Gene list
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COG category: NOT ANALYZED
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
Number of genes found: 120
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | DVU_tRNA-Ala-7 | tRNA-Ala | chromosome | tRNA | 2695966 | 76 | - | 0.657895 |
NA | PHAGE06 | chromosome | misc_feature | 2799314 | 35276 | + | 0.648685 | |
NA | DVU_tRNA-Thr-3 | tRNA-Thr | chromosome | tRNA | 3019037 | 76 | + | 0.592105 |
NA | DVU_tRNA-Thr-1 | tRNA-Thr | chromosome | tRNA | 407052 | 76 | - | 0.539474 |
NA | DVU_tRNA-Arg-3 | tRNA-Arg | chromosome | tRNA | 1648426 | 77 | - | 0.597403 |
NA | DVU_tRNA-Ala-2 | tRNA-Ala | chromosome | tRNA | 30047 | 76 | + | 0.539474 |
NA | DVU_tRNA-Leu-1 | tRNA-Leu | chromosome | tRNA | 189726 | 87 | - | 0.597701 |
NA | DVU_tRNA-Ser-1 | tRNA-Ser | chromosome | tRNA | 775707 | 92 | + | 0.630435 |
NA | DVU2050 | chromosome | pseudo | 2126667 | 751 | + | 0.613848 | |
NA | DVU_tRNA-Leu-7 | tRNA-Leu | chromosome | tRNA | 2834620 | 87 | - | 0.597701 |
NA | DVU_tRNA-Pro-3 | tRNA-Pro | chromosome | tRNA | 3163832 | 77 | + | 0.571429 |
NA | DVU1831 | chromosome | pseudo | 1896865 | 827 | + | 0.575574 | |
NA | DVU_tRNA-Arg-6 | tRNA-Arg | chromosome | tRNA | 3484533 | 77 | - | 0.558442 |
NA | DVU_tRNA-Ser-2 | tRNA-Ser | chromosome | tRNA | 878976 | 92 | - | 0.576087 |
NA | PHAGE08 | chromosome | misc_feature | 233143 | 37436 | - | 0.636179 | |
NA | DVU1149 | chromosome | pseudo | 1244292 | 785 | - | 0.6 | |
NA | DVU_tRNA-Ile-4 | tRNA-Ile | chromosome | tRNA | 2696064 | 77 | - | 0.61039 |
NA | DVU_tRNA-Trp-1 | tRNA-Trp | chromosome | tRNA | 3020869 | 77 | + | 0.61039 |
NA | DVU_tRNA-Ile-3 | tRNA-Ile | chromosome | tRNA | 2562665 | 77 | - | 0.61039 |
NA | DVU_tRNA-Val-1 | tRNA-Val | chromosome | tRNA | 318835 | 76 | + | 0.684211 |
NA | DvrnpB2 | RNase P, RNA component | pDV | misc_RNA | 190003 | 435 | - | 0.751724 |
NA | DVU2438 | chromosome | pseudo | 2542325 | 2363 | - | 0.675836 | |
NA | DVU_tRNA-Arg-4 | tRNA-Arg | chromosome | tRNA | 1770704 | 77 | + | 0.584416 |
NA | DVU_tRNA-Ala-3 | tRNA-Ala | chromosome | tRNA | 107614 | 76 | + | 0.657895 |
NA | DVU_tRNA-Gly-5 | tRNA-Gly | chromosome | tRNA | 3019262 | 77 | + | 0.571429 |
NA | DVU_tRNA-Arg-2 | tRNA-Arg | chromosome | tRNA | 1648317 | 77 | - | 0.636364 |
NA | DVU_tRNA-Asp-1 | tRNA-Asp | chromosome | tRNA | 318914 | 77 | + | 0.649351 |
NA | DVU_tRNA-Met-1 | tRNA-Met | chromosome | tRNA | 417073 | 77 | + | 0.636364 |
