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2024-05-02 10:14:48

Gene list

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COG category: NOT ANALYZED
Organism: Treponema denticola ATCC 35405, ATCC 35405

Number of genes found: 71

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema denticola ATCC 35405, ATCC 35405
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TDE_tRNA-Thr-2 tRNA-Thrchromosome tRNA1680012 73 - 0.589041
NA TDE_tRNA-Cys-1 tRNA-Cyschromosome tRNA31732 72 + 0.541667
NA TDE_tRNA-Glu-2 tRNA-Gluchromosome tRNA2836822 72 + 0.5
NA TDE_tRNA-Pro-2 tRNA-Prochromosome tRNA2346434 73 + 0.589041
NA TDE2455 chromosome pseudo2483617 568 - 0.348592
NA TDE_tRNA-Arg-4 tRNA-Argchromosome tRNA2346520 77 + 0.571429
NA TDE0684 chromosome pseudo721437 396 + 0.386364
NA TDE_tRNA-Lys-1 tRNA-Lyschromosome tRNA2555330 73 - 0.506849
NA TDE_tRNA-Leu-1 tRNA-Leuchromosome tRNA884545 82 + 0.560976
NA TDE_tRNA-Thr-1 tRNA-Thrchromosome tRNA1584328 75 + 0.52
NA TDE0734 chromosome pseudo774190 580 - 0.42069
NA TDE_tRNA-Met-1 tRNA-Metchromosome tRNA1202619 73 - 0.520548
NA TDE_tRNA-Asn-1 tRNA-Asnchromosome tRNA1018212 76 - 0.618421
NA TDE_tRNA-SeC(p)-1 tRNA-Secchromosome tRNA1090480 88 + 0.556818
NA TDE_tRNA-Leu-2 tRNA-Leuchromosome tRNA1724782 83 + 0.554217
NA TDE_tRNA-Arg-1 tRNA-Argchromosome tRNA250948 74 - 0.581081
NA TDE_tRNA-Gly-1 tRNA-Glychromosome tRNA1724894 72 + 0.583333
NA TDE_tRNA-Ile-1 tRNA-Ilechromosome tRNA1221484 74 + 0.5
NA TDE_tRNA-Pro-3 tRNA-Prochromosome tRNA2616226 72 - 0.666667
NA TDE_tRNA-His-1 tRNA-Hischromosome tRNA1960359 72 - 0.541667
NA TDE1653 chromosome pseudo1700601 1702 - 0.317274
NA TDE_tRNA-Thr-3 tRNA-Thrchromosome tRNA2456424 73 - 0.561644
NA TDE_tRNA-Ala-1 tRNA-Alachromosome tRNA611869 74 + 0.581081
NA TDE_tRNA-Val-2 tRNA-Valchromosome tRNA2079695 74 + 0.621622
NA TDE_tRNA-Glu-1 tRNA-Gluchromosome tRNA1551533 72 + 0.513889
NA TDE_tRNA-Pseudo-2 chromosome tRNA251033 87 - 0.643678
NA TDE2203 chromosome pseudo2239716 1364 - 0.406158
NA TDE1189 chromosome pseudo1216709 1457 - 0.434454
NA TDE_tRNA-Gln-1 tRNA-Glnchromosome tRNA1376314 73 + 0.575342
NA TDE_tRNA-Ser-2 tRNA-Serchromosome tRNA251146 85 - 0.635294
NA TDE0265 chromosome pseudo297353 256 - 0.28125
NA TDE_tRNA-Met-2 tRNA-Metchromosome tRNA1395627 73 - 0.630137
NA TDE_tRNA-Arg-3 tRNA-Argchromosome tRNA1960253 74 - 0.608108
NA TDE1680 chromosome pseudo1731155 1862 - 0.379699
NA TDE_tRNA-Leu-5 tRNA-Leuchromosome tRNA2623417 83 - 0.53012
NA TDE_tRNA-Phe-1 tRNA-Phechromosome tRNA1789641 73 + 0.520548
NA TDE0983 chromosome pseudo1008576 1024 + 0.389648
NA TDE_tRNA-Lys-2 tRNA-Lyschromosome tRNA2682138 73 - 0.547945
NA TDE_tRNA-Ala-3 tRNA-Alachromosome tRNA2807414 73 + 0.506849
NA TDE0247 chromosome pseudo281864 243 - 0.399177
NA TDE1295 chromosome pseudo1332424 954 - 0.41195
NA TDE_tRNA-Leu-3 tRNA-Leuchromosome tRNA1795537 83 + 0.590361
NA TDE_tRNA-Pro-1 tRNA-Prochromosome tRNA1797908 74 - 0.608108
NA TDE_tRNA-Arg-2 tRNA-Argchromosome tRNA1949078 74 - 0.567568
NA TDE_tRNA-Pseudo-1 chromosome tRNA250822 85 - 0.623529
NA TDE_tRNA-Met-3 tRNA-Metchromosome tRNA2354124 74 + 0.621622
NA TDE2067 chromosome pseudo2092294 1793 + 0.450084
NA TDE2331 chromosome pseudo2367265 364 - 0.324176
NA TDE_tRNA-Trp-1 tRNA-Trpchromosome tRNA2456096 73 - 0.547945
NA TDE1016 chromosome pseudo1045669 2405 + 0.394179
NA TDE_tRNA-Ser-1 tRNA-Serchromosome tRNA250688 87 - 0.563218
NA TDE_tRNA-Leu-4 tRNA-Leuchromosome tRNA2058210 87 + 0.482759
NA TDE_tRNA-Gln-2 tRNA-Glnchromosome tRNA2836733 71 + 0.56338
NA TDE0159 chromosome pseudo186028 478 - 0.3159
NA TDE_tRNA-Asp-1 tRNA-Aspchromosome tRNA2616352 75 - 0.706667
NA TDE_tRNA-Ala-2 tRNA-Alachromosome tRNA684725 73 + 0.479452
NA TDE_tRNA-Gly-2 tRNA-Glychromosome tRNA1943843 72 + 0.569444
NA TDE_tRNA-Tyr-1 tRNA-Tyrchromosome tRNA1584409 82 + 0.560976
NA TDE1879 chromosome pseudo1900789 1747 - 0.469376
NA TDE_tRNA-Val-1 tRNA-Valchromosome tRNA1807238 74 + 0.5
ppa TDE0651 chromosome pseudo685993 2072 - 0.452703
prfB TDE2046 chromosome pseudo2075020 1123 - 0.422084
prtP TDE0762 chromosome pseudo802042 2168 + 0.445572
rnpB TDE_rnpB RNase P RNA componentchromosome misc_RNA1388132 326 + 0.466258
rrfA TDE_5SA 5S ribosomal RNAchromosome rRNA615208 111 + 0.540541
rrfB TDE_5SB 5S ribosomal RNAchromosome rRNA1224812 111 + 0.540541
rrlA TDE_23SA 23S ribosomal RNAchromosome rRNA612128 2910 + 0.494502
rrlB TDE_23SB 23S ribosomal RNAchromosome rRNA1221739 2910 + 0.494845
rrsA TDE_16SA 16S ribosomal RNAchromosome rRNA610211 1516 + 0.526385
rrsB TDE_16SB 16S ribosomal RNAchromosome rRNA1219839 1516 + 0.527045
ssrA TDE_tmRNA 10Sa RNAchromosome misc_RNA246212 351 - 0.527066