Gene list
Applied filters:
COG category: NOT ANALYZED
Organism: Escherichia coli CFT073, CFT073
Number of genes found: 178
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli CFT073, CFT073 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
IS1-like | chromosome | repeat_region | 376708 | 595 | + | 0.502521 | ||
IS100X-like | chromosome | repeat_region | 2347085 | 1950 | + | 0.513846 | ||
IS100kyp | chromosome | repeat_region | 2347085 | 1950 | - | 0.513846 | ||
IS1351 | chromosome | repeat_region | 2315748 | 523 | + | 0.470363 | ||
IS1351 | chromosome | repeat_region | 2315325 | 435 | + | 0.48046 | ||
IS1397 | chromosome | repeat_region | 115321 | 1427 | + | 0.48143 | ||
IS1397 | chromosome | repeat_region | 226129 | 1427 | - | 0.48143 | ||
IS1541A-like | chromosome | repeat_region | 67629 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 2483124 | 711 | - | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 192688 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 2467364 | 711 | - | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 1208542 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 81932 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 3026281 | 711 | - | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 3283628 | 711 | - | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 1311709 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 308 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 2148217 | 711 | - | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 1239332 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 749662 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 5210335 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 1574016 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 3329874 | 711 | - | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 1341555 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 542208 | 711 | + | 0.468354 | ||
IS1541A-like | chromosome | repeat_region | 2231360 | 711 | - | 0.468354 | ||
IS1F | chromosome | repeat_region | 4283351 | 760 | - | 0.521053 | ||
IS1H | chromosome | repeat_region | 1131351 | 202 | + | 0.475248 | ||
IS2 | chromosome | repeat_region | 4328988 | 351 | + | 0.492877 | ||
IS2 | chromosome | repeat_region | 3451355 | 1330 | - | 0.52782 | ||
IS285 | chromosome | repeat_region | 323928 | 1304 | + | 0.499233 | ||
IS30D | chromosome | repeat_region | 4291959 | 1221 | - | 0.454545 | ||
IS3E | chromosome | repeat_region | 1174451 | 594 | - | 0.555556 | ||
IS3H | chromosome | repeat_region | 1175204 | 411 | - | 0.520681 | ||
IS4 | chromosome | repeat_region | 3532762 | 1425 | - | 0.533333 | ||
IS4 | chromosome | repeat_region | 1209253 | 363 | - | 0.493113 | ||
IS4 | chromosome | repeat_region | 1539548 | 983 | - | 0.550356 | ||
IS4521R | chromosome | repeat_region | 3451371 | 520 | + | 0.551923 | ||
IS4521R | chromosome | repeat_region | 3452324 | 361 | + | 0.487535 | ||
IS629 | chromosome | repeat_region | 1415813 | 1310 | + | 0.539695 | ||
IS629 | chromosome | repeat_region | 1212462 | 1310 | - | 0.539695 | ||
IS629 | chromosome | repeat_region | 331375 | 1310 | - | 0.539695 | ||
IS629 | chromosome | repeat_region | 130990 | 1310 | + | 0.539695 | ||
