Gene list
Applied filters:
COG category: NOT ANALYZED
Organism: Escherichia coli, JEF100
Number of genes found: 240
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli, JEF100 | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pCoo | misc_feature | 62590 | 477 | + | 0.549266 | |||
NA | pCoo | misc_feature | 71344 | 144 | - | 0.263889 | |||
NA | pCoo | misc_feature | 76486 | 66 | + | 0.590909 | |||
NA | pCoo | misc_feature | 93176 | 33 | - | 0.454545 | |||
NA | pCoo | misc_feature | 72602 | 138 | + | 0.521739 | |||
NA | pCoo | repeat_unit | 17305 | 5 | + | 0.2 | |||
NA | pCoo | misc_feature | 45980 | 187 | - | 0.363636 | |||
NA | pCoo | misc_feature | 9349 | 441 | + | 0.455782 | |||
NA | pCoo | misc_feature | 48447 | 264 | + | 0.515152 | |||
NA | pCoo | misc_feature | 59459 | 534 | - | 0.543071 | |||
NA | pCoo | repeat_unit | 15351 | 28 | + | 0.464286 | |||
NA | pCoo | repeat_unit | 46922 | 23 | - | 0.434783 | |||
NA | pCoo | misc_feature | 52453 | 339 | + | 0.463127 | |||
NA | pCoo | misc_feature | 41478 | 66 | + | 0.30303 | |||
NA | pCoo | repeat_unit | 67628 | 23 | - | 0.434783 | |||
NA | pCoo | repeat_unit | 56218 | 6 | + | 0.5 | |||
NA | pCoo | misc_feature | 72256 | 198 | - | 0.318182 | |||
NA | pCoo | misc_feature | 37447 | 216 | + | 0.518519 | |||
NA | pCoo | misc_feature | 91628 | 33 | - | 0.545455 | |||
NA | pCoo | misc_feature | 33125 | 855 | - | 0.424561 | |||
NA | pCoo | repeat_unit | 19831 | 6 | + | ||||
NA | pCoo | repeat_unit | 60424 | 5 | + | 0.4 | |||
NA | pCoo | misc_feature | 60287 | 204 | - | 0.5 | |||
NA | pCoo | repeat_unit | 58465 | 5 | + | 0.2 | |||
NA | pCoo | misc_feature | 88744 | 1230 | - | 0.491057 | |||
NA | pCoo | misc_feature | 25775 | 70 | + | 0.485714 | |||
NA | pCoo | misc_feature | 22055 | 327 | - | 0.452599 | |||
NA | pCoo | repeat_region | 67628 | 752 | + | 0.49734 | |||
NA | pCoo007 | IS3 family transposase | pCoo | pseudo | 5047 | 819 | + | 0.494505 | |
NA | pCoo | misc_feature | 67986 | 378 | + | 0.497355 | |||
NA | pCoo | misc_feature | 88646 | 106 | - | 0.377358 | |||
NA | pCoo | misc_feature | 25793 | 372 | + | 0.567204 | |||
NA | pCoo | misc_feature | 58611 | 540 | - | 0.511111 | |||
NA | pCoo | repeat_region | 67620 | 8 | + | 0.375 | |||
NA | pCoo | repeat_unit | 82977 | 19 | - | 0.578947 | |||
NA | pCoo | misc_feature | 91725 | 408 | - | 0.477941 | |||
NA | pCoo | misc_feature | 27866 | 786 | + | 0.568702 | |||
NA | pCoo | repeat_unit | 61849 | 147 | + | 0.482993 | |||
NA | pCoo | misc_feature | 15849 | 24 | - | 0.625 | |||
NA | pCoo | repeat_unit | 82093 | 19 | + | 0.631579 | |||
NA | pCoo | misc_feature | 48749 | 390 | + | 0.530769 | |||
