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2024-05-05 17:43:19

Gene list

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COG category: NOT ANALYZED
Organism: Shewanella oneidensis MR-1, MR-1

Number of genes found: 129

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
Sp16SA 16S ribosomal RNAchromosome rRNA269814 1529 + 0.548071
Sp16SB 16S ribosomal RNAchromosome rRNA216788 1529 + 0.548071
Sp16SC 16S ribosomal RNAchromosome rRNA46116 1529 + 0.547417
Sp16SD 16S ribosomal RNAchromosome rRNA4945901 1529 - 0.547417
Sp16SE 16S ribosomal RNAchromosome rRNA4691979 1529 - 0.548071
Sp16SF 16S ribosomal RNAchromosome rRNA4682869 1529 - 0.548071
Sp16SG 16S ribosomal RNAchromosome rRNA4380831 1529 - 0.547417
Sp16SH 16S ribosomal RNAchromosome rRNA3738378 1529 - 0.549379
Sp16SI 16S ribosomal RNAchromosome rRNA2973049 1529 - 0.548071
Sp23SA 23S ribosomal RNAchromosome rRNA271658 2894 + 0.514167
Sp23SB 23S ribosomal RNAchromosome rRNA218957 2893 + 0.515382
Sp23SC 23S ribosomal RNAchromosome rRNA47961 2893 + 0.515036
Sp23SD 23S ribosomal RNAchromosome rRNA4942692 2893 - 0.515036
Sp23SE 23S ribosomal RNAchromosome rRNA4688770 2893 - 0.515382
Sp23SF 23S ribosomal RNAchromosome rRNA4679660 2893 - 0.515382
Sp23SG 23S ribosomal RNAchromosome rRNA4377298 2893 - 0.515728
Sp23SH 23S ribosomal RNAchromosome rRNA3735169 2893 - 0.514691
Sp23SI 23S ribosomal RNAchromosome rRNA2969516 2893 - 0.515382
Sp5SA 5S ribosomal RNAchromosome rRNA274755 120 + 0.558333
Sp5SB 5S ribosomal RNAchromosome rRNA222053 120 + 0.558333
Sp5SC 5S ribosomal RNAchromosome rRNA51057 120 + 0.558333
Sp5SD 5S ribosomal RNAchromosome rRNA4942369 120 - 0.558333
Sp5SE 5S ribosomal RNAchromosome rRNA4688447 120 - 0.558333
Sp5SF 5S ribosomal RNAchromosome rRNA4679082 120 - 0.55
Sp5SG 5S ribosomal RNAchromosome rRNA4376975 120 - 0.558333
Sp5SH 5S ribosomal RNAchromosome rRNA3734846 120 - 0.558333
Sp5SI 5S ribosomal RNAchromosome rRNA2969193 120 - 0.558333
tRNA-Ala-1 chromosome tRNA218607 76 + 0.644737
tRNA-Ala-2 chromosome tRNA4380465 76 - 0.644737
tRNA-Ala-3 chromosome tRNA3259601 76 - 0.605263
tRNA-Ala-4 chromosome tRNA3259276 76 - 0.605263
tRNA-Ala-5 chromosome tRNA2972683 76 - 0.644737
tRNA-Arg-1 chromosome tRNA1880184 77 + 0.636364
tRNA-Arg-2 chromosome tRNA4512352 77 - 0.636364
tRNA-Arg-3 chromosome tRNA3567777 77 - 0.61039
tRNA-Arg-4 chromosome tRNA3567669 77 - 0.597403
tRNA-Arg-5 chromosome tRNA3567509 77 - 0.61039
tRNA-Arg-6 chromosome tRNA3567389 77 - 0.597403
tRNA-Arg-7 chromosome tRNA3567269 77 - 0.623377
tRNA-Arg-8 chromosome tRNA3566969 77 - 0.61039
tRNA-Arg-9 chromosome tRNA3395143 76 + 0.592105
tRNA-Asn-1 chromosome tRNA2633320 76 + 0.539474
tRNA-Asn-2 chromosome tRNA2633199 76 + 0.539474
tRNA-Asn-3 chromosome tRNA2633078 76 + 0.539474
tRNA-Asn-4 chromosome tRNA2632971 76 + 0.539474
tRNA-Asn-5 chromosome tRNA2632847 76 + 0.539474
tRNA-Asp-1 chromosome tRNA51211 77 + 0.662338
tRNA-Asp-2 chromosome tRNA4688336 77 - 0.662338
tRNA-Asp-3 chromosome tRNA2687616 77 - 0.662338
tRNA-Asp-4 chromosome tRNA2687482 77 - 0.662338
tRNA-Cys-1 chromosome tRNA1955222 74 + 0.621622
tRNA-Cys-2 chromosome tRNA2456939 74 + 0.621622
tRNA-Gln-1 chromosome tRNA1230253 75 + 0.573333
tRNA-Gln-2 chromosome tRNA1229898 75 + 0.573333
tRNA-Gln-3 chromosome tRNA1229802 75 + 0.573333
tRNA-Glu-1 chromosome tRNA3259459 76 - 0.605263
tRNA-Glu-2 chromosome tRNA3259137 76 - 0.605263
tRNA-Glu-3 chromosome tRNA3258983 76 - 0.605263