IS629 | chromosome | repeat_region | 3439212 | 1309 | - | 0.532468 | ||
IS629 | chromosome | repeat_region | 4966615 | 1310 | - | 0.538168 | ||
IS629 | chromosome | repeat_region | 4931881 | 1312 | - | 0.540396 | ||
IS629 | chromosome | repeat_region | 1398602 | 1310 | + | 0.539695 | ||
IS629 | chromosome | repeat_region | 4939378 | 1310 | + | 0.540458 | ||
IS630 | chromosome | repeat_region | 253682 | 1110 | + | 0.522523 | ||
ISEc10 | chromosome | repeat_region | 255335 | 2413 | + | 0.535433 | ||
ISEc10 | chromosome | repeat_region | 1166470 | 660 | - | 0.542424 | ||
ISEc10 | chromosome | repeat_region | 4919911 | 2410 | + | 0.535685 | ||
ISEc10 | chromosome | repeat_region | 1402805 | 2410 | - | 0.535685 | ||
ISEc10 | chromosome | repeat_region | 2343328 | 2410 | + | 0.535685 | ||
ISEc10 | chromosome | repeat_region | 1234406 | 2410 | + | 0.535685 | ||
ISEc10 | chromosome | repeat_region | 3445765 | 2410 | + | 0.535685 | ||
ISEc2 | chromosome | repeat_region | 1715771 | 144 | + | 0.319444 | ||
ISEc2 | chromosome | repeat_region | 5130002 | 106 | - | 0.320755 | ||
ISEc8 | chromosome | repeat_region | 3411318 | 16971 | + | 0.442225 | ||
ISEc8 | chromosome | repeat_region | 3482089 | 1577 | + | 0.593532 | ||
ISEhe3 | chromosome | repeat_region | 4293180 | 917 | + | 0.51145 | ||
ISSfl4 | chromosome | repeat_region | 2341185 | 1451 | + | 0.574087 | ||
alaT | c5585 | tRNA-Ala | chromosome | tRNA | 4562924 | 76 | + | 0.631579 |
alaW | tRNA-Ala | chromosome | tRNA | 2799191 | 76 | - | 0.605263 | |
alaX | tRNA-Ala | chromosome | tRNA | 2799076 | 76 | - | 0.605263 | |
argQ | tRNA-Arg | chromosome | tRNA | 3100520 | 77 | - | 0.597403 | |
argV | tRNA-Arg | chromosome | tRNA | 3100939 | 77 | - | 0.597403 | |
argW | tRNA-Arg | chromosome | tRNA | 2746725 | 75 | + | 0.493333 | |
argX | tRNA-Arg | chromosome | tRNA | 4482539 | 77 | + | 0.675325 | |
argY | tRNA-Arg | chromosome | tRNA | 3100798 | 77 | - | 0.597403 | |
argZ | tRNA-Arg | chromosome | tRNA | 3100659 | 77 | - | 0.597403 | |
asnT | tRNA-Asn | chromosome | tRNA | 2217922 | 76 | + | 0.526316 | |
asnU | tRNA-Asn | chromosome | tRNA | 2260925 | 76 | - | 0.526316 | |
asnV | tRNA-Asn | chromosome | tRNA | 2258516 | 76 | - | 0.526316 | |
asnW | tRNA-Asn | chromosome | tRNA | 2262749 | 76 | + | 0.526316 | |
aspT | tRNA-Asp | chromosome | tRNA | 4447909 | 77 | + | 0.636364 | |
aspU | tRNA-Asp | chromosome | tRNA | 240329 | 77 | + | 0.636364 | |
aspV | tRNA-Asp | chromosome | tRNA | 248554 | 77 | + | 0.636364 | |
c5511 | tRNA-Glu | chromosome | tRNA | 236813 | 77 | + | 0.636364 | |
c5512 | tRNA-Ala | chromosome | tRNA | 236902 | 75 | + | 0.6 | |
c5516 | tRNA-OTHER | chromosome | tRNA | 434982 | 81 | + | 0.567901 | |
c5517 | tRNA-Arg | chromosome | tRNA | 627071 | 77 | + | 0.61039 | |
c5523 | tRNA-Leu | chromosome | tRNA | 729836 | 85 | - | 0.6 | |
c5524 | tRNA-Met | chromosome | tRNA | 729931 | 77 | - | 0.519481 | |
c5534 | tRNA-Arg | chromosome | tRNA | 1211152 | 77 | + | 0.597403 | |
c5536 | tRNA-Met | chromosome | tRNA | 1342304 | 76 | + | 0.578947 | |
c5537 | tRNA-Arg | chromosome | tRNA | 1342387 | 77 | + | 0.61039 | |
c5538 | tRNA-Arg | chromosome | tRNA | 1342477 | 77 | + | 0.519481 | |
c5560 | tRNA-Arg | chromosome | tRNA | 3100380 | 77 | - | 0.597403 | |
