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2024-05-06 12:55:28

Gene list

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COG category: NOT ANALYZED
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 329

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_CH02807 chromosome pseudo2923813 1128 + 0.664007
NA chromosome promoter1261516 31 - 0.612903
NA chromosome promoter899337 31 + 0.516129
NA chromosome protein_bind2469177 47 - 0.319149
NA RHE_CH02649 chromosome protein_bind2763283 10 + 0.4
NA RHE_CH01155 chromosome pseudo1207450 663 - 0.648567
NA RHE_CH01101 chromosome pseudo1149761 1734 + 0.656286
NA RHE_CH02522 chromosome pseudo2632711 1413 + 0.593064
NA chromosome promoter273399 31 + 0.451613
NA chromosome protein_bind2448287 10 - 0.5
NA p42f protein_bind436879 10 + 0.5
NA chromosome promoter55941 31 + 0.645161
NA chromosome promoter4162258 31 - 0.290323
NA p42f promoter369125 31 + 0.774194
NA chromosome promoter2666507 31 - 0.516129
NA RHE_CH00065 chromosome pseudo68966 1551 - 0.611219
NA chromosome promoter859002 31 - 0.516129
NA chromosome promoter64374 31 + 0.516129
NA RHE_CH00787 tRNA-Glnchromosome tRNA825147 74 - 0.527027
NA RHE_CH00730 chromosome pseudo767784 360 - 0.583333
NA chromosome promoter3504389 31 + 0.451613
NA chromosome promoter917142 31 - 0.548387
NA chromosome promoter1380952 31 - 0.709677
NA chromosome promoter3361362 31 + 0.612903
NA RHE_CH01101 chromosome pseudo1149761 1734 + 0.656286
NA chromosome promoter351265 31 + 0.451613
NA RHE_CH03748 23S ribosomal RNAchromosome rRNA3969298 2877 - 0.534932
NA RHE_PF00219 p42f pseudo232811 384 - 0.583333
NA RHE_CH03747 5S ribosomal RNAchromosome rRNA3968982 119 - 0.630252
NA RHE_CH01339 chromosome pseudo1394687 1515 + 0.635644
NA RHE_CH00015 chromosome pseudo11866 954 + 0.585954
NA RHE_CH03402 tRNA-Ilechromosome tRNA3576038 77 - 0.597403
NA p42f protein_bind179355 10 - 0.4
NA RHE_CH03749 tRNA-Alachromosome tRNA3972839 76 - 0.644737
NA chromosome protein_bind1139892 10 + 0.4
NA chromosome promoter549477 31 - 0.483871
NA chromosome promoter1180082 31 - 0.451613
NA chromosome promoter16812 31 + 0.483871
NA chromosome promoter1640580 31 - 0.580645
NA RHE_CH00501 chromosome pseudo518869 411 + 0.591241
NA chromosome promoter2533086 31 + 0.612903
NA RHE_CH03777 tRNA-Leuchromosome tRNA4006536 85 + 0.576471
NA chromosome promoter2532156 31 + 0.451613
NA chromosome protein_bind3395066 10 + 0.4
NA chromosome promoter2468196 31 - 0.645161
NA chromosome promoter1199110 31 + 0.290323
NA chromosome promoter1667255 31 - 0.645161
NA chromosome promoter351214 31 - 0.548387
NA RHE_CH01601 tRNA-Aspchromosome tRNA1682753 77 + 0.701299
NA RHE_CH00525 tRNA-Glychromosome tRNA542310 74 + 0.567568
NA RHE_CH02515 chromosome pseudo2627765 516 - 0.585271
NA RHE_CH01856 chromosome pseudo1942948 834 + 0.622302
NA chromosome promoter2090789 31 - 0.516129
NA RHE_CH01881 tRNA-Gluchromosome tRNA1966227 75 - 0.533333
NA RHE_CH03451 tRNA-Metchromosome tRNA3634872 77 - 0.545455
NA chromosome promoter1210556 31 - 0.709677
NA RHE_CH03854 chromosome pseudo4084388 693 - 0.640693
NA RHE_CH02522 chromosome pseudo2632711 1413 + 0.593064
NA chromosome promoter1834362 31 - 0.548387
NA p42f protein_bind557182 10 + 0.6
NA chromosome promoter1899642 31 + 0.451613
