Gene list
Applied filters:
COG category: NOT ANALYZED
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab
Number of genes found: 145
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| Show UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
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| Synechococcus sp. JA-3-3Ab, JA-3-3Ab | ||||||||
|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CYA_0599 | chromosome | pseudo | 610415 | 285 | - | 0.624561 | |
| NA | CYA_0067 | chromosome | pseudo | 64004 | 1324 | - | 0.596677 | |
| NA | CYA_2286 | chromosome | pseudo | 2291299 | 123 | + | 0.569106 | |
| NA | CYA_1345 | sRNA | chromosome | misc_RNA | 1355624 | 399 | + | 0.573935 |
| NA | CYA_0136 | chromosome | pseudo | 131131 | 273 | - | 0.611722 | |
| NA | CYA_2586 | chromosome | pseudo | 2609520 | 1280 | - | 0.592188 | |
| NA | CYA_1644 | chromosome | pseudo | 1643523 | 813 | + | 0.562116 | |
| NA | CYA_1648 | chromosome | pseudo | 1646050 | 231 | + | 0.584416 | |
| NA | CYA_0601 | chromosome | pseudo | 611112 | 742 | + | 0.588949 | |
| NA | CYA_2308 | tRNA-Ile | chromosome | tRNA | 2311966 | 74 | + | 0.594595 |
| NA | CYA_0670 | tRNA-Gly | chromosome | tRNA | 679734 | 72 | + | 0.597222 |
| NA | CYA_0509 | chromosome | pseudo | 525598 | 671 | + | 0.527571 | |
| NA | CYA_2847 | tRNA-Ser | chromosome | tRNA | 2863555 | 85 | - | 0.588235 |
| NA | CYA_2598 | chromosome | pseudo | 2617893 | 393 | - | 0.483461 | |
| NA | CYA_2490 | tRNA-OTHER | chromosome | pseudo | 2500377 | 87 | + | 0.586207 |
| NA | CYA_1596 | tRNA-Cys | chromosome | tRNA | 1607074 | 72 | + | 0.583333 |
| NA | CYA_0033 | tRNA-Met | chromosome | tRNA | 32386 | 73 | - | 0.547945 |
| NA | CYA_0963 | chromosome | pseudo | 975511 | 1268 | - | 0.524448 | |
| NA | CYA_2025 | chromosome | pseudo | 2042729 | 123 | - | 0.560976 | |
| NA | CYA_1191 | tRNA-Glu | chromosome | tRNA | 1205694 | 73 | - | 0.60274 |
| NA | CYA_1261 | chromosome | pseudo | 1276737 | 891 | + | 0.634119 | |
| NA | CYA_2024 | chromosome | pseudo | 2041487 | 1242 | - | 0.640902 | |
| NA | CYA_0629 | chromosome | pseudo | 640950 | 935 | + | 0.55508 | |
| NA | CYA_0168 | tRNA-Arg | chromosome | tRNA | 167006 | 78 | - | 0.628205 |
| NA | CYA_0071 | chromosome | pseudo | 67998 | 468 | - | 0.57265 | |
| NA | chromosome | repeat_region | 2557494 | 631 | - | 0.540412 | ||
| NA | CYA_1129 | chromosome | pseudo | 1154063 | 1364 | + | 0.597507 | |
| NA | CYA_1884 | tRNA-Asp | chromosome | tRNA | 1890240 | 74 | + | 0.648649 |
| NA | CYA_2426 | chromosome | pseudo | 2435425 | 952 | - | 0.588235 | |
| NA | CYA_1972 | tRNA-Pro | chromosome | tRNA | 1989763 | 74 | + | 0.608108 |
| NA | CYA_0451 | tRNA-Met | chromosome | tRNA | 470364 | 72 | + | 0.597222 |
| NA | CYA_0888 | chromosome | pseudo | 894635 | 251 | - | 0.581673 | |
| NA | CYA_2687 | chromosome | pseudo | 2702045 | 1452 | - | 0.57989 | |