c5574 | tRNA-Glu | chromosome | tRNA | 3858429 | 76 | - | 0.644737 | |
cysT | tRNA-Cys | chromosome | tRNA | 2140591 | 74 | - | 0.567568 | |
dicF | DicF antisense RNA | chromosome | misc_RNA | 1051024 | 53 | - | 0.528302 | |
dsrA | anti-sense RNA silencer of rcsA gene | chromosome | misc_RNA | 1895941 | 85 | - | 0.376471 | |
ffs | 4.5S RNA | chromosome | misc_RNA | 271999 | 138 | + | 0.405797 | |
glnU | tRNA-Gln | chromosome | tRNA | 729738 | 75 | - | 0.573333 | |
glnV | tRNA-Gln | chromosome | tRNA | 729414 | 75 | - | 0.586667 | |
glnW | tRNA-Gln | chromosome | tRNA | 729629 | 75 | - | 0.573333 | |
glnX | tRNA-Gln | chromosome | tRNA | 729302 | 75 | - | 0.586667 | |
gltT | c5586 | tRNA-Glu | chromosome | tRNA | 4700785 | 76 | + | 0.644737 |
gltU | tRNA-Glu | chromosome | tRNA | 4444468 | 76 | + | 0.644737 | |
gltV | c5591 | tRNA-Glu | chromosome | tRNA | 4740956 | 76 | + | 0.644737 |
gltW | tRNA-Glu | chromosome | tRNA | 2992062 | 76 | - | 0.644737 | |
glyT | c5589 | tRNA-Gly | chromosome | tRNA | 4707921 | 75 | + | 0.573333 |
glyU | tRNA-Gly | chromosome | tRNA | 3295426 | 74 | - | 0.567568 | |
glyV | c5593 | tRNA-Gly | chromosome | tRNA | 5000526 | 76 | + | 0.605263 |
glyW | tRNA-Gly | chromosome | tRNA | 2140718 | 76 | - | 0.605263 | |
glyX | c5594 | tRNA-Gly | chromosome | tRNA | 5000638 | 76 | + | 0.605263 |
glyY | c5595 | tRNA-Gly | chromosome | tRNA | 5000749 | 76 | + | 0.605263 |
hisR | tRNA-His | chromosome | tRNA | 4482673 | 77 | + | 0.532468 | |
ileT | c5584 | tRNA-Ile | chromosome | tRNA | 4562805 | 77 | + | 0.571429 |
ileX | tRNA-Ile | chromosome | tRNA | 3656193 | 76 | + | 0.592105 | |
leuP | tRNA-Leu | chromosome | tRNA | 5195189 | 87 | - | 0.597701 | |
leuQ | tRNA-Leu | chromosome | tRNA | 5195304 | 87 | - | 0.609195 | |
leuT | tRNA-Leu | chromosome | tRNA | 4482770 | 87 | + | 0.609195 | |
leuU | tRNA-Leu | chromosome | tRNA | 3755703 | 87 | - | 0.574713 | |
leuV | tRNA-Leu | chromosome | tRNA | 5195068 | 87 | - | 0.609195 | |
leuX | c5596 | tRNA-Leu | chromosome | tRNA | 5115342 | 85 | + | 0.541176 |
leuZ | tRNA-Leu | chromosome | tRNA | 2140492 | 87 | - | 0.597701 | |
lysQ | tRNA-Lys | chromosome | tRNA | 803853 | 76 | + | 0.5 | |
lysT | tRNA-Lys | chromosome | tRNA | 803225 | 76 | + | 0.5 | |
lysV | tRNA-Lys | chromosome | tRNA | 2802286 | 76 | + | 0.5 | |
lysW | tRNA-Lys | chromosome | tRNA | 803414 | 76 | + | 0.5 | |
lysY | tRNA-Lys | chromosome | tRNA | 803620 | 76 | + | 0.5 | |
lysZ | tRNA-Lys | chromosome | tRNA | 803744 | 76 | + | 0.5 | |
metU | tRNA-Met | chromosome | tRNA | 729537 | 77 | - | 0.519481 | |
metV | tRNA-Met | chromosome | tRNA | 3222311 | 77 | + | 0.662338 | |
metW | tRNA-Met | chromosome | tRNA | 3222201 | 77 | + | 0.649351 | |
metY | tRNA-Met | chromosome | tRNA | 3751846 | 77 | - | 0.662338 | |
metZ | tRNA-Met | chromosome | tRNA | 3222091 | 77 | + | 0.662338 | |
pheU | c5592 | tRNA-Phe | chromosome | tRNA | 4971585 | 76 | - | 0.592105 |
pheV | tRNA-Phe | chromosome | tRNA | 3406225 | 76 | + | 0.592105 | |
proK | tRNA-Pro | chromosome | tRNA | 4147653 | 77 | - | 0.61039 | |
proL | tRNA-Pro | chromosome | tRNA | 2576748 | 77 | + | 0.662338 | |
proM | tRNA-Pro | chromosome | tRNA | 4482899 | 77 | + | 0.623377 | |
