYLSHKTSKENKACKCGEILKGIAKPLDCSLFATTCTPQNPI
GSCMVSSEGACAAYYRYKRV
>gid:908  HP0899  hydrogenase expression/formation protein (hypC)
MCLAIPSKVIAIKDNVVLLETLGVQREASLDLMGESVKVGDYVLLHIGYV
MSKIDEKEALESIELYQEMIARMNETQ
>gid:909  HP0900  hydrogenase expression/formation protein (hypB)
MSEQRQESLQNNPNLSKKDVKIVEKILSKNDIKAAEMKERYLKEGLYVLN
FMSSPGSGKTTMLENLADFKDFKFCVVEGDLQTNRDADRLRKKGVSAHQI
TTGEACHLEASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCPSSYNLGA
AMNIVLLSVPEGDDKVLKYPTMFMCADAVIISKADMVEVFNFRVSQVKED
MQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF
>gid:934  HP0927  heat shock protein (htpX)
MRARCSKKSSMRKEKIMTNFEKIIAQNRIKTNAVLATYCVIFAFIGLLVD
VIRINANDLGIALFKLMTFQIFPTITMIMFLVAFVVIVVCIQNFSSIMLS
GDGYKLIDTSKVLSSKENQIHRLLLELLEEANLHFEPKLYIINAPYMNAF
ASGWNESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGI
LSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYL
SRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAA
YLFNAEMFSTHPSIKNRIQSLRKRVI
>gid:941  HP0934  conserved hypothetical protein
MKLPVVESFFSLQGEGKRIGKPSLFLRLGGCNLSCKGFNCKTLLNDEILT
GCDSLYAVHPKFKTSWDYYNEPKPLIERLEDLAPNYKDFDFILTGGEPSL
YFNNPILISVLEHFYRQKIPLCVESNGSIFFEFSPILKELHFTLSVKLSF
SLEEESKRIHLKALQNILNNAKSAHFKFVLESQNAAQSIIEIQSLLKQLS
LKNNEIFLMPLGTNNNELDKNLKTLAPLAIKHGFRLSDRLHIRLWDNQKG
F
>gid:988  HP0977  conserved hypothetical secreted protein
MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIK
ISQEELAQEYRRLKDAYAESIPDFKELTKDQIKAMHLEKSALDSLINQAL
LRNLALDLGLGATKQEVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPK
HFEESVERLLILQKISTLFPKTTTPLEQSSLSLWAKLQDKLDILILNPSD
VKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFDASLEKPDLKELEEYY
HKNKVSYLDKEGKLQDFKSVQEQVKHDLSMQKANEKALRSYIALKKANAQ
NYTTQDFEENNSPYTAEITQKLTALKPLEILKPEPFKDGFIVVQLISQIK
DELQNFNEAKSALKTRLTQEKTLMALQTLAKEKLKDFKGKSVGYVSPNFG
GTISELNQEESAKFINALFNRQEKKGFIAINNKVVLYQITEQNFNHSFSA
EESQYMQRLVNNTKTDFFDKALIEELKKRYKIVKYIQ
>gid:1031  HP1019  serine protease (htrA)
MSPLKTIRIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGGVFNDPFFQQF
FGDLGGMIPKERMERALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGSN
KEYSATLVGTDSESDLAVIRITKDNLPTIKFSDSNDISVGDLVFAIGNPF
GVGESVTQGIVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGL
VGINTAIISKTGGNHGIGFAIPSNMVKDTVTQLIKTGKIERGYLGVGLQD
LSGDLQNSYDNKEGAVVISVEKDSPAKKAGILVWDLITEVNGKKVKNTNE
LRNLIGSMLPNQRVTLKVIRDKKERAFTLTLAERKNPNKKETISAQNGAQ
GQLNGLQVEDLTQETKRSMRLSDDVQGVLVSQVNENSPAEQAGFRQGNII
TKIEEVEVKSVADFNHALEKYKGKPKRFLVLDLNQGYRIILVK
>gid:1036  HP1024  co-chaperone-curved DNA binding protein A (CbpA)
MSKSLYQTLNVSENASQDEIKKSYRRLARQYHPDLNKTKEAEEKFKEINA
AYEILSDEEKRRQYDQFGDNMFGGQNFSDFARSRGPSEDLDDILSSIFGK
GGFSQRFSQNSQGFSGFNFSNFAPENLDITAALNVSVLDTLLGNKKQVSI
NNETFSLKIPIGVEEGEKIRVRNKGKTGRTTRGDLLLEIHIEEDEMYRRE
KDDITQIFDLPLKTALFGGKIEIATWHKTLTLTIPPNTKAMQKFRIKEKG
IKNRKTSHVGDLYLQARLILPKTETLSNELKALLEKEL
>gid:1063  HP1051  H. pylori predicted coding region HP1051
MYQNNFLCASYTSKSKTSEALVEVFSQLFKDFKNPTLPAIKGVYYAKGPG
SFTSLKLTHVFLHTLALIHDFELYSTIGFDFNDNTPILAYANKYFVSKEM
ESLSDFKDLKIAPKDFMLPPFLEKDKFTQLNTPFYILPPI
>gid:1082  HP1069  cell division protein (ftsH)
MKPTNEPKKPFFQSPIILAVLGGILLIFFLRSFNSDGSFSDNFLASSTKN
VSYHEIKQLISNNEVENVSIGQTLIKASHKEGNNRVIYIAKRVPDLTLVP
LLDEKKINYSGFSESNFFTDMLGWLMPILVILGLWMFMANRMQKNMGGGI
FGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGA
KIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASR
VRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAE
MDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEI
LKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEV
RQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSAR
VNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVF
LEEISTGASNDLERATDIIKGMVSYYGMSSVSGLMVLEKQRNAFLGGGYG
SSREFSEKTAEEMDLFIKNLLEERYKHVKQTLSDYREAIEIMVKELFDKE
VITGERVREIISEYEVANNLESRLIPLEEQAS
>gid:1136  HP1123  peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (slyD)
MQNHDLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQIIAGL
EKAVLKAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSV
FGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRFKVLGFREVSEE
EILASHHGGGTGCCGGHGGHGGKKGGGCGCSCSHG
>gid:1178  HP1164  thioredoxin reductase (trxB)
MNQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYK
AGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHHITPSYKTD
IESVKKEGEYFKITTTSNTTYHAKFVVVAIGKMGQPNRPTAYKIPVALSK
QVVFSINDCKENEKTLVIGGGNSAVEYAIALCKTTPTTLNYRKKEFSRIN
EDNAKNLQEVLNNNTLKSKLGVDIESLEEDNTQIKVNFTDNTSESFDRLL
YAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKS
GASIATALNHGYDVAIEIAKRLHS
>gid:1353  HP1332  co-chaperone and heat shock protein (dnaJ)
MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLIN
EAYGVLSDEKKRALYDRYGKKGLNQAGASQGDFSDFFEDLGSFFEDAFGF
GARGSKRQKSSIAPDYLQTLELSFKEAVFGCKKTIKVQYQSVCESCDGTG
AKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIVKTPCQACKG
KTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEAQVKED
EHFKREGCDLFIKAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDKQT
FAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKLHASFGYEG
EPHKSVLETCISKIKDWFK
>gid:1357  HP1336  H. pylori predicted coding region HP1336
MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTE
CFKKNYLLNWVYHALECVHEKDISAHSLEEVLQKSHLPIRIKIMAQNTLL
EKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDS
ERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKTLG
FIKHEDFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYRHIK
KHA
>gid:1386  HP1366  type IIS restriction enzyme R protein (MBOIIR)
MPKLEKILLEITQLDPSKECLKFLANRIKSSDYRGLHLSQHNRYDQNKIK
TIIQAIFNEVGGDFLQIRTTDMSKRPSNIIGEEIYAKVVDNICKSEMPQD
NSGKKNQVTQDSLRKNLFVDMHRMGLIERYNKNKEPTNPYIQSNIKYISL
TPLAIEFLNAQDLLRKNFCYTQALENLLQGFGAECREVMIELDNHYLDIE
EMMFFVTFLNIENFTRSEIIEYVRGYRSLSRIQKEKLKELVQDYCNPNHF
NGNKLEKRDYHNWKNQAQQIFSLLEQSVFFETNKERLILKALNEENKQND
KKLKRSIKEKALYFEKHGVKKEKGFELHHIVPLCLARSIEEFDLLDKWEN
LIYIDAFNHAKISQTQNKHICLYFKNCDVVLSKGLKEEQESLYLTYIENV
LYKLDLQNAMLKYNKDLLHSKNG
>gid:1393  HP1374  ATP-dependent protease ATPase subunit (clpX)
MNETLYCSFCKKPESRDPKKRRIIFASNLNKDVCVCEYCIDVMHGELHKY
DNSLLALKRDRLRRMESSAYEEEFLLSYIPAPKELKAVLDNYVIGQEQAK
KVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGP
TGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASD
WNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLV
NIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFT
QEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVD
ILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRA
IIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEPLIIAKTHSKILP
>gid:1398  HP1379  ATP-dependent protease (lon)