NA | pCoo | misc_feature | 17490 | 255 | + | 0.501961 | |||
NA | pCoo043 | IS630 transposase (fragment) | pCoo | pseudo | 31770 | 243 | + | 0.485597 | |
NA | pCoo | misc_feature | 60221 | 66 | - | 0.515152 | |||
NA | pCoo | misc_feature | 6365 | 2252 | + | 0.420071 | |||
NA | pCoo | misc_feature | 58968 | 24 | - | 0.625 | |||
NA | pCoo | misc_feature | 55862 | 240 | - | 0.458333 | |||
NA | pCoo | misc_feature | 23874 | 66 | + | 0.378788 | |||
NA | pCoo | misc_feature | 25438 | 66 | + | 0.560606 | |||
NA | pCoo | misc_feature | 62636 | 2270 | + | 0.540969 | |||
NA | pCoo094 | conserved hypothetical protein (fragment) | pCoo | pseudo | 73358 | 897 | + | 0.488294 | |
NA | pCoo | misc_feature | 85464 | 69 | - | 0.391304 | |||
NA | pCoo | misc_feature | 55976 | 66 | - | 0.409091 | |||
NA | pCoo | misc_feature | 17102 | 66 | - | 0.515152 | |||
NA | pCoo | repeat_unit | 73222 | 139 | + | 0.669065 | |||
NA | pCoo | repeat_unit | 81560 | 19 | + | 0.631579 | |||
NA | pCoo | misc_feature | 61985 | 66 | + | 0.575758 | |||
NA | pCoo | misc_feature | 12501 | 1080 | + | 0.387963 | |||
NA | pCoo017 | transposase insC for insertion element IS2 (pseudogene) | pCoo | pseudo | 60424 | 279 | - | 0.53405 | |
NA | pCoo | misc_feature | 72094 | 108 | - | 0.333333 | |||
NA | pCoo006 | IS element transposase (pseudogene) | pCoo | pseudo | 4165 | 999 | - | 0.47047 | |
NA | pCoo | misc_feature | 85661 | 375 | - | 0.445333 | |||
NA | pCoo | repeat_unit | 81533 | 19 | - | 0.631579 | |||
NA | pCoo | repeat_unit | 58470 | 28 | + | 0.464286 | |||
NA | pCoo | misc_feature | 84483 | 384 | - | 0.40625 | |||
NA | pCoo | repeat_unit | 19618 | 213 | + | 0.549296 | |||
NA | pCoo | misc_feature | 15492 | 540 | - | 0.512963 | |||
NA | pCoo | repeat_unit | 82066 | 19 | - | 0.631579 | |||
NA | pCoo | repeat_unit | 1961 | 371 | + | 0.568733 | |||
NA | pCoo | misc_feature | 54279 | 609 | - | 0.558292 | |||
NA | pCoo | misc_feature | 86258 | 393 | - | 0.455471 | |||
NA | pCoo | misc_feature | 16340 | 534 | - | 0.543071 | |||
NA | pCoo | misc_feature | 74425 | 396 | - | 0.608586 | |||
NA | pCoo | misc_feature | 32874 | 145 | - | 0.344828 | |||
NA | pCoo | misc_feature | 71194 | 135 | - | 0.37037 | |||
NA | pCoo | misc_feature | 84364 | 336 | - | 0.404762 | |||
NA | pCoo | misc_feature | 47755 | 306 | - | 0.493464 | |||
NA | pCoo | misc_feature | 24536 | 357 | + | 0.526611 | |||
NA | pCoo | misc_feature | 47380 | 66 | - | 0.530303 | |||
NA | pCoo | misc_feature | 87167 | 885 | - | 0.479096 | |||
NA | pCoo | repeat_unit | 31674 | 94 | + | 0.457447 | |||
NA | pCoo | misc_feature | 6841 | 720 | - | 0.465278 | |||