| NA | CYA_0175 | chromosome | pseudo | 171491 | 2103 | - | 0.576795 | |
| NA | CYA_1865 | chromosome | pseudo | 1870909 | 363 | + | 0.482094 | |
| NA | CYA_2898 | tRNA-Thr | chromosome | tRNA | 2921547 | 72 | + | 0.625 |
| NA | CYA_1813 | chromosome | pseudo | 1817071 | 123 | + | 0.569106 | |
| NA | CYA_2610 | chromosome | pseudo | 2626509 | 492 | + | 0.577236 | |
| NA | CYA_1603 | chromosome | pseudo | 1611594 | 123 | - | 0.569106 | |
| NA | CYA_2641 | chromosome | pseudo | 2655267 | 498 | + | 0.616466 | |
| NA | CYA_2896 | tRNA-Tyr | chromosome | tRNA | 2921457 | 86 | + | 0.581395 |
| NA | CYA_0351 | tRNA-Gly | chromosome | tRNA | 369842 | 72 | - | 0.569444 |
| NA | chromosome | repeat_region | 889218 | 3117 | - | 0.525184 | ||
| NA | CYA_1017 | sRNA | chromosome | misc_RNA | 1035752 | 401 | - | 0.583541 |
| NA | CYA_0823 | tRNA-Arg | chromosome | tRNA | 837478 | 74 | + | 0.648649 |
| NA | CYA_1379 | chromosome | pseudo | 1387684 | 357 | - | 0.621849 | |
| NA | CYA_1708 | chromosome | pseudo | 1716591 | 981 | + | 0.521916 | |
| NA | CYA_1790 | tRNA-His | chromosome | tRNA | 1790745 | 73 | + | 0.616438 |
| NA | CYA_1207 | tRNA-Leu | chromosome | tRNA | 1217328 | 81 | + | 0.617284 |
| NA | CYA_1277 | chromosome | pseudo | 1289987 | 405 | - | 0.57037 | |
| NA | CYA_0980 | tRNA-Met | chromosome | tRNA | 994002 | 74 | - | 0.608108 |
| NA | CYA_1546 | chromosome | pseudo | 1555208 | 738 | - | 0.631436 | |
| NA | CYA_2698 | chromosome | pseudo | 2713695 | 393 | + | 0.480916 | |
| NA | CYA_2011 | chromosome | misc_feature | 2027283 | 606 | + | 0.457096 | |
| NA | CYA_1914 | chromosome | pseudo | 1922972 | 1301 | + | 0.591852 | |
| NA | CYA_1087 | tRNA-Ala | chromosome | tRNA | 1109696 | 76 | - | 0.605263 |
| NA | CYA_2745 | tRNA-Thr | chromosome | tRNA | 2766302 | 73 | + | 0.534247 |
| NA | CYA_2303 | tRNA-Val | chromosome | tRNA | 2305106 | 72 | + | 0.569444 |
| NA | CYA_2327 | chromosome | pseudo | 2330706 | 615 | - | 0.598374 | |
| NA | chromosome | repeat_region | 2327975 | 1227 | - | 0.508557 | ||
| NA | CYA_2209 | chromosome | pseudo | 2223876 | 736 | + | 0.612772 | |
| NA | CYA_2287 | tRNA-Val | chromosome | tRNA | 2291451 | 72 | - | 0.583333 |
| NA | CYA_1198 | tRNA-Ser | chromosome | tRNA | 1210512 | 91 | - | 0.604396 |
| NA | CYA_0501 | chromosome | pseudo | 517704 | 399 | + | 0.471178 | |
| NA | CYA_2268 | tRNA-Leu | chromosome | tRNA | 2277877 | 81 | - | 0.604938 |
| NA | CYA_2588 | chromosome | pseudo | 2611370 | 267 | - | 0.59176 | |
| NA | CYA_1422 | tRNA-Ala | chromosome | tRNA | 1430438 | 73 | - | 0.589041 |
| NA | CYA_1464 | tRNA-Ala | chromosome | tRNA | 1470167 | 73 | + | 0.547945 |
| NA | CYA_1014 | chromosome | pseudo | 1033276 | 612 | - | 0.550654 | |
| NA | CYA_0328 | chromosome | pseudo | 345511 | 935 | + | 0.557219 | |
| NA | CYA_0550 | chromosome | pseudo | 563736 | 1301 | + | 0.590315 | |
