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2024-05-09 10:16:26

Gene list

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COG category: NOT ANALYZED
Organism: Escherichia coli CFT073, CFT073

Number of genes found: 178

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
IS1-like chromosome repeat_region376708 595 + 0.502521
IS100X-like chromosome repeat_region2347085 1950 + 0.513846
IS100kyp chromosome repeat_region2347085 1950 - 0.513846
IS1351 chromosome repeat_region2315325 435 + 0.48046
IS1351 chromosome repeat_region2315748 523 + 0.470363
IS1397 chromosome repeat_region115321 1427 + 0.48143
IS1397 chromosome repeat_region226129 1427 - 0.48143
IS1541A-like chromosome repeat_region67629 711 + 0.468354
IS1541A-like chromosome repeat_region1311709 711 + 0.468354
IS1541A-like chromosome repeat_region1574016 711 + 0.468354
IS1541A-like chromosome repeat_region2483124 711 - 0.468354
IS1541A-like chromosome repeat_region81932 711 + 0.468354
IS1541A-like chromosome repeat_region3329874 711 - 0.468354
IS1541A-like chromosome repeat_region542208 711 + 0.468354
IS1541A-like chromosome repeat_region5210335 711 + 0.468354
IS1541A-like chromosome repeat_region1239332 711 + 0.468354
IS1541A-like chromosome repeat_region2467364 711 - 0.468354
IS1541A-like chromosome repeat_region3283628 711 - 0.468354
IS1541A-like chromosome repeat_region308 711 + 0.468354
IS1541A-like chromosome repeat_region2231360 711 - 0.468354
IS1541A-like chromosome repeat_region1341555 711 + 0.468354
IS1541A-like chromosome repeat_region749662 711 + 0.468354
IS1541A-like chromosome repeat_region1208542 711 + 0.468354
IS1541A-like chromosome repeat_region2148217 711 - 0.468354
IS1541A-like chromosome repeat_region3026281 711 - 0.468354
IS1541A-like chromosome repeat_region192688 711 + 0.468354
IS1F chromosome repeat_region4283351 760 - 0.521053
IS1H chromosome repeat_region1131351 202 + 0.475248
IS2 chromosome repeat_region3451355 1330 - 0.52782
IS2 chromosome repeat_region4328988 351 + 0.492877
IS285 chromosome repeat_region323928 1304 + 0.499233
IS30D chromosome repeat_region4291959 1221 - 0.454545
IS3E chromosome repeat_region1174451 594 - 0.555556
IS3H chromosome repeat_region1175204 411 - 0.520681
IS4 chromosome repeat_region1539548 983 - 0.550356
IS4 chromosome repeat_region1209253 363 - 0.493113
IS4 chromosome repeat_region3532762 1425 - 0.533333
IS4521R chromosome repeat_region3452324 361 + 0.487535
IS4521R chromosome repeat_region3451371 520 + 0.551923
IS629 chromosome repeat_region4939378 1310 + 0.540458
IS629 chromosome repeat_region130990 1310 + 0.539695
IS629 chromosome repeat_region1398602 1310 + 0.539695
IS629 chromosome repeat_region1415813 1310 + 0.539695
IS629 chromosome repeat_region1212462 1310 - 0.539695
IS629 chromosome repeat_region4966615 1310 - 0.538168
IS629 chromosome repeat_region4931881 1312 - 0.540396
IS629 chromosome repeat_region3439212 1309 - 0.532468
IS629 chromosome repeat_region331375 1310 - 0.539695
IS630 chromosome repeat_region253682 1110 + 0.522523
ISEc10 chromosome repeat_region1402805 2410 - 0.535685
ISEc10 chromosome repeat_region3445765 2410 + 0.535685
ISEc10 chromosome repeat_region1166470 660 - 0.542424
ISEc10 chromosome repeat_region4919911 2410 + 0.535685
ISEc10 chromosome repeat_region1234406 2410 + 0.535685
ISEc10 chromosome repeat_region255335 2413 + 0.535433