NA | pCoo042 | IS679 transposase (fragment) | pCoo | pseudo | 31674 | 54 | + | 0.518519 | |
NA | pCoo | misc_feature | 50147 | 972 | + | 0.457819 | |||
NA | pCoo | misc_feature | 21774 | 144 | - | 0.409722 | |||
NA | pCoo | repeat_unit | 37995 | 686 | + | 0.572886 | |||
NA | pCoo008 | IS629-family transposase (fragment) | pCoo | pseudo | 5903 | 102 | - | 0.509804 | |
NA | pCoo | misc_feature | 61056 | 678 | + | 0.485251 | |||
NA | pCoo | misc_feature | 25222 | 561 | + | 0.479501 | |||
NA | pCoo | repeat_unit | 6365 | 148 | + | 0.358108 | |||
NA | pCoo | misc_feature | 24996 | 69 | + | 0.434783 | |||
NA | pCoo | repeat_unit | 46905 | 17 | + | 0.0588235 | |||
NA | pCoo | misc_feature | 69292 | 714 | - | 0.495798 | |||
NA | pCoo | repeat_unit | 2787 | 55 | + | 0.545455 | |||
NA | pCoo | repeat_unit | 15351 | 1954 | + | 0.516888 | |||
NA | pCoo | misc_feature | 41592 | 132 | + | 0.348485 | |||
NA | pCoo | repeat_unit | 48392 | 23 | - | 0.434783 | |||
NA | pCoo | repeat_unit | 47667 | 23 | + | 0.478261 | |||
NA | pCoo | misc_feature | 17876 | 327 | + | 0.58104 | |||
NA | pCoo | repeat_unit | 36214 | 361 | + | 0.592798 | |||
NA | pCoo | repeat_region | 3767 | 1280 | + | 0.461719 | |||
NA | pCoo | misc_feature | 22910 | 381 | + | 0.393701 | |||
NA | pCoo | misc_feature | 17096 | 120 | - | 0.458333 | |||
NA | pCoo | misc_feature | 83693 | 69 | - | 0.565217 | |||
NA | pCoo | repeat_unit | 19743 | 94 | + | 0.5 | |||
NA | pCoo | misc_feature | 4477 | 183 | - | 0.442623 | |||
NA | pCoo | repeat_unit | 14268 | 33 | - | 0.363636 | |||
NA | pCoo | repeat_unit | 36557 | 139 | + | 0.676259 | |||
NA | pCoo | misc_feature | 56741 | 96 | + | 0.552083 | |||
NA | pCoo | repeat_region | 58285 | 180 | + | 0.466667 | |||
NA | pCoo | misc_feature | 40136 | 627 | - | 0.311005 | |||
NA | pCoo | repeat_unit | 5904 | 147 | - | 0.496599 | |||
NA | pCoo010 | integrase (pseudogene) | pCoo | pseudo | 6519 | 207 | - | 0.545894 | |
NA | pCoo | repeat_unit | 48392 | 768 | + | 0.520833 | |||
NA | pCoo | misc_feature | 90044 | 726 | - | 0.476584 | |||
NA | pCoo | repeat_unit | 49137 | 23 | + | 0.391304 | |||
NA | pCoo | repeat_unit | 17277 | 28 | - | 0.5 | |||
NA | pCoo | misc_feature | 5377 | 486 | + | 0.504115 | |||
NA | pCoo | repeat_unit | 58470 | 1954 | + | 0.516377 | |||
NA | pCoo | repeat_region | 61840 | 1312 | + | 0.538872 | |||
NA | pCoo | repeat_unit | 47690 | 17 | + | 0.0588235 | |||
NA | pCoo | misc_feature | 60215 | 120 | - | 0.458333 | |||
NA | pCoo | repeat_unit | 65396 | 26 | - | 0.615385 | |||
NA | pCoo | repeat_unit | 46922 | 768 | - | 0.527344 | |||
NA | pCoo | misc_feature | 73376 | 45 | + | 0.466667 | |||
NA | pCoo | misc_feature | 7786 | 246 | - | 0.369919 | |||