NA chromosome protein_bind1981630 10 + 0.4
NA chromosome promoter555176 31 - 0.806452
NA RHE_CH00786 chromosome pseudo824708 267 + 0.640449
NA RHE_CH02719 tRNA-Lyschromosome tRNA2832313 76 - 0.539474
NA chromosome promoter1243037 31 + 0.483871
NA p42f protein_bind342971 10 + 0.6
NA RHE_CH03923 chromosome pseudo4153170 951 + 0.599369
NA chromosome protein_bind948232 10 + 0.4
NA chromosome promoter1136418 31 + 0.645161
NA RHE_CH03401 tRNA-Alachromosome tRNA3575878 76 - 0.644737
NA chromosome protein_bind2635497 10 - 0.4
NA chromosome promoter1905423 31 + 0.580645
NA RHE_CH00577 tRNA-Thrchromosome tRNA601642 75 - 0.6
NA chromosome promoter4196779 31 - 0.483871
NA chromosome promoter4052819 31 + 0.387097
NA RHE_CH01880 tRNA-Gluchromosome tRNA1965978 75 - 0.573333
NA RHE_CH02409 chromosome pseudo2520309 1152 - 0.575521
NA p42f promoter374113 31 + 0.580645
NA RHE_CH02409 chromosome pseudo2520309 1152 - 0.575521
NA chromosome promoter2109849 31 - 0.709677
NA chromosome promoter306517 31 - 0.677419
NA chromosome promoter1777379 31 + 0.612903
NA chromosome promoter3452445 31 + 0.645161
NA p42f promoter188196 31 + 0.580645
NA chromosome promoter1352134 31 + 0.548387
NA RHE_CH03923 chromosome pseudo4153170 951 + 0.599369
NA chromosome promoter4201715 31 - 0.451613
NA chromosome promoter433883 31 + 0.451613
NA RHE_CH02222 tRNA-Leuchromosome tRNA2325590 85 - 0.635294
NA RHE_CH01965 tRNA-Lyschromosome tRNA2049580 76 + 0.552632
NA RHE_CH03319 chromosome pseudo3482586 3450 + 0.627246
NA chromosome protein_bind2437673 10 - 0.5
NA RHE_CH01339 chromosome pseudo1394687 1515 + 0.635644
NA chromosome promoter1106740 31 + 0.548387
NA p42f promoter516 31 + 0.677419
NA RHE_CH01887 tRNA-Prochromosome tRNA1969657 77 - 0.597403
NA RHE_CH01059 chromosome pseudo1110565 255 - 0.580392
NA RHE_PF00549 p42f pseudo613080 1542 - 0.603113
NA RHE_CH03576 tRNA-Valchromosome tRNA3770456 75 + 0.6
NA RHE_CH00786 chromosome pseudo824708 267 + 0.640449
NA chromosome promoter3933560 31 + 0.612903
NA RHE_CH02545 chromosome pseudo2654509 624 + 0.652244
NA RHE_CH02759 chromosome pseudo2874405 1974 - 0.637791
NA chromosome protein_bind1674093 10 + 0.4
NA chromosome protein_bind315160 10 - 0.4
NA chromosome promoter4135761 31 + 0.516129
NA chromosome promoter1175138 31 - 0.709677
NA p42f protein_bind152451 10 - 0.4
NA p42f protein_bind273900 10 - 0.5
NA chromosome promoter2393535 31 - 0.516129
NA RHE_CH01348 tRNA-Serchromosome tRNA1407323 91 + 0.582418
NA p42f promoter492757 31 - 0.612903
NA RHE_CH01155 chromosome pseudo1207450 663 - 0.648567
NA RHE_CH01889 tRNA-Argchromosome tRNA1970730 77 + 0.597403
NA RHE_CH02183 chromosome pseudo2288429 1107 + 0.654923
NA RHE_CH01600 tRNA-Aspchromosome tRNA1682625 77 + 0.701299
NA chromosome promoter1405777 31 + 0.612903
NA p42f protein_bind65899 10 - 0.5
NA RHE_PF00066 p42f pseudo66095 468 + 0.589744
NA p42f promoter499367 31 + 0.451613
NA chromosome protein_bind3995783 10 - 0.5
NA RHE_PF00491 p42f pseudo555400 792 - 0.694444
NA chromosome promoter751882 31 - 0.483871
NA RHE_CH03400 23S ribosomal RNAchromosome rRNA3572337 2877 - 0.534932
NA chromosome protein_bind864480 10 - 0.5
NA RHE_CH01804 tRNA-Asnchromosome tRNA1890339 75 - 0.613333
NA chromosome protein_bind2119263 10 + 0.4
NA chromosome promoter3554829 31 - 0.612903
NA p42f promoter32256 31 - 0.774194