ISEc10 chromosome repeat_region2343328 2410 + 0.535685
ISEc2 chromosome repeat_region5130002 106 - 0.320755
ISEc2 chromosome repeat_region1715771 144 + 0.319444
ISEc8 chromosome repeat_region3411318 16971 + 0.442225
ISEc8 chromosome repeat_region3482089 1577 + 0.593532
ISEhe3 chromosome repeat_region4293180 917 + 0.51145
ISSfl4 chromosome repeat_region2341185 1451 + 0.574087
alaT c5585 tRNA-Ala chromosome tRNA4562924 76 + 0.631579
alaW tRNA-Ala chromosome tRNA2799191 76 - 0.605263
alaX tRNA-Ala chromosome tRNA2799076 76 - 0.605263
argQ tRNA-Arg chromosome tRNA3100520 77 - 0.597403
argV tRNA-Arg chromosome tRNA3100939 77 - 0.597403
argW tRNA-Arg chromosome tRNA2746725 75 + 0.493333
argX tRNA-Arg chromosome tRNA4482539 77 + 0.675325
argY tRNA-Arg chromosome tRNA3100798 77 - 0.597403
argZ tRNA-Arg chromosome tRNA3100659 77 - 0.597403
asnT tRNA-Asn chromosome tRNA2217922 76 + 0.526316
asnU tRNA-Asn chromosome tRNA2260925 76 - 0.526316
asnV tRNA-Asn chromosome tRNA2258516 76 - 0.526316
asnW tRNA-Asn chromosome tRNA2262749 76 + 0.526316
aspT tRNA-Asp chromosome tRNA4447909 77 + 0.636364
aspU tRNA-Asp chromosome tRNA240329 77 + 0.636364
aspV tRNA-Asp chromosome tRNA248554 77 + 0.636364
c5511 tRNA-Glu chromosome tRNA236813 77 + 0.636364
c5512 tRNA-Ala chromosome tRNA236902 75 + 0.6
c5516 tRNA-OTHER chromosome tRNA434982 81 + 0.567901
c5517 tRNA-Arg chromosome tRNA627071 77 + 0.61039
c5523 tRNA-Leu chromosome tRNA729836 85 - 0.6
c5524 tRNA-Met chromosome tRNA729931 77 - 0.519481
c5534 tRNA-Arg chromosome tRNA1211152 77 + 0.597403
c5536 tRNA-Met chromosome tRNA1342304 76 + 0.578947
c5537 tRNA-Arg chromosome tRNA1342387 77 + 0.61039
c5538 tRNA-Arg chromosome tRNA1342477 77 + 0.519481
c5560 tRNA-Arg chromosome tRNA3100380 77 - 0.597403
c5574 tRNA-Glu chromosome tRNA3858429 76 - 0.644737
cysT tRNA-Cys chromosome tRNA2140591 74 - 0.567568
dicF DicF antisense RNA chromosome misc_RNA1051024 53 - 0.528302
dsrA anti-sense RNA silencer of rcsA gene chromosome misc_RNA1895941 85 - 0.376471
ffs 4.5S RNA chromosome misc_RNA271999 138 + 0.405797
glnU tRNA-Gln chromosome tRNA729738 75 - 0.573333
glnV tRNA-Gln chromosome tRNA729414 75 - 0.586667
glnW tRNA-Gln chromosome tRNA729629 75 - 0.573333
glnX tRNA-Gln chromosome tRNA729302 75 - 0.586667
gltT c5586 tRNA-Glu chromosome tRNA4700785 76 + 0.644737
gltU tRNA-Glu chromosome tRNA4444468 76 + 0.644737
gltV c5591 tRNA-Glu chromosome tRNA4740956 76 + 0.644737
gltW tRNA-Glu chromosome tRNA2992062 76 - 0.644737
glyT c5589 tRNA-Gly chromosome tRNA4707921 75 + 0.573333
glyU tRNA-Gly chromosome tRNA3295426 74 - 0.567568
glyV c5593 tRNA-Gly chromosome tRNA5000526 76 + 0.605263
glyW tRNA-Gly chromosome tRNA2140718 76 - 0.605263
glyX c5594 tRNA-Gly chromosome tRNA5000638 76 + 0.605263
glyY c5595 tRNA-Gly chromosome tRNA5000749 76 + 0.605263
hisR tRNA-His chromosome tRNA4482673 77 + 0.532468
ileT c5584 tRNA-Ile chromosome tRNA4562805 77 + 0.571429
ileX tRNA-Ile chromosome tRNA3656193 76 + 0.592105
leuP tRNA-Leu chromosome tRNA5195189 87 - 0.597701
leuQ tRNA-Leu chromosome tRNA5195304 87 - 0.609195
leuT tRNA-Leu chromosome tRNA4482770 87 + 0.609195
leuU tRNA-Leu chromosome tRNA3755703 87 - 0.574713
leuV tRNA-Leu chromosome tRNA5195068 87 - 0.609195
leuX c5596 tRNA-Leu chromosome tRNA5115342 85 + 0.541176
leuZ tRNA-Leu chromosome tRNA2140492 87 - 0.597701
