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2024-05-19 06:40:50

Gene list

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COG category: NOT ANALYZED
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

Number of genes found: 120

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Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA DVU_tRNA-Leu-3 tRNA-Leu chromosome tRNA1409622 85 + 0.588235
NA DvrnpB2 RNase P, RNA component pDV misc_RNA190003 435 - 0.751724
NA DVU_tRNA-Leu-7 tRNA-Leu chromosome tRNA2834620 87 - 0.597701
NA DVU_tRNA-Met-1 tRNA-Met chromosome tRNA417073 77 + 0.636364
NA DVU_tRNA-Asp-1 tRNA-Asp chromosome tRNA318914 77 + 0.649351
NA DVU_tRNA-Asn-2 tRNA-Asn chromosome tRNA2493503 76 + 0.618421
NA DVU_tRNA-Cys-1 tRNA-Cys chromosome tRNA2250471 75 + 0.6
NA DVU_tRNA-Thr-3 tRNA-Thr chromosome tRNA3019037 76 + 0.592105
NA DVU_tRNA-Leu-2 tRNA-Leu chromosome tRNA514247 87 - 0.586207
NA DVU_tRNA-Thr-4 tRNA-Thr chromosome tRNA3019375 76 + 0.526316
NA PHAGE02 chromosome misc_feature1556471 39622 - 0.581672
NA PHAGE01 chromosome misc_feature1204002 36574 - 0.647728
NA DVU_tRNA-Leu-6 tRNA-Leu chromosome tRNA2691138 87 - 0.586207
NA DVU_tRNA-Lys-3 tRNA-Lys chromosome tRNA1093621 76 - 0.526316
NA DVU3304 chromosome pseudo3481262 1479 + 0.640974
NA DVU_tRNA-Ser-4 tRNA-Ser chromosome tRNA1596079 95 - 0.589474
NA DVU_tRNA-Gly-4 tRNA-Gly chromosome tRNA2303987 75 + 0.573333
NA DVU2950 chromosome pseudo3054878 1718 - 0.654831
NA DVU_tRNA-Pro-3 tRNA-Pro chromosome tRNA3163832 77 + 0.571429
NA DVU_tRNA-Gly-3 tRNA-Gly chromosome tRNA2250660 75 + 0.573333
NA DVU_tRNA-Arg-6 tRNA-Arg chromosome tRNA3484533 77 - 0.558442
NA DVU_tRNA-Arg-1 tRNA-Arg chromosome tRNA1648221 77 - 0.584416
NA PHAGE06 chromosome misc_feature2799314 35276 + 0.648685
NA DVU1831 chromosome pseudo1896865 827 + 0.575574
NA DVU_tRNA-Pro-1 tRNA-Pro chromosome tRNA1723546 77 - 0.649351
NA PHAGE03 chromosome misc_feature1719951 3473 + 0.615606
NA DVU_tRNA-Tyr-1 tRNA-Tyr chromosome tRNA3019119 86 + 0.55814
NA DVU_tRNA-Ala-6 tRNA-Ala chromosome tRNA2562567 76 - 0.657895
NA PHAGE04 chromosome misc_feature1770731 52191 - 0.583875
NA DVU_tRNA-Val-2 tRNA-Val chromosome tRNA2651265 75 - 0.586667
NA DvrnpB1 RNase P, RNA component chromosome misc_RNA1533841 356 - 0.646067
NA DVU_tRNA-Met-2 tRNA-Met chromosome tRNA1536123 76 - 0.592105
NA DVU_tRNA-Ser-3 tRNA-Ser chromosome tRNA911334 95 - 0.610526
NA PHAGE08 chromosome misc_feature233143 37436 - 0.636179
NA DVU_tRNA-Arg-4 tRNA-Arg chromosome tRNA1770704 77 + 0.584416
NA DVU_tRNA-Met-4 tRNA-Met chromosome tRNA2129162 77 - 0.636364