NA | DVU_tRNA-Gly-4 | tRNA-Gly | chromosome | tRNA | 2303987 | 75 | + | 0.573333 |
NA | DVU_tRNA-Ala-6 | tRNA-Ala | chromosome | tRNA | 2562567 | 76 | - | 0.657895 |
NA | DVU_tRNA-Met-2 | tRNA-Met | chromosome | tRNA | 1536123 | 76 | - | 0.592105 |
NA | DVU_tRNA-Pro-1 | tRNA-Pro | chromosome | tRNA | 1723546 | 77 | - | 0.649351 |
NA | DVU0490 | chromosome | pseudo | 558218 | 1270 | - | 0.648031 | |
NA | DVU_tRNA-Ser-3 | tRNA-Ser | chromosome | tRNA | 911334 | 95 | - | 0.610526 |
NA | DVU_tRNA-Ala-1 | tRNA-Ala | chromosome | tRNA | 19895 | 76 | + | 0.539474 |
NA | DVU_tRNA-Ile-2 | tRNA-Ile | chromosome | tRNA | 296511 | 77 | + | 0.61039 |
NA | DVU_tRNA-Arg-5 | tRNA-Arg | chromosome | tRNA | 2977658 | 77 | - | 0.649351 |
NA | DVU_tRNA-Cys-1 | tRNA-Cys | chromosome | tRNA | 2250471 | 75 | + | 0.6 |
NA | PHAGE07 | chromosome | misc_feature | 2936186 | 41517 | + | 0.625431 | |
NA | DVU_tRNA-Tyr-1 | tRNA-Tyr | chromosome | tRNA | 3019119 | 86 | + | 0.55814 |
NA | DVU_tRNA-Gly-2 | tRNA-Gly | chromosome | tRNA | 2250553 | 75 | + | 0.573333 |
NA | DVU_tRNA-Met-4 | tRNA-Met | chromosome | tRNA | 2129162 | 77 | - | 0.636364 |
NA | DVU_tRNA-Glu-1 | tRNA-Glu | chromosome | tRNA | 672676 | 77 | - | 0.623377 |
NA | DVU_tRNA-Glu-3 | tRNA-Glu | chromosome | tRNA | 3061846 | 78 | + | 0.641026 |
NA | DVU2049 | chromosome | pseudo | 2126385 | 467 | + | 0.591006 | |
NA | DVU0699 | chromosome | pseudo | 773972 | 1679 | + | 0.61763 | |
NA | DVU_tRNA-Ile-5 | tRNA-Ile | chromosome | tRNA | 3250458 | 77 | - | 0.61039 |
NA | DVU_tRNA-Gln-1 | tRNA-Gln | chromosome | tRNA | 1658278 | 76 | - | 0.605263 |
NA | DVU_tRNA-Thr-2 | tRNA-Thr | chromosome | tRNA | 1203891 | 76 | + | 0.513158 |
NA | DVU_tRNA-Pseudo-1 | chromosome | tRNA | 233143 | 73 | - | 0.534247 | |
NA | DVU3280 | chromosome | pseudo | 3455425 | 986 | + | 0.690669 | |
NA | DVU2950 | chromosome | pseudo | 3054878 | 1718 | - | 0.654831 | |
NA | DVU_tRNA-Lys-2 | tRNA-Lys | chromosome | tRNA | 1093354 | 76 | - | 0.526316 |
NA | DVU_tRNA-Ala-5 | tRNA-Ala | chromosome | tRNA | 2356165 | 76 | + | 0.592105 |
NA | DVU_tRNA-Phe-1 | tRNA-Phe | chromosome | tRNA | 3422895 | 76 | - | 0.578947 |
NA | DVU_tRNA-Thr-4 | tRNA-Thr | chromosome | tRNA | 3019375 | 76 | + | 0.526316 |
NA | DVU_tRNA-Gly-1 | tRNA-Gly | chromosome | tRNA | 2250385 | 75 | + | 0.573333 |
NA | DVU_tRNA-Leu-6 | tRNA-Leu | chromosome | tRNA | 2691138 | 87 | - | 0.586207 |
NA | DVU_tRNA-Leu-5 | tRNA-Leu | chromosome | tRNA | 2069693 | 87 | + | 0.563218 |