lysQ tRNA-Lys chromosome tRNA803853 76 + 0.5
lysT tRNA-Lys chromosome tRNA803225 76 + 0.5
lysV tRNA-Lys chromosome tRNA2802286 76 + 0.5
lysW tRNA-Lys chromosome tRNA803414 76 + 0.5
lysY tRNA-Lys chromosome tRNA803620 76 + 0.5
lysZ tRNA-Lys chromosome tRNA803744 76 + 0.5
metU tRNA-Met chromosome tRNA729537 77 - 0.519481
metV tRNA-Met chromosome tRNA3222311 77 + 0.662338
metW tRNA-Met chromosome tRNA3222201 77 + 0.649351
metY tRNA-Met chromosome tRNA3751846 77 - 0.662338
metZ tRNA-Met chromosome tRNA3222091 77 + 0.662338
pheU c5592 tRNA-Phe chromosome tRNA4971585 76 - 0.592105
pheV tRNA-Phe chromosome tRNA3406225 76 + 0.592105
proK tRNA-Pro chromosome tRNA4147653 77 - 0.61039
proL tRNA-Pro chromosome tRNA2576748 77 + 0.662338
proM tRNA-Pro chromosome tRNA4482899 77 + 0.623377
rnpB RNase P, RNA component chromosome misc_RNA3426479 377 - 0.485411
rrfA c5608 5S ribosomal RNA chromosome rRNA4566175 120 + 0.633333
rrfB c5611 5S ribosomal RNA chromosome rRNA4704051 120 + 0.633333
rrfC 5S ribosomal RNA chromosome rRNA4447738 120 + 0.641667
rrfD 5S ribosomal RNA chromosome rRNA3855028 113 - 0.637168
rrfE c5614 5S ribosomal RNA chromosome rRNA4744226 120 + 0.633333
rrfG 5S ribosomal RNA chromosome rRNA2988760 120 - 0.633333
rrfH 5S ribosomal RNA chromosome rRNA240157 120 + 0.633333
rrlA c5607 23S ribosomal RNA chromosome rRNA4563174 2908 + 0.530605
rrlB c5610 23S ribosomal RNA chromosome rRNA4701054 2904 + 0.53478
rrlC 23S ribosomal RNA chromosome rRNA4444737 2908 + 0.533012
rrlD 23S ribosomal RNA chromosome rRNA3855236 2905 - 0.533563
rrlE c5613 23S ribosomal RNA chromosome rRNA4741226 2907 + 0.532852
rrlG 23S ribosomal RNA chromosome rRNA2988973 2905 - 0.534596
rrlH 23S ribosomal RNA chromosome rRNA237160 2904 + 0.532713
rrsA c5606 16S ribosomal RNA chromosome rRNA4561194 1543 + 0.545042
rrsB c5609 16S ribosomal RNA chromosome rRNA4699063 1551 + 0.544165
rrsC 16S ribosomal RNA chromosome rRNA4442840 1543 + 0.539209
rrsD 16S ribosomal RNA chromosome rRNA3858590 1542 - 0.54345
rrsE c5612 16S ribosomal RNA chromosome rRNA4739329 1542 + 0.54345
rrsG 16S ribosomal RNA chromosome rRNA2992309 1551 - 0.540297
rrsH 16S ribosomal RNA chromosome rRNA235186 1542 + 0.541505
selC tRNA-Sec chromosome tRNA4274308 91 + 0.637363
serT tRNA-Ser chromosome tRNA1075414 88 - 0.602273
serU tRNA-Ser chromosome tRNA2216841 90 - 0.633333
serV tRNA-Ser chromosome tRNA3101019 93 - 0.645161
serW tRNA-Ser chromosome tRNA980013 88 - 0.613636
serX tRNA-Ser chromosome tRNA1241062 88 - 0.613636
spf spot 42 RNA chromosome misc_RNA4294331 109 + 0.412844
ssrS 6S RNA chromosome misc_RNA3070879 183 + 0.579235
thrT c5590 tRNA-Thr chromosome tRNA4708002 76 + 0.539474
thrU c5587 tRNA-Thr chromosome tRNA4707636 76 + 0.513158
thrW tRNA-Thr chromosome tRNA370224 76 + 0.513158
trpT tRNA-Trp chromosome tRNA4447994 76 + 0.592105
tyrT tRNA-Tyr chromosome tRNA1532509 85 - 0.588235
tyrU c5588 tRNA-Tyr chromosome tRNA4707720 85 + 0.588235
tyrV tRNA-Tyr chromosome tRNA1532391 85 - 0.588235
valT tRNA-Val chromosome tRNA803336 76 + 0.618421
valU tRNA-Val chromosome tRNA2801965 76 + 0.618421
valV tRNA-Val chromosome tRNA1902573 77 + 0.532468
valW tRNA-Val chromosome tRNA1902654 77 + 0.61039
valX tRNA-Val chromosome tRNA2802084 76 + 0.618421
valY tRNA-Val chromosome tRNA2802206 76 + 0.618421
valZ tRNA-Val chromosome tRNA803541 76 + 0.618421