NA DVU_tRNA-Arg-2 tRNA-Arg chromosome tRNA1648317 77 - 0.636364
NA DVU_tRNA-His-1 tRNA-His chromosome tRNA3433963 76 + 0.618421
NA DVU1149 chromosome pseudo1244292 785 - 0.6
NA DVU0248 chromosome pseudo281313 2109 - 0.651019
NA pDV repeat_region175897 1818 - 0.663916
NA DVU3126 chromosome pseudo3273316 1232 + 0.605519
NA DVU_tRNA-Ala-1 tRNA-Ala chromosome tRNA19895 76 + 0.539474
NA DVU_tRNA-Lys-1 tRNA-Lys chromosome tRNA270532 76 - 0.539474
NA DVU_tRNA-Thr-1 tRNA-Thr chromosome tRNA407052 76 - 0.539474
NA DVU_tRNA-Phe-1 tRNA-Phe chromosome tRNA3422895 76 - 0.578947
NA DVU2049 chromosome pseudo2126385 467 + 0.591006
NA DVU_tRNA-Arg-3 tRNA-Arg chromosome tRNA1648426 77 - 0.597403
NA DVU0557 chromosome pseudo624872 855 + 0.581287
NA DVU_tRNA-Leu-1 tRNA-Leu chromosome tRNA189726 87 - 0.597701
NA DVU_tRNA-Gln-2 tRNA-Gln chromosome tRNA3061754 75 + 0.56
NA DVU_tRNA-Glu-2 tRNA-Glu chromosome tRNA709268 77 + 0.623377
NA DVU2001 chromosome pseudo2082778 1262 + 0.540412
NA DVU_tRNA-Gly-5 tRNA-Gly chromosome tRNA3019262 77 + 0.571429
NA DVU_tRNA-Ile-3 tRNA-Ile chromosome tRNA2562665 77 - 0.61039
NA DVU_tRNA-Ser-1 tRNA-Ser chromosome tRNA775707 92 + 0.630435
NA DVU1643 chromosome pseudo1722892 535 + 0.611215
NA DVU3280 chromosome pseudo3455425 986 + 0.690669
NA DVU_tRNA-Asn-1 tRNA-Asn chromosome tRNA2474950 76 + 0.618421
NA DVU_tRNA-Pro-2 tRNA-Pro chromosome tRNA2163497 78 + 0.628205
NA DVU_tRNA-Asp-2 tRNA-Asp chromosome tRNA319062 77 + 0.649351
NA DVU_tRNA-Thr-2 tRNA-Thr chromosome tRNA1203891 76 + 0.513158
NA DVU_tRNA-Ala-2 tRNA-Ala chromosome tRNA30047 76 + 0.539474
NA DVU_tRNA-Ala-4 tRNA-Ala chromosome tRNA296610 76 + 0.657895
NA DVU_tRNA-Glu-1 tRNA-Glu chromosome tRNA672676 77 - 0.623377
NA PHAGE07 chromosome misc_feature2936186 41517 + 0.625431
NA DVU_tRNA-Leu-5 tRNA-Leu chromosome tRNA2069693 87 + 0.563218
NA DVU_tRNA-Ser-2 tRNA-Ser chromosome tRNA878976 92 - 0.576087
NA DVU_tRNA-Pseudo-1 chromosome tRNA233143 73 - 0.534247
NA DVU2438 chromosome pseudo2542325 2363 - 0.675836
NA DVU_tRNA-Gly-2 tRNA-Gly chromosome tRNA2250553 75 + 0.573333
NA DVU_tRNA-Trp-1 tRNA-Trp chromosome tRNA3020869 77 + 0.61039
NA DVU_tRNA-Ile-5 tRNA-Ile chromosome tRNA3250458 77 - 0.61039
NA DVU0490 chromosome pseudo558218 1270 - 0.648031
NA DVU_tRNA-Arg-5 tRNA-Arg chromosome tRNA2977658 77 - 0.649351
NA DVU_tRNA-Leu-4 tRNA-Leu chromosome tRNA1755794 87 - 0.586207
NA DVU1146 chromosome pseudo1241053 534 + 0.543071
NA DVU0699 chromosome pseudo773972 1679 + 0.61763
NA DVU_tRNA-Val-1 tRNA-Val chromosome tRNA318835 76 + 0.684211
NA DVU_tRNA-Ala-8 tRNA-Ala chromosome tRNA3250360 76 - 0.657895