NA | PHAGE05 | chromosome | misc_feature | 2250686 | 43372 | - | 0.609218 | |
NA | DVU_tRNA-Glu-2 | tRNA-Glu | chromosome | tRNA | 709268 | 77 | + | 0.623377 |
NA | DVU_tRNA-Asp-2 | tRNA-Asp | chromosome | tRNA | 319062 | 77 | + | 0.649351 |
NA | DVU_tRNA-Gln-2 | tRNA-Gln | chromosome | tRNA | 3061754 | 75 | + | 0.56 |
NA | DVU_tRNA-Lys-3 | tRNA-Lys | chromosome | tRNA | 1093621 | 76 | - | 0.526316 |
NA | DVU_tRNA-Ile-1 | tRNA-Ile | chromosome | tRNA | 107515 | 77 | + | 0.61039 |
NA | PHAGE04 | chromosome | misc_feature | 1770731 | 52191 | - | 0.583875 | |
NA | DVU_tRNA-Arg-1 | tRNA-Arg | chromosome | tRNA | 1648221 | 77 | - | 0.584416 |
NA | DVU_tRNA-Met-3 | tRNA-Met | chromosome | tRNA | 1740153 | 77 | - | 0.597403 |
NA | DVU_tRNA-His-1 | tRNA-His | chromosome | tRNA | 3433963 | 76 | + | 0.618421 |
NA | DvrnpB1 | RNase P, RNA component | chromosome | misc_RNA | 1533841 | 356 | - | 0.646067 |
NA | DVU_tRNA-Pro-2 | tRNA-Pro | chromosome | tRNA | 2163497 | 78 | + | 0.628205 |
NA | DVU_tRNA-Leu-4 | tRNA-Leu | chromosome | tRNA | 1755794 | 87 | - | 0.586207 |
NA | DVU_tRNA-Leu-3 | tRNA-Leu | chromosome | tRNA | 1409622 | 85 | + | 0.588235 |
NA | DVU3304 | chromosome | pseudo | 3481262 | 1479 | + | 0.640974 | |
NA | DVU_tRNA-Asn-1 | tRNA-Asn | chromosome | tRNA | 2474950 | 76 | + | 0.618421 |
NA | DVU2001 | chromosome | pseudo | 2082778 | 1262 | + | 0.540412 | |
NA | DVU_tRNA-Asn-2 | tRNA-Asn | chromosome | tRNA | 2493503 | 76 | + | 0.618421 |
NA | DVU_tRNA-Leu-2 | tRNA-Leu | chromosome | tRNA | 514247 | 87 | - | 0.586207 |
NA | DVU0557 | chromosome | pseudo | 624872 | 855 | + | 0.581287 | |
NA | PHAGE03 | chromosome | misc_feature | 1719951 | 3473 | + | 0.615606 | |
NA | DVU_tRNA-SeC(p)-1 | tRNA-Sec | chromosome | tRNA | 1369507 | 90 | - | 0.544444 |
NA | DVU_tRNA-Ala-8 | tRNA-Ala | chromosome | tRNA | 3250360 | 76 | - | 0.657895 |
NA | DVU_tRNA-Val-2 | tRNA-Val | chromosome | tRNA | 2651265 | 75 | - | 0.586667 |
NA | PHAGE01 | chromosome | misc_feature | 1204002 | 36574 | - | 0.647728 | |
NA | PHAGE02 | chromosome | misc_feature | 1556471 | 39622 | - | 0.581672 | |
NA | DVU_tRNA-Ala-4 | tRNA-Ala | chromosome | tRNA | 296610 | 76 | + | 0.657895 |
NA | pDV | repeat_region | 175897 | 1818 | - | 0.663916 | ||
NA | DVU3126 | chromosome | pseudo | 3273316 | 1232 | + | 0.605519 | |
NA | DVU_tRNA-Lys-1 | tRNA-Lys | chromosome | tRNA | 270532 | 76 | - | 0.539474 |
NA | DVU0248 | chromosome | pseudo | 281313 | 2109 | - | 0.651019 | |