NA | pCoo | misc_feature | 95418 | 129 | - | 0.395349 | |||
NA | pCoo | misc_feature | 18639 | 597 | + | 0.58794 | |||
NA | pCoo | repeat_unit | 76121 | 686 | + | 0.591837 | |||
NA | pCoo | repeat_unit | 61840 | 26 | + | 0.576923 | |||
NA | pCoo | repeat_unit | 68357 | 23 | + | 0.391304 | |||
NA | pCoo | misc_feature | 76132 | 615 | + | 0.593496 | |||
NA | pCoo | misc_feature | 35306 | 480 | - | 0.379167 | |||
NA | pCoo | misc_feature | 48636 | 66 | + | 0.530303 | |||
NA | pCoo | repeat_unit | 65776 | 223 | + | 0.547085 | |||
NA | pCoo | misc_feature | 24915 | 285 | + | 0.484211 | |||
NA | pCoo | misc_feature | 41583 | 126 | + | 0.380952 | |||
NA | pCoo076 | IS element transposase (pseudogene) | pCoo | pseudo | 58359 | 111 | + | 0.468468 | |
NA | pCoo | repeat_unit | 72819 | 361 | + | 0.631579 | |||
NA | pCoo | misc_feature | 47566 | 24 | - | 0.625 | |||
NA | pCoo | misc_feature | 91615 | 94 | - | 0.510638 | |||
NA | pCoo | misc_feature | 25222 | 100 | + | 0.42 | |||
NA | pCoo | misc_feature | 39565 | 66 | + | 0.545455 | |||
NA | pCoo | misc_feature | 21422 | 129 | + | 0.356589 | |||
NA | pCoo | misc_feature | 97800 | 79 | - | 0.493671 | |||
NA | pCoo | misc_feature | 94278 | 123 | - | 0.341463 | |||
NA | pCoo | repeat_unit | 19805 | 26 | - | 0.538462 | |||
NA | pCoo026 | IS element transposase (fragment) | pCoo | pseudo | 21753 | 195 | - | 0.420513 | |
NA | pCoo | misc_feature | 4033 | 333 | - | 0.489489 | |||
NA | pCoo | repeat_unit | 60627 | 33 | + | 0.424242 | |||
NA | pCoo | misc_feature | 24635 | 198 | + | 0.530303 | |||
NA | pCoo041 | IS91 transposase (fragment) | pCoo | pseudo | 31462 | 219 | - | 0.538813 | |
NA | pCoo | misc_feature | 43767 | 2259 | - | 0.392652 | |||
NA | pCoo | stem_loop | 22713 | 18 | + | 0.277778 | |||
NA | pCoo | misc_feature | 95773 | 33 | - | 0.515152 | |||
NA | pCoo | misc_feature | 39031 | 27 | + | 0.481481 | |||
NA | pCoo | misc_feature | 48492 | 24 | + | 0.541667 | |||
NA | pCoo | misc_feature | 9877 | 70 | + | 0.428571 | |||
NA | pCoo | misc_feature | 34104 | 510 | - | 0.47451 | |||
NA | pCoo | repeat_unit | 82648 | 19 | - | 0.631579 | |||
NA | pCoo | misc_feature | 67684 | 261 | + | 0.521073 | |||
NA | pCoo | misc_feature | 41439 | 138 | + | 0.275362 | |||
NA | pCoo | repeat_unit | 56193 | 25 | - | 0.52 | |||
NA | pCoo103 | conserved hypothetical protein (fragment) | pCoo | pseudo | 80662 | 267 | + | 0.543071 | |
NA | pCoo | stem_loop | 22691 | 18 | + | 0.277778 | |||
NA | pCoo | misc_feature | 55368 | 327 | - | 0.535168 | |||
NA | pCoo | misc_feature | 68667 | 58 | + | 0.275862 | |||
NA | pCoo | repeat_unit | 56217 | 488 | + | 0.60041 | |||