NA DVU2050 chromosome pseudo2126667 751 + 0.613848
NA DVU_tRNA-Glu-3 tRNA-Glu chromosome tRNA3061846 78 + 0.641026
NA DVU_tRNA-Ile-1 tRNA-Ile chromosome tRNA107515 77 + 0.61039
NA DVU_tRNA-Lys-2 tRNA-Lys chromosome tRNA1093354 76 - 0.526316
NA DVU_tRNA-SeC(p)-1 tRNA-Sec chromosome tRNA1369507 90 - 0.544444
NA DVU_tRNA-Ile-2 tRNA-Ile chromosome tRNA296511 77 + 0.61039
NA DVU_tRNA-Ile-4 tRNA-Ile chromosome tRNA2696064 77 - 0.61039
NA DVU_tRNA-Met-3 tRNA-Met chromosome tRNA1740153 77 - 0.597403
NA PHAGE05 chromosome misc_feature2250686 43372 - 0.609218
NA DVU_tRNA-Ala-3 tRNA-Ala chromosome tRNA107614 76 + 0.657895
NA DVU_tRNA-Gly-1 tRNA-Gly chromosome tRNA2250385 75 + 0.573333
NA DVU_tRNA-Ala-5 tRNA-Ala chromosome tRNA2356165 76 + 0.592105
NA DVU_tRNA-Gln-1 tRNA-Gln chromosome tRNA1658278 76 - 0.605263
NA DVU_tRNA-Val-3 tRNA-Val chromosome tRNA3287469 76 - 0.657895
NA DVU_tRNA-Ala-7 tRNA-Ala chromosome tRNA2695966 76 - 0.657895
ISD1 DVU_IS02 chromosome repeat_region2089103 1200 - 0.525
ISD1 DVU_IS01 chromosome repeat_region628316 1200 + 0.5225
ISDvu2 DVU_IS03 chromosome repeat_region81908 1311 + 0.714722
ISDvu2 DVU_IS06 chromosome repeat_region1561884 1311 - 0.604119
ISDvu2 DVU_IS05 chromosome repeat_region1395286 1311 + 0.611747
ISDvu2 DVU_IS04 chromosome repeat_region750913 1311 - 0.633105
ISDvu3 DVU_IS07 chromosome repeat_region624615 1112 + 0.572842
ISDvu4 DVU_IS08 chromosome repeat_region1370144 1220 + 0.622951
ISDvu4 DVU_IS09 chromosome repeat_region3395155 1220 - 0.631967
rrfA Dv5SA 5S ribosomal RNA chromosome rRNA110870 117 + 0.615385
rrfB Dv5SB 5S ribosomal RNA chromosome rRNA299866 117 + 0.615385
rrfC Dv5SC 5S ribosomal RNA chromosome rRNA2559270 117 - 0.615385
rrfD Dv5SD 5S ribosomal RNA chromosome rRNA2692669 117 - 0.615385
rrfE Dv5SE 5S ribosomal RNA chromosome rRNA3247063 117 - 0.615385
rrlA Dv23SA 23S ribosomal RNA chromosome rRNA107842 2921 + 0.545361
rrlB Dv23SB 23S ribosomal RNA chromosome rRNA296838 2921 + 0.545361
rrlC Dv23SC 23S ribosomal RNA chromosome rRNA2559494 2921 - 0.545361
rrlD Dv23SD 23S ribosomal RNA chromosome rRNA2692893 2921 - 0.545361
rrlE Dv23SE 23S ribosomal RNA chromosome rRNA3247287 2921 - 0.545361
rrsA Dv16SA 16S ribosomal RNA chromosome rRNA105921 1506 + 0.575033
rrsB Dv16SB 16S ribosomal RNA chromosome rRNA294917 1506 + 0.574369
rrsC Dv16SC 16S ribosomal RNA chromosome rRNA2562830 1506 - 0.573705
rrsD Dv16SD 16S ribosomal RNA chromosome rRNA2696229 1506 - 0.573705
rrsE Dv16SE 16S ribosomal RNA chromosome rRNA3250623 1506 - 0.573041
ssrA DvtmRNA1 10Sa RNA chromosome misc_RNA1922270 352 + 0.590909