NA | DVU_tRNA-Gly-3 | tRNA-Gly | chromosome | tRNA | 2250660 | 75 | + | 0.573333 |
NA | DVU1146 | chromosome | pseudo | 1241053 | 534 | + | 0.543071 | |
NA | DVU_tRNA-Val-3 | tRNA-Val | chromosome | tRNA | 3287469 | 76 | - | 0.657895 |
NA | DVU1643 | chromosome | pseudo | 1722892 | 535 | + | 0.611215 | |
NA | DVU_tRNA-Ser-4 | tRNA-Ser | chromosome | tRNA | 1596079 | 95 | - | 0.589474 |
ISD1 | DVU_IS01 | chromosome | repeat_region | 628316 | 1200 | + | 0.5225 | |
ISD1 | DVU_IS02 | chromosome | repeat_region | 2089103 | 1200 | - | 0.525 | |
ISDvu2 | DVU_IS03 | chromosome | repeat_region | 81908 | 1311 | + | 0.714722 | |
ISDvu2 | DVU_IS04 | chromosome | repeat_region | 750913 | 1311 | - | 0.633105 | |
ISDvu2 | DVU_IS05 | chromosome | repeat_region | 1395286 | 1311 | + | 0.611747 | |
ISDvu2 | DVU_IS06 | chromosome | repeat_region | 1561884 | 1311 | - | 0.604119 | |
ISDvu3 | DVU_IS07 | chromosome | repeat_region | 624615 | 1112 | + | 0.572842 | |
ISDvu4 | DVU_IS09 | chromosome | repeat_region | 3395155 | 1220 | - | 0.631967 | |
ISDvu4 | DVU_IS08 | chromosome | repeat_region | 1370144 | 1220 | + | 0.622951 | |
rrfA | Dv5SA | 5S ribosomal RNA | chromosome | rRNA | 110870 | 117 | + | 0.615385 |
rrfB | Dv5SB | 5S ribosomal RNA | chromosome | rRNA | 299866 | 117 | + | 0.615385 |
rrfC | Dv5SC | 5S ribosomal RNA | chromosome | rRNA | 2559270 | 117 | - | 0.615385 |
rrfD | Dv5SD | 5S ribosomal RNA | chromosome | rRNA | 2692669 | 117 | - | 0.615385 |
rrfE | Dv5SE | 5S ribosomal RNA | chromosome | rRNA | 3247063 | 117 | - | 0.615385 |
rrlA | Dv23SA | 23S ribosomal RNA | chromosome | rRNA | 107842 | 2921 | + | 0.545361 |
rrlB | Dv23SB | 23S ribosomal RNA | chromosome | rRNA | 296838 | 2921 | + | 0.545361 |
rrlC | Dv23SC | 23S ribosomal RNA | chromosome | rRNA | 2559494 | 2921 | - | 0.545361 |
rrlD | Dv23SD | 23S ribosomal RNA | chromosome | rRNA | 2692893 | 2921 | - | 0.545361 |
rrlE | Dv23SE | 23S ribosomal RNA | chromosome | rRNA | 3247287 | 2921 | - | 0.545361 |
rrsA | Dv16SA | 16S ribosomal RNA | chromosome | rRNA | 105921 | 1506 | + | 0.575033 |
rrsB | Dv16SB | 16S ribosomal RNA | chromosome | rRNA | 294917 | 1506 | + | 0.574369 |
rrsC | Dv16SC | 16S ribosomal RNA | chromosome | rRNA | 2562830 | 1506 | - | 0.573705 |
rrsD | Dv16SD | 16S ribosomal RNA | chromosome | rRNA | 2696229 | 1506 | - | 0.573705 |
rrsE | Dv16SE | 16S ribosomal RNA | chromosome | rRNA | 3250623 | 1506 | - | 0.573041 |
ssrA | DvtmRNA1 | 10Sa RNA | chromosome | misc_RNA | 1922270 | 352 | + | 0.590909 |