MTEDFPKILPLLVEEDTFLYPFMIAPIFLQNNASIKAVAYAKNNKSLVFI
ACQKDKLNDNEAPYYDVGVIGSVMREANMPNGRVKLLFNGIAKGRILEPA
KENEQGFLEAQISPIEYLEYDKENIQAIVEVLKEKVITLANVSSLFPPDL
IKALEDNDDPNRIADLIAAALHLKKDQAYSLFANNNTEQRLLDLIDIVIE
ETKTQKLQKEIKSKVHQKMEQTNKEYFLKEQLKQIQKELGTDKQRDEDLN
QYYQKLESIKPFLKEEAFKEIKKQIDRLSRTHADSSDSATLQNYIETMLD
VPFGQYGKKALDIKHVREQLDKDHYSLKRPKERIVEYFATMQLLEMRRKK
KPEKKDKTKGTILCFYGPPGVGKTSLANSIAKAIERPLVRIALGGLEDVN
ELRGHRRTYIGSMPGRIVQGLIEAKKMNPVMVLDEIDKVDRSVRGDPASA
LLEILDPEQNTAFRDHYANFSIDLSQVIFIATANNIDRIPAPLRDRMEFI
SVSSYTPNEKEEIAKNYLIPQELEKHALKPSEVEISHECLKLIIEKYTRE
AGVRDLRRQIATIMRKVALKYLEDNPHQKGRTKKGKNEKSEDQKSEDQKS
ENQKSENKDFCVSITPNNLKEYLERMVFEIDPIDEENKIGIVNGLAWTPV
GGDVLKIEVLKIRGKGELKLTGSLGDVMKESAIIAFSVVKVLLDNETLKV
PKIPSETDAEGKKKKKVLKVYNAYDLHLHVPEGATPKDGPSAGIAMASVM
ASILCDRATRSEVAMTGELTLSGEVLPIGGLKEKLIAAFKAGIKTALIPV
KNYERDLDEIPAEVRENLNIVAVKNIAEVLEKTLL
>gid:1455  HP1435  protease IV (PspA)
MWSFIQKIFKALIIAPLDFITKYFKSFVLLLIVLVFFSAKESAPSAPPNL
AKLYLNGAIFSTEDFDKEVDKILKTPSIKGVLLLIDSPGGAVSASVELSE
KIADLKQKMPVLAYARGVMASGSYYAGMQASEVYASKASLIGSIGVIFSG
ANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQNLVNEQYQM
FVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQDRLM
ELSKVKKAYWLEKSPMERFIEKATQSATNIITQAFGYQLLMR
>gid:1462  HP1441  peptidyl-prolyl cis-trans isomerase B, cyclosporin-type rotamase (ppi)
MMDPIKTYEIKEEELAKTAYATIKTNKGNIALELFYKDAPQAVSNFVTLA
KEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGPGHRIKCEVAHNPNKHKRG
SISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAEGLSVLDKIKQ
GDIIESVVFSSSL
>gid:1465  HP1444  small protein (smpB)
MKLIASNKKAYFDYEILETLEAGLALLGSEVKALRQTRVNLKDNFVKIIK
GEAFLFGVHISYLDTIHAYYKPNERRERKLLLHKKQLLKWQIEASKERLS
IVGLKLYFNQRNRAKIQIALVKGKRLHDKRQSLKEKALNKEILADLKHHF
KG
>gid:1479  HP1458  thioredoxin
MSEMINGKNYAEKIAHQAVVVNVGASWCPDCRKIEPIMENLAKTYKGKVE
FFKVSFDESQDLKESLGIRKIPTLIFYKNAKEVGERLVEPSSQKPIEDAL
KALL
>gid:1483  HP1462  secreted protein involved in flagellar motility
MFDKKLSSNDWHIQKVEMNHQVYDIETMLADSAFREHEEEQDSSLNTALP
EDKTAIEAKEQEQKEKRKRWYELFKKKPKPKSSMGEFVFDQKENRIYGKG
YCNRYFASYVWQGDRHIGIEDSGISRKVCKDEHLMAFELEFMENFKGNFT
VTKGKDTLILDNQKMKIYLKTP
>gid:1498  HP1477  H. pylori predicted coding region HP1477
MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPE
RFSNASILSYELNASNKLKKDGVVFLRLENDPNLRLPVRYSVIGSMQAFK
SVSAIKKDENITANNTQKERILFGALSNPLLEGAIDKVSAKNFIPPNTLL
STDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLE
SNKILKAKVLSSSKAQIL
>gid:1513  HP1492  conserved hypothetical nifU-like protein
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACK
TCSSSKITLKNVIERQLKMDIHPNLEVVCLENAKEFDKL
>gid:1583  HP1563  alkyl hydroperoxide reductase (tsaA)
MLVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGAILFFWPKDFTFVCP
TEIIAFDKRVKDFQEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVTFP
MVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNAD
EMLRMVDALLHFEEHGEVCPAGWRKGDKGMKATHQGVAEYLKENSIKL
>gid:1604  HP1584  sialoglycoprotease (gcp)
MILSIESSCDDSSLALTRIEDAQLIAHFKISQEKHHSSYGGVVPELASRL
HAENLPLLLERIKISLNKDFSKIKAIAITNQPGLSVTLIEGLMMAKALSL
SLNLPLILEDHLRGHVYSLFINEKQTCMPLSVLLVSGGHSLILEARDYEN
IKIVATSLDDSFGESFDKVSKMLDLGYPGGPIVEKLALDYRHPNEPLMFP
IPLKNSPNLAFSFSGLKNAVRLEVEKNAPNLNEAIKQKIGYHFQSAAIEH
LIQQTKRYFKIKRPKIFGIVGGASQNLALRKAFENLCDAFDCKLVLAPLE
FCSDNAAMIGRSSLEAYQKKRFVPLEKANISPRTLLKSFE