NA | pCoo | repeat_unit | 68380 | 8 | + | 0.375 | |||
NA | pCoo | misc_feature | 38006 | 615 | + | 0.57561 | |||
NA | pCoo | repeat_region | 53684 | 2534 | - | 0.528808 | |||
NA | pCoo | misc_feature | 57867 | 150 | + | 0.54 | |||
NA | pCoo | misc_feature | 9280 | 67 | + | 0.41791 | |||
NA | pCoo | misc_feature | 83324 | 24 | - | 0.458333 | |||
NA | pCoo | misc_feature | 93136 | 91 | - | 0.43956 | |||
NA | pCoo | misc_feature | 30095 | 165 | + | 0.466667 | |||
NA | pCoo | misc_feature | 90857 | 243 | - | 0.493827 | |||
NA | pCoo | misc_feature | 42993 | 354 | - | 0.429379 | |||
NA | pCoo | misc_feature | 57870 | 69 | + | 0.507246 | |||
NA | pCoo | misc_feature | 30654 | 453 | + | 0.465784 | |||
NA | pCoo060 | IS element transposase (pseudogene) | pCoo | pseudo | 48179 | 207 | + | 0.400966 | |
NA | pCoo020 | IS element transposase (pseudogene) | pCoo | pseudo | 17307 | 555 | + | 0.538739 | |
NA | pCoo | misc_feature | 42075 | 825 | - | 0.44 | |||
NA | pCoo | misc_feature | 97524 | 66 | - | 0.530303 | |||
NA | pCoo | misc_feature | 86276 | 207 | - | 0.386473 | |||
NA | pCoo | misc_feature | 94274 | 79 | - | 0.278481 | |||
NA | pCoo | misc_feature | 12492 | 58 | + | 0.362069 | |||
NA | pCoo | repeat_unit | 53684 | 25 | + | 0.56 | |||
NA | pCoo | misc_feature | 32896 | 69 | - | 0.42029 | |||
NA | pCoo | repeat_unit | 58279 | 6 | + | ||||
NA | pCoo067 | conserved hypothetical protein (partial) | pCoo | pseudo | 53067 | 297 | + | 0.569024 | |
NA | pCoo | misc_feature | 39022 | 480 | + | 0.475 | |||
NA | pCoo | misc_feature | 37667 | 303 | + | 0.534653 | |||
NA | pCoo | misc_feature | 93776 | 126 | - | 0.373016 | |||
NA | pCoo | repeat_unit | 8469 | 148 | - | 0.358108 | |||
NA | pCoo083 | putative IS element transposase (partial) | pCoo | pseudo | 65778 | 114 | + | 0.570175 | |
NA | pCoo | misc_feature | 25255 | 69 | + | 0.434783 | |||
NA | pCoo | misc_feature | 84905 | 79 | - | 0.455696 | |||
NA | pCoo | misc_feature | 25775 | 522 | + | 0.555556 | |||
NA | pCoo | misc_feature | 32107 | 888 | - | 0.433559 | |||
NA | pCoo | repeat_unit | 29180 | 373 | + | 0.55496 | |||
NA | pCoo | repeat_unit | 60424 | 1314 | - | 0.531202 | |||
NA | pCoo | misc_feature | 6525 | 141 | - | 0.595745 | |||
NA | pCoo084 | transcriptional regulator (pseudogene) | pCoo | pseudo | 66793 | 432 | + | 0.277778 | |
NA | pCoo103 | conserved hypothetical protein (pseudogene) | pCoo | pseudo | 80925 | 315 | + | 0.653968 | |
NA | pCoo | repeat_unit | 60396 | 28 | - | 0.5 | |||
NA | pCoo | misc_feature | 87572 | 24 | - | 0.583333 | |||
NA | pCoo | repeat_region | 17305 | 2526 | + | 0.561362 | |||
NA | pCoo | misc_feature | 83890 | 318 | - | 0.430818 | |||