| NA | CYA_0141 | chromosome | pseudo | 136248 | 312 | - | 0.5 | |
| NA | CYA_1506 | chromosome | pseudo | 1512957 | 1421 | + | 0.631246 | |
| NA | CYA_2602 | chromosome | pseudo | 2620068 | 447 | - | 0.612975 | |
| NA | CYA_2490 | chromosome | pseudo | 2500377 | 87 | + | 0.586207 | |
| NA | CYA_1096 | chromosome | pseudo | 1117334 | 426 | + | 0.50939 | |
| NA | CYA_2609 | chromosome | pseudo | 2626939 | 123 | - | 0.569106 | |
| NA | chromosome | repeat_region | 2559271 | 185 | - | 0.545946 | ||
| NA | CYA_1757 | chromosome | pseudo | 1762664 | 982 | + | 0.566191 | |
| NA | CYA_2309 | tRNA-Ala | chromosome | tRNA | 2312076 | 76 | + | 0.605263 |
| NA | CYA_0250 | tRNA-Asn | chromosome | tRNA | 253975 | 72 | + | 0.583333 |
| NA | CYA_2475 | chromosome | pseudo | 2484572 | 1001 | - | 0.558442 | |
| NA | CYA_1018 | tRNA-Lys | chromosome | tRNA | 1036257 | 72 | + | 0.611111 |
| NA | CYA_1180 | chromosome | pseudo | 1195819 | 855 | + | 0.645614 | |
| NA | CYA_0751 | chromosome | pseudo | 757709 | 643 | + | 0.63297 | |
| NA | CYA_1314 | chromosome | pseudo | 1322989 | 3490 | - | 0.609456 | |
| NA | CYA_2763 | chromosome | pseudo | 2788542 | 870 | - | 0.604598 | |
| NA | CYA_1983 | chromosome | pseudo | 2003387 | 123 | + | 0.569106 | |
| NA | chromosome | repeat_region | 733183 | 524 | - | 0.648855 | ||
| NA | CYA_0886 | chromosome | pseudo | 892887 | 474 | - | 0.616034 | |
| NA | CYA_1352 | tRNA-Pro | chromosome | tRNA | 1363175 | 74 | + | 0.594595 |
| NA | CYA_2701 | chromosome | pseudo | 2716467 | 1957 | - | 0.656617 | |
| NA | CYA_2677 | tRNA-Gln | chromosome | tRNA | 2693023 | 72 | + | 0.625 |
| NA | CYA_1348 | tRNA-Arg | chromosome | tRNA | 1361661 | 76 | - | 0.552632 |
| NA | CYA_1516 | chromosome | pseudo | 1526161 | 849 | - | 0.540636 | |
| NA | CYA_2354 | chromosome | pseudo | 2361370 | 1295 | - | 0.595367 | |
| NA | CYA_1815 | tRNA-Leu | chromosome | tRNA | 1822297 | 87 | - | 0.54023 |
| NA | CYA_1874 | chromosome | pseudo | 1877278 | 504 | + | 0.549603 | |
| NA | CYA_1853 | tRNA-Leu | chromosome | tRNA | 1857612 | 84 | - | 0.547619 |
| NA | CYA_2840 | tRNA-Leu | chromosome | tRNA | 2858802 | 83 | - | 0.590361 |
| NA | CYA_1222 | chromosome | misc_feature | 1234909 | 363 | + | 0.614325 | |
| NA | CYA_0257 | chromosome | pseudo | 263551 | 490 | + | 0.514286 | |
| NA | CYA_2720 | chromosome | pseudo | 2738580 | 1301 | - | 0.586472 | |
| NA | CYA_1288 | chromosome | pseudo | 1297908 | 1416 | + | 0.628531 | |
| NA | CYA_0755 | tRNA-Leu | chromosome | tRNA | 760753 | 80 | + | 0.625 |
| NA | chromosome | repeat_region | 1139963 | 640 | - | 0.55 | ||
| NA | CYA_2397 | tRNA-Thr | chromosome | tRNA | 2409055 | 73 | - | 0.520548 |
| NA | CYA_0256 | chromosome | pseudo | 262295 | 1301 | - | 0.582629 | |
| NA | CYA_1330 | tRNA-Phe | chromosome | tRNA | 1345120 | 73 | - | 0.547945 |