NA RHE_CH00722 tRNA-Hischromosome tRNA752635 77 + 0.597403
NA RHE_CH02581 chromosome pseudo2691039 1242 - 0.609501
NA RHE_CH00060 tRNA-Ilechromosome tRNA64312 77 + 0.597403
NA RHE_CH01841 tRNA-Leuchromosome tRNA1928519 85 + 0.552941
NA chromosome promoter3327977 31 + 0.354839
NA chromosome protein_bind1851309 47 + 0.425532
NA chromosome promoter3045701 31 - 0.548387
NA RHE_CH00587 tRNA-Phechromosome tRNA607869 76 + 0.605263
NA RHE_PF00124 p42f pseudo131852 243 + 0.559671
NA chromosome promoter3111610 31 - 0.677419
NA RHE_CH02918 tRNA-Metchromosome tRNA3051846 76 + 0.644737
NA RHE_CH03077 chromosome pseudo3220413 777 + 0.640927
NA chromosome protein_bind3350489 47 + 0.425532
NA chromosome promoter2327487 31 + 0.451613
NA chromosome protein_bind394982 10 - 0.4
NA RHE_PF00037 p42f protein_bind38525 10 - 0.5
NA chromosome promoter1352002 31 - 0.516129
NA chromosome promoter1505620 31 + 0.83871
NA RHE_CH02164 tRNA-Serchromosome tRNA2270497 90 + 0.577778
NA chromosome promoter2126193 31 + 0.451613
NA RHE_CH02183 chromosome pseudo2288429 1107 + 0.654923
NA RHE_CH03834 tRNA-Argchromosome tRNA4058204 77 + 0.597403
NA RHE_CH00784 chromosome pseudo822426 999 + 0.614615
NA RHE_CH01656 tRNA-Tyrchromosome tRNA1747046 85 + 0.529412
NA RHE_CH00784 chromosome pseudo822426 999 + 0.614615
NA RHE_CH02019 chromosome pseudo2111890 525 + 0.569524
NA chromosome protein_bind1156937 10 + 0.5
NA chromosome promoter1744023 31 + 0.580645
NA RHE_CH01652 tRNA-Thrchromosome tRNA1744080 76 + 0.605263
NA chromosome promoter3995731 31 - 0.612903
NA RHE_CH02639 chromosome pseudo2751448 918 + 0.637255
NA RHE_CH00100 tRNA-Alachromosome tRNA111183 76 + 0.605263
NA p42f promoter203360 31 - 0.645161
NA chromosome promoter72395 31 + 0.258065
NA RHE_CH01152 chromosome pseudo1204224 897 - 0.629877
NA chromosome promoter681448 31 + 0.677419
NA p42f protein_bind263126 10 - 0.3
NA chromosome promoter4135734 31 + 0.483871
NA chromosome promoter1289240 31 + 0.677419
NA RHE_CH02408 chromosome pseudo2518457 1695 - 0.6
NA chromosome promoter1335367 31 + 0.548387
NA RHE_CH01657 tRNA-Glychromosome tRNA1747155 74 + 0.581081
NA chromosome promoter1594822 31 + 0.548387
NA RHE_CH00185 tRNA-Serchromosome tRNA200136 90 - 0.622222
NA chromosome promoter4223182 31 + 0.419355
NA p42f protein_bind343044 10 + 0.3
NA chromosome promoter965287 31 - 0.548387
NA p42f promoter480895 31 - 0.516129
NA RHE_CH03399 5S ribosomal RNAchromosome rRNA3572021 119 - 0.630252
NA p42f protein_bind473949 10 + 0.3
NA RHE_CH00286 chromosome pseudo295626 348 - 0.586207
NA chromosome promoter4199745 31 - 0.645161
NA chromosome promoter2423800 31 - 0.451613
NA RHE_CH00059 16S Ribosomal RNAchromosome rRNA62590 1509 + 0.557323
NA chromosome promoter2475936 31 + 0.645161
NA RHE_CH01856 chromosome pseudo1942948 834 + 0.622302
NA RHE_CH00442 tRNA-Argchromosome tRNA456284 77 + 0.584416
NA chromosome promoter2049457 31 - 0.645161
NA chromosome promoter3473110 31 - 0.548387
NA RHE_CH03403 16S Ribosomal RNAchromosome rRNA3576324 1513 - 0.557171
NA chromosome protein_bind3131576 47 - 0.255319
NA RHE_CH03077 chromosome pseudo3220413 777 + 0.640927
NA chromosome protein_bind1748948 10 + 0.5
NA RHE_CH00061 tRNA-Alachromosome tRNA64473 76 + 0.644737
NA RHE_PF00491 p42f pseudo555400 792 - 0.694444
