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2024-05-08 03:28:40

Gene list

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COG category: NOT ANALYZED
Organism: Pseudomonas syringae pv. tomato str. DC3000, DC3000

Number of genes found: 85

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA chromosome misc_feature5186668 291 - 0.501718
PHAGE02 Putative prophagechromosome misc_feature2252628 12369 + 0.575633
PHAGE03 Putative prophagechromosome misc_feature3824683 40670 + 0.570593
PHAGE04 Putative prophagechromosome misc_feature4445530 7927 + 0.577015
PHAGE05 Putative prophagechromosome misc_feature4515380 14994 + 0.577364
PHAGE06 Putative prophagechromosome misc_feature4543843 19650 + 0.579084
PYOCIN001 Putative bacteriocinchromosome misc_feature625118 22366 + 0.562997
Ps16SA 16S ribosomal RNAchromosome rRNA666741 1518 + 0.542819
Ps16SB 16S ribosomal RNAchromosome rRNA827555 1518 + 0.542819
Ps16SC 16S ribosomal RNAchromosome rRNA1072092 1518 + 0.542819
Ps16SD 16S ribosomal RNAchromosome rRNA3873151 1518 - 0.542819
Ps16SE 16S ribosomal RNAchromosome rRNA6217622 1518 - 0.542819
Ps23SA 23S ribosomal RNAchromosome rRNA668802 2903 + 0.521874
Ps23SB 23S ribosomal RNAchromosome rRNA829616 2903 + 0.521529
Ps23SC 23S ribosomal RNAchromosome rRNA1074153 2903 + 0.521529
Ps23SD 23S ribosomal RNAchromosome rRNA3869705 2903 - 0.521185
Ps23SE 23S ribosomal RNAchromosome rRNA6214176 2903 - 0.521185
Ps5SA 5S ribosomal RNAchromosome rRNA671852 120 + 0.491667
Ps5SB 5S ribosomal RNAchromosome rRNA832666 120 + 0.491667
Ps5SC 5S ribosomal RNAchromosome rRNA1077203 120 + 0.491667
Ps5SD 5S ribosomal RNAchromosome rRNA3869438 120 - 0.491667
Ps5SE 5S ribosomal RNAchromosome rRNA6213909 120 - 0.483333
tRNA-Ala-1 chromosome tRNA668483 76 + 0.671053
tRNA-Ala-2 chromosome tRNA829297 76 + 0.671053
tRNA-Ala-3 chromosome tRNA1073834 76 + 0.671053
tRNA-Ala-4 chromosome tRNA2384751 76 + 0.631579
tRNA-Ala-5 chromosome tRNA2385044 76 + 0.631579
tRNA-Ala-6 chromosome tRNA3872851 76 - 0.671053
tRNA-Ala-7 chromosome tRNA6217322 76 - 0.671053
tRNA-Arg-1 chromosome tRNA323982 77 - 0.623377
tRNA-Arg-2 chromosome tRNA2015010 77 + 0.571429
tRNA-Arg-3 chromosome tRNA2015174 77 + 0.571429
tRNA-Arg-4 chromosome tRNA2019304 77 + 0.571429
tRNA-Arg-5 chromosome tRNA4216534 77 - 0.636364
tRNA-Asn-1 chromosome tRNA898785 76 + 0.552632
tRNA-Asn-2 chromosome tRNA3657062 76 - 0.552632
tRNA-Asp-1 chromosome tRNA4316299 77 - 0.675325
tRNA-Asp-2 chromosome tRNA4316490 77 - 0.675325
tRNA-Asp-3 chromosome tRNA4408094 77 - 0.675325
tRNA-Cys-1 chromosome tRNA3351545 74 - 0.581081
tRNA-Gln-1 chromosome tRNA1219496 75 - 0.626667
tRNA-Glu-1 chromosome tRNA1956097 76 + 0.644737
tRNA-Glu-2 chromosome tRNA1956350 76 + 0.644737
tRNA-Glu-3 chromosome tRNA2384916 76 + 0.644737
tRNA-Glu-4 chromosome tRNA2385164 76 + 0.644737
tRNA-Gly-1 chromosome tRNA674500 74 + 0.554054
tRNA-Gly-2 chromosome tRNA1956175 76 + 0.605263
tRNA-Gly-3 chromosome tRNA1956430 76 + 0.605263
tRNA-Gly-4 chromosome tRNA3397753 76 - 0.605263
tRNA-Gly-5 chromosome tRNA4787411 74 + 0.513514
tRNA-His-1 chromosome tRNA4216407 76 - 0.605263
tRNA-Ile-1 chromosome tRNA668362 77 + 0.584416
tRNA-Ile-2 chromosome tRNA829176 77 + 0.584416
tRNA-Ile-3 chromosome tRNA1073713 77 + 0.584416
tRNA-Ile-4 chromosome tRNA3872971 77 - 0.584416
tRNA-Ile-5 chromosome tRNA6217442 77 - 0.584416
tRNA-Leu-1 chromosome tRNA1551777 85 - 0.552941
tRNA-Leu-2 chromosome tRNA3346191 86 + 0.616279
tRNA-Leu-3 chromosome tRNA4216266 85 - 0.564706
tRNA-Leu-4 chromosome tRNA5061463 86 - 0.581395
tRNA-Leu-5 chromosome tRNA5592964 87 + 0.563218
tRNA-Leu-6 chromosome tRNA5593211 87 + 0.563218
tRNA-Lys-1 chromosome tRNA898972 76 + 0.513158
tRNA-Lys-2 chromosome tRNA4476434 76 - 0.513158
tRNA-Met-1 chromosome tRNA586008 77 - 0.571429
tRNA-Met-2 chromosome tRNA1162588 77 - 0.519481
tRNA-Met-3 chromosome tRNA4498448 77 + 0.623377
tRNA-Met-4 chromosome tRNA4498716 77 + 0.623377
tRNA-Met-5 chromosome tRNA5061291 77 - 0.61039
tRNA-Phe-1 chromosome tRNA6074544 76 + 0.592105
tRNA-Pro-1 chromosome tRNA898890 77 + 0.623377
tRNA-Pro-2 chromosome tRNA899143 77 + 0.623377
tRNA-Pro-3 chromosome tRNA2634736 77 + 0.649351
tRNA-Ser-1 chromosome tRNA2014810 91 + 0.648352
tRNA-Ser-2 chromosome tRNA2266664 90 - 0.522222
tRNA-Ser-3 chromosome tRNA3771634 88 + 0.522727
tRNA-Ser-4 chromosome tRNA4458619 90 - 0.555556
tRNA-Thr-1 chromosome tRNA674600 76 + 0.552632
tRNA-Thr-2 chromosome tRNA6097142 76 + 0.565789
tRNA-Trp-1 chromosome tRNA674841 76 + 0.565789
tRNA-Tyr-1 chromosome tRNA674391 85 + 0.564706
tRNA-Val-1 chromosome tRNA2988034 77 + 0.571429
tRNA-Val-2 chromosome tRNA2988276 77 + 0.571429
tRNA-Val-3 chromosome tRNA4316635 76 - 0.618421
tRNA-Val-4 chromosome tRNA4408191 76 - 0.618421