tRNA-Glu-4 chromosome tRNA3258809 76 - 0.605263
tRNA-Glu-5 chromosome tRNA3258634 76 - 0.605263
tRNA-Glu-6 chromosome tRNA3258460 76 - 0.605263
tRNA-Gly-1 chromosome tRNA620770 76 + 0.513158
tRNA-Gly-2 chromosome tRNA620568 76 + 0.513158
tRNA-Gly-3 chromosome tRNA620370 76 + 0.513158
tRNA-Gly-4 chromosome tRNA620170 76 + 0.513158
tRNA-Gly-5 chromosome tRNA1955125 76 + 0.513158
tRNA-Gly-6 chromosome tRNA227006 74 + 0.567568
tRNA-Gly-7 chromosome tRNA2456843 76 + 0.513158
tRNA-His-1 chromosome tRNA1880270 76 + 0.552632
tRNA-His-2 chromosome tRNA4512224 76 - 0.552632
tRNA-Ile-1 chromosome tRNA218392 77 + 0.584416
tRNA-Ile-2 chromosome tRNA4380679 77 - 0.584416
tRNA-Ile-3 chromosome tRNA2972897 77 - 0.584416
tRNA-Leu-1 chromosome tRNA1955563 87 + 0.551724
tRNA-Leu-2 chromosome tRNA1955344 87 + 0.551724
tRNA-Leu-3 chromosome tRNA4035175 87 - 0.528736
tRNA-Leu-4 chromosome tRNA3748272 87 + 0.574713
tRNA-Leu-5 chromosome tRNA3748144 87 + 0.597701
tRNA-Leu-6 chromosome tRNA2457062 87 + 0.551724
tRNA-Leu-7 chromosome tRNA1245541 87 + 0.62069
tRNA-Leu-8 chromosome tRNA1230132 85 + 0.529412
tRNA-Leu-9 chromosome tRNA1229671 85 + 0.517647
tRNA-Lys-1 chromosome tRNA2867616 76 - 0.513158
tRNA-Lys-2 chromosome tRNA2867486 76 - 0.513158
tRNA-Lys-3 chromosome tRNA2867253 76 - 0.513158
tRNA-Lys-4 chromosome tRNA2867144 76 - 0.513158
tRNA-Lys-5 chromosome tRNA2867035 76 - 0.513158
tRNA-Lys-6 chromosome tRNA2866798 76 - 0.513158
tRNA-Lys-7 chromosome tRNA2866689 76 - 0.513158
tRNA-Lys-8 chromosome tRNA2867362 91 - 0.428571
tRNA-Met-1 chromosome tRNA1940538 77 - 0.597403
tRNA-Met-2 chromosome tRNA1940424 77 - 0.597403
tRNA-Met-3 chromosome tRNA1940200 77 - 0.623377
tRNA-Met-4 chromosome tRNA1939976 77 - 0.623377
tRNA-Met-5 chromosome tRNA1335235 77 - 0.558442
tRNA-Met-6 chromosome tRNA1245711 77 + 0.649351
tRNA-Met-7 chromosome tRNA1229974 77 + 0.545455
tRNA-Met-8 chromosome tRNA1229540 77 + 0.545455
tRNA-Phe-1 chromosome tRNA3748013 76 + 0.565789
tRNA-Phe-2 chromosome tRNA3514336 76 + 0.565789
tRNA-Phe-3 chromosome tRNA3513641 76 + 0.565789
tRNA-Pro-1 chromosome tRNA1880017 77 + 0.571429
tRNA-Pro-2 chromosome tRNA4512132 77 - 0.571429
tRNA-Pro-3 chromosome tRNA4512002 77 - 0.571429
tRNA-Pro-4 chromosome tRNA2124193 77 + 0.61039
tRNA-SeC(p)-1 chromosome tRNA117553 91 - 0.582418
tRNA-Ser-1 chromosome tRNA1951113 91 + 0.582418
tRNA-Ser-2 chromosome tRNA1950041 91 + 0.582418
tRNA-Ser-3 chromosome tRNA3567874 92 - 0.619565
tRNA-Ser-4 chromosome tRNA3567141 92 - 0.619565
tRNA-Ser-5 chromosome tRNA2477570 91 - 0.582418
tRNA-Ser-6 chromosome tRNA2235124 88 + 0.579545
tRNA-Thr-1 chromosome tRNA227089 76 + 0.539474
tRNA-Thr-2 chromosome tRNA226804 76 + 0.552632
tRNA-Thr-3 chromosome tRNA4679233 76 - 0.539474
tRNA-Thr-4 chromosome tRNA3514433 76 + 0.552632
tRNA-Thr-5 chromosome tRNA3513738 76 + 0.552632
tRNA-Trp-1 chromosome tRNA1198589 77 + 0.571429
tRNA-Tyr-1 chromosome tRNA226887 85 + 0.576471
tRNA-Tyr-2 chromosome tRNA2626814 85 + 0.576471
tRNA-Tyr-3 chromosome tRNA2626612 85 + 0.576471
tRNA-Tyr-4 chromosome tRNA2626488 85 + 0.576471
tRNA-Val-1 chromosome tRNA3262168 76 + 0.605263
tRNA-Val-2 chromosome tRNA3262066 76 + 0.618421
tRNA-Val-3 chromosome tRNA3261945 76 + 0.605263
tRNA-Val-4 chromosome tRNA3261842 76 + 0.618421
tRNA-Val-5 chromosome tRNA3261718 76 + 0.592105
tRNA-Val-6 chromosome tRNA2407073 77 - 0.571429
tRNA-Val-7 chromosome tRNA2406959 77 - 0.571429