NA chromosome promoter4196819 31 - 0.612903
NA RHE_CH03981 tRNA-Glychromosome tRNA4206815 75 + 0.626667
NA RHE_CH03319 chromosome pseudo3482586 3450 + 0.627246
NA chromosome promoter2820742 31 - 0.709677
NA p42f protein_bind16037 10 - 0.5
NA chromosome promoter3079842 31 - 0.580645
NA p42f protein_bind282911 10 - 0.3
NA chromosome promoter449561 31 - 0.548387
NA chromosome promoter1996694 31 + 0.741935
NA chromosome promoter1785147 31 - 0.387097
NA RHE_CH04061 tRNA-Serchromosome tRNA4306772 90 - 0.588889
NA RHE_CH03750 tRNA-Ilechromosome tRNA3972999 77 - 0.597403
NA chromosome promoter3576022 31 - 0.516129
NA RHE_CH01547 tRNA-Prochromosome tRNA1627025 77 + 0.701299
NA chromosome promoter3473971 31 - 0.548387
NA chromosome promoter1662697 31 + 0.419355
NA RHE_PF00124 p42f pseudo131852 243 + 0.559671
NA RHE_CH00284 chromosome protein_bind294403 10 - 0.4
NA RHE_CH02149 chromosome pseudo2253847 1038 - 0.612717
NA chromosome protein_bind2484409 47 - 0.446809
NA chromosome protein_bind1472985 10 + 0.4
NA chromosome promoter2896433 31 - 0.677419
NA chromosome promoter2504710 31 + 0.645161
NA RHE_CH01660 tRNA-Trpchromosome tRNA1750308 76 + 0.644737
NA chromosome protein_bind3688335 47 + 0.297872
NA RHE_CH00062 23S ribosomal RNAchromosome rRNA65213 2877 + 0.534932
NA chromosome promoter4287389 31 + 0.612903
NA chromosome promoter1640489 31 - 0.483871
NA chromosome promoter1210593 31 + 0.548387
NA chromosome promoter2027762 31 + 0.387097
NA chromosome promoter1351942 31 - 0.548387
NA chromosome promoter3250418 31 + 0.548387
NA RHE_PF00325 p42f protein_bind367215 10 - 0.5
NA RHE_CH03746 tRNA-Metchromosome tRNA3968813 77 - 0.649351
NA chromosome promoter690860 31 + 0.612903
NA RHE_CH00504 tRNA-Thrchromosome tRNA521396 76 - 0.539474
NA chromosome promoter3377615 31 + 0.387097
NA RHE_CH01808 tRNA-Cyschromosome tRNA1892266 74 + 0.635135
NA RHE_CH02436 chromosome pseudo2546285 855 - 0.597661
NA RHE_CH01014 tRNA-Glnchromosome tRNA1064583 75 + 0.64
NA chromosome promoter921110 31 + 0.741935
NA chromosome promoter2202597 31 - 0.451613
NA chromosome promoter3474806 31 - 0.548387
NA chromosome promoter2666435 31 - 0.645161
NA RHE_CH00286 chromosome pseudo295626 348 - 0.586207
NA chromosome promoter556485 31 - 0.580645
NA RHE_CH01026 tRNA-Prochromosome tRNA1080635 77 + 0.623377
NA chromosome promoter1585272 31 + 0.612903
NA p42f protein_bind122169 10 - 0.5
NA RHE_CH00065 chromosome pseudo68966 1551 - 0.611219
NA RHE_CH02408 chromosome pseudo2518457 1695 - 0.6
NA RHE_PF00219 p42f pseudo232811 384 - 0.583333
NA RHE_CH00501 chromosome pseudo518869 411 + 0.591241
NA p42f protein_bind482257 10 + 0.5
NA chromosome promoter321241 31 - 0.483871
NA chromosome promoter3846485 31 - 0.580645
NA chromosome promoter2023744 31 + 0.612903
NA RHE_PF00066 p42f pseudo66095 468 + 0.589744
NA chromosome promoter1120361 31 - 0.548387
NA p42f promoter172359 31 - 0.580645
NA RHE_CH02759 chromosome pseudo2874405 1974 - 0.637791
NA chromosome promoter1373586 31 + 0.677419
NA chromosome promoter4186108 31 + 0.516129
NA RHE_CH02436 chromosome pseudo2546285 855 - 0.597661
NA chromosome promoter1668964 31 + 0.548387
NA p42f protein_bind526673 10 - 0.4
NA chromosome protein_bind426393 10 - 0.5
NA chromosome promoter4193687 31 + 0.741935
NA chromosome promoter2310623 31 + 0.483871