| NA | CYA_1036 | chromosome | pseudo | 1053970 | 1103 | + | 0.582049 | |
| NA | CYA_2723 | chromosome | misc_feature | 2740383 | 606 | + | 0.457096 | |
| NA | CYA_1635 | chromosome | pseudo | 1636509 | 364 | + | 0.651099 | |
| NA | CYA_2220 | chromosome | pseudo | 2235978 | 1301 | - | 0.582629 | |
| NA | CYA_1618 | tRNA-Trp | chromosome | tRNA | 1622360 | 76 | - | 0.578947 |
| NA | CYA_1088 | tRNA-Ile | chromosome | tRNA | 1109808 | 74 | - | 0.594595 |
| NA | CYA_0191 | chromosome | pseudo | 189921 | 622 | + | 0.617363 | |
| NA | CYA_1410 | tRNA-Val | chromosome | tRNA | 1415958 | 72 | + | 0.625 |
| NA | CYA_1320 | chromosome | pseudo | 1335692 | 216 | + | 0.439815 | |
| NA | CYA_2188 | chromosome | misc_feature | 2208598 | 126 | - | 0.603175 | |
| NA | CYA_0674 | chromosome | misc_feature | 682527 | 162 | - | 0.635802 | |
| NA | CYA_0786 | chromosome | pseudo | 794301 | 932 | - | 0.551502 | |
| NA | CYA_2770 | tRNA-Gly | chromosome | tRNA | 2792396 | 71 | - | 0.535211 |
| NA | CYA_1357 | chromosome | pseudo | 1367537 | 225 | + | 0.426667 | |
| NA | CYA_0276 | chromosome | pseudo | 281997 | 1052 | + | 0.534221 | |
| NA | CYA_0884 | chromosome | pseudo | 888957 | 123 | - | 0.569106 | |
| NA | CYA_2416 | chromosome | pseudo | 2426644 | 1301 | + | 0.580323 | |
| NA | CYA_2244 | tRNA-Ser | chromosome | tRNA | 2255503 | 88 | - | 0.602273 |
| NA | chromosome | repeat_region | 1260140 | 491 | + | 0.543788 | ||
| NA | CYA_0655 | tRNA-Arg | chromosome | tRNA | 664036 | 74 | + | 0.621622 |
| NA | CYA_2404 | chromosome | pseudo | 2413371 | 1114 | + | 0.622083 | |
| NA | CYA_1344 | tRNA-Lys | chromosome | tRNA | 1355452 | 72 | - | 0.611111 |
| NA | CYA_1952 | tRNA-Ser | chromosome | tRNA | 1964028 | 88 | + | 0.568182 |
| NA | CYA_1637 | tRNA-Pro | chromosome | tRNA | 1638093 | 74 | - | 0.608108 |
| NA | CYA_0611 | chromosome | pseudo | 619312 | 123 | - | 0.569106 | |
| NA | CYA_0608 | chromosome | pseudo | 616162 | 657 | - | 0.651446 | |
| NA | CYA_0970 | chromosome | pseudo | 981592 | 935 | + | 0.545455 | |
| cas1-2 | CYA_2540 | chromosome | pseudo | 2559985 | 990 | - | 0.524242 | |
| prfB | CYA_1248 | chromosome | pseudo | 1261707 | 1129 | - | 0.610275 | |
| prfC | CYA_0817 | chromosome | pseudo | 827792 | 1644 | + | 0.548054 | |
| rrfA | CYA_1085 | 5S ribosomal RNA | chromosome | rRNA | 1106587 | 120 | - | 0.633333 |
| rrfB | CYA_2311 | 5S ribosomal RNA | chromosome | rRNA | 2315141 | 120 | + | 0.633333 |
| rrlA | CYA_1086 | 23S ribosomal RNA | chromosome | rRNA | 1106765 | 2807 | - | 0.57606 |
| rrlB | CYA_2310 | 23S ribosomal RNA | chromosome | rRNA | 2312276 | 2807 | + | 0.57606 |
| rrsA | CYA_1089 | 16S ribosomal RNA | chromosome | rRNA | 1110127 | 1324 | - | 0.587613 |
| rrsB | CYA_2307 | 16S ribosomal RNA | chromosome | rRNA | 2310397 | 1324 | + | 0.587613 |
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