NA | pCoo | misc_feature | 78665 | 960 | + | 0.458333 | |||
NA | pCoo | misc_feature | 14319 | 498 | - | 0.554217 | |||
NA | pCoo | misc_feature | 30122 | 66 | + | 0.560606 | |||
NA | pCoo086 | IS1-family insertion element protein (pseudogene) | pCoo | pseudo | 67983 | 384 | + | 0.494792 | |
NA | pCoo | repeat_unit | 53678 | 6 | + | 0.5 | |||
NA | pCoo | misc_feature | 38360 | 66 | + | 0.575758 | |||
NA | pCoo | misc_feature | 83030 | 753 | - | 0.482072 | |||
NA | pCoo | repeat_unit | 58285 | 26 | + | 0.423077 | |||
NA | pCoo090 | putative IS element transposase (fragment) | pCoo | pseudo | 71772 | 237 | + | 0.493671 | |
NA | pCoo | misc_feature | 56842 | 492 | + | 0.609756 | |||
NA | pCoo | misc_feature | 2674 | 102 | + | 0.529412 | |||
NA | pCoo | repeat_unit | 15346 | 5 | + | 0.4 | |||
NA | pCoo027 | putative transglycosyloase (X polypeptide) (pseudogene) | pCoo | pseudo | 22316 | 420 | - | 0.42381 | |
NA | pCoo | misc_feature | 63535 | 768 | + | 0.542969 | |||
NA | pCoo079 | group II intron-encoded reverse transcriptase/maturase (pseudogene) | pCoo | pseudo | 60921 | 1203 | + | 0.482959 | |
NA | pCoo | misc_feature | 61904 | 261 | + | 0.555556 | |||
NA | pCoo | repeat_unit | 19965 | 488 | + | 0.60041 | |||
RNA-I | pCoo | misc_RNA | 27674 | 93 | - | 0.451613 | |||
insB | pCoo062 | insertion element IS1 protein InsB (pseudogene) | pCoo | pseudo | 48641 | 501 | + | 0.536926 | |
pilV' | pCoo106 | pilV alternative C-terminus (fragment) | pCoo | pseudo | 81820 | 264 | - | 0.488636 | |
pilV' | pCoo104 | pilV alternative C-terminus (fragment) | pCoo | pseudo | 81287 | 264 | - | 0.450758 | |
pilV' | pCoo107 | pilV alternative C-terminus (fragment) | pCoo | pseudo | 82094 | 222 | + | 0.495495 | |
pilV' | pCoo105 | pilV alternative C-terminus (fragment) | pCoo | pseudo | 81561 | 258 | + | 0.410853 | |
pilV' | pCoo109 | pilV alternative C-terminus (fragment) | pCoo | pseudo | 82695 | 300 | - | 0.42 | |
pilV' | pCoo108 | pilV alternative C-terminus (fragment) | pCoo | pseudo | 82312 | 354 | - | 0.446328 | |
psiA | pCoo072 | plasmid SOS inhibition protein (partial) | pCoo | pseudo | 56842 | 501 | + | 0.612774 | |
repA4 | pCoo037 | hypothetical protein RepA4 (pseudogene) | pCoo | pseudo | 29065 | 387 | + | 0.568475 | |
sat4 | pCoo012 | streptothricin acetyltransferase (pseudogene) | pCoo | pseudo | 7945 | 471 | - | 0.380042 | |
sok | pCoo | misc_RNA | 57751 | 65 | - | 0.461538 | |||
ssb | pCoo071 | single-strand binding protein (partial) | pCoo | pseudo | 56687 | 156 | + | 0.519231 | |
tnpA | pCoo057 | transposase for transposon gamma-delta (pseudogene) | pCoo | pseudo | 47911 | 384 | - | 0.455729 |