NA chromosome promoter2628279 31 - 0.451613
NA chromosome promoter1903621 31 + 0.548387
NA chromosome promoter810212 31 + 0.516129
NA RHE_CH00064 tRNA-Metchromosome tRNA68498 77 + 0.649351
NA chromosome promoter2469210 31 - 0.354839
NA chromosome promoter2293911 31 - 0.741935
NA chromosome promoter3111598 31 - 0.580645
NA p42f promoter526554 31 + 0.645161
NA RHE_CH01599 tRNA-Valchromosome tRNA1682135 76 - 0.578947
NA RHE_CH03848 chromosome protein_bind4074117 10 + 0.4
NA RHE_CH02581 chromosome pseudo2691039 1242 - 0.609501
NA RHE_PF00549 p42f pseudo613080 1542 - 0.603113
NA chromosome promoter2275219 31 - 0.612903
NA RHE_CH00015 chromosome pseudo11866 954 + 0.585954
NA chromosome promoter2304779 31 - 0.580645
NA chromosome promoter3972983 31 - 0.516129
NA RHE_CH02515 chromosome pseudo2627765 516 - 0.585271
NA chromosome promoter3646478 31 - 0.645161
NA RHE_CH01882 tRNA-Gluchromosome tRNA1966377 75 - 0.573333
NA chromosome promoter1926473 31 + 0.516129
NA p42f promoter508472 31 + 0.548387
NA RHE_CH00242 tRNA-Leuchromosome tRNA257742 85 - 0.623529
NA RHE_CH04082 chromosome protein_bind4324496 10 - 0.5
NA p42f protein_bind530734 10 - 0.4
NA RHE_CH02149 chromosome pseudo2253847 1038 - 0.612717
NA RHE_CH02807 chromosome pseudo2923813 1128 + 0.664007
NA chromosome promoter4049919 31 - 0.580645
NA RHE_PF00121 p42f pseudo128405 675 + 0.654815
NA RHE_CH01152 chromosome pseudo1204224 897 - 0.629877
NA RHE_CH03854 chromosome pseudo4084388 693 - 0.640693
NA RHE_CH03175 tRNA-Argchromosome tRNA3334716 77 + 0.558442
NA RHE_PF00131 p42f protein_bind138903 10 + 0.5
NA RHE_CH02545 chromosome pseudo2654509 624 + 0.652244
NA p42f promoter63865 31 + 0.516129
NA RHE_CH02639 chromosome pseudo2751448 918 + 0.637255
NA RHE_PF00121 p42f pseudo128405 675 + 0.654815
NA RHE_CH00900 chromosome protein_bind947739 10 - 0.5
NA chromosome promoter3896004 31 - 0.548387
NA chromosome promoter1041471 31 + 0.580645
NA chromosome promoter1751348 31 + 0.612903
NA chromosome promoter253206 31 + 0.709677
NA RHE_CH01059 chromosome pseudo1110565 255 - 0.580392
NA chromosome protein_bind1651868 10 - 0.4
NA chromosome protein_bind351006 10 - 0.4
NA chromosome promoter4208474 31 - 0.612903
NA RHE_CH00063 5S ribosomal RNAchromosome rRNA68287 119 + 0.630252
NA chromosome protein_bind4012328 10 + 0.4
NA RHE_CH03751 16S Ribosomal RNAchromosome rRNA3973285 1513 - 0.557171
NA RHE_CH03398 tRNA-Metchromosome tRNA3571852 77 - 0.649351
NA RHE_PF00529 p42f protein_bind594316 10 + 0.5
NA RHE_CH03942 chromosome protein_bind4170905 10 - 0.4
NA p42f promoter373998 31 - 0.580645
NA RHE_CH02019 chromosome pseudo2111890 525 + 0.569524
NA RHE_CH00730 chromosome pseudo767784 360 - 0.583333
NA chromosome promoter2027805 31 + 0.322581
argG1 RHE_CH02588 chromosome pseudo2698032 1680 + 0.605952
argG1 RHE_CH02588 chromosome pseudo2698032 1680 + 0.605952
corAf RHE_PF00281 p42f protein_bind311215 10 - 0.5
fliF RHE_CH00646 chromosome protein_bind666956 47 + 0.276596
kdsB1 RHE_CH00132 chromosome protein_bind142571 10 - 0.4
noeK RHE_CH03243 chromosome protein_bind3411656 10 + 0.4
norC RHE_PF00515 p42f protein_bind580442 10 + 0.5
pssU RHE_CH03211 chromosome pseudo3373375 468 + 0.521368
pssU RHE_CH03211 chromosome pseudo3373375 468 + 0.521368
rplX RHE_CH01686 chromosome protein_bind1773965 10 + 0.5