rnpB | RNase P, RNA component | chromosome | misc_RNA | 3426479 | 377 | - | 0.485411 | |
rrfA | c5608 | 5S ribosomal RNA | chromosome | rRNA | 4566175 | 120 | + | 0.633333 |
rrfB | c5611 | 5S ribosomal RNA | chromosome | rRNA | 4704051 | 120 | + | 0.633333 |
rrfC | 5S ribosomal RNA | chromosome | rRNA | 4447738 | 120 | + | 0.641667 | |
rrfD | 5S ribosomal RNA | chromosome | rRNA | 3855028 | 113 | - | 0.637168 | |
rrfE | c5614 | 5S ribosomal RNA | chromosome | rRNA | 4744226 | 120 | + | 0.633333 |
rrfG | 5S ribosomal RNA | chromosome | rRNA | 2988760 | 120 | - | 0.633333 | |
rrfH | 5S ribosomal RNA | chromosome | rRNA | 240157 | 120 | + | 0.633333 | |
rrlA | c5607 | 23S ribosomal RNA | chromosome | rRNA | 4563174 | 2908 | + | 0.530605 |
rrlB | c5610 | 23S ribosomal RNA | chromosome | rRNA | 4701054 | 2904 | + | 0.53478 |
rrlC | 23S ribosomal RNA | chromosome | rRNA | 4444737 | 2908 | + | 0.533012 | |
rrlD | 23S ribosomal RNA | chromosome | rRNA | 3855236 | 2905 | - | 0.533563 | |
rrlE | c5613 | 23S ribosomal RNA | chromosome | rRNA | 4741226 | 2907 | + | 0.532852 |
rrlG | 23S ribosomal RNA | chromosome | rRNA | 2988973 | 2905 | - | 0.534596 | |
rrlH | 23S ribosomal RNA | chromosome | rRNA | 237160 | 2904 | + | 0.532713 | |
rrsA | c5606 | 16S ribosomal RNA | chromosome | rRNA | 4561194 | 1543 | + | 0.545042 |
rrsB | c5609 | 16S ribosomal RNA | chromosome | rRNA | 4699063 | 1551 | + | 0.544165 |
rrsC | 16S ribosomal RNA | chromosome | rRNA | 4442840 | 1543 | + | 0.539209 | |
rrsD | 16S ribosomal RNA | chromosome | rRNA | 3858590 | 1542 | - | 0.54345 | |
rrsE | c5612 | 16S ribosomal RNA | chromosome | rRNA | 4739329 | 1542 | + | 0.54345 |
rrsG | 16S ribosomal RNA | chromosome | rRNA | 2992309 | 1551 | - | 0.540297 | |
rrsH | 16S ribosomal RNA | chromosome | rRNA | 235186 | 1542 | + | 0.541505 | |
selC | tRNA-Sec | chromosome | tRNA | 4274308 | 91 | + | 0.637363 | |
serT | tRNA-Ser | chromosome | tRNA | 1075414 | 88 | - | 0.602273 | |
serU | tRNA-Ser | chromosome | tRNA | 2216841 | 90 | - | 0.633333 | |
serV | tRNA-Ser | chromosome | tRNA | 3101019 | 93 | - | 0.645161 | |
serW | tRNA-Ser | chromosome | tRNA | 980013 | 88 | - | 0.613636 | |
serX | tRNA-Ser | chromosome | tRNA | 1241062 | 88 | - | 0.613636 | |
spf | spot 42 RNA | chromosome | misc_RNA | 4294331 | 109 | + | 0.412844 | |
ssrS | 6S RNA | chromosome | misc_RNA | 3070879 | 183 | + | 0.579235 | |
thrT | c5590 | tRNA-Thr | chromosome | tRNA | 4708002 | 76 | + | 0.539474 |
thrU | c5587 | tRNA-Thr | chromosome | tRNA | 4707636 | 76 | + | 0.513158 |
thrW | tRNA-Thr | chromosome | tRNA | 370224 | 76 | + | 0.513158 | |
trpT | tRNA-Trp | chromosome | tRNA | 4447994 | 76 | + | 0.592105 | |
tyrT | tRNA-Tyr | chromosome | tRNA | 1532509 | 85 | - | 0.588235 | |
tyrU | c5588 | tRNA-Tyr | chromosome | tRNA | 4707720 | 85 | + | 0.588235 |
tyrV | tRNA-Tyr | chromosome | tRNA | 1532391 | 85 | - | 0.588235 | |
valT | tRNA-Val | chromosome | tRNA | 803336 | 76 | + | 0.618421 | |
valU | tRNA-Val | chromosome | tRNA | 2801965 | 76 | + | 0.618421 | |
valV | tRNA-Val | chromosome | tRNA | 1902573 | 77 | + | 0.532468 | |
valW | tRNA-Val | chromosome | tRNA | 1902654 | 77 | + | 0.61039 | |
valX | tRNA-Val | chromosome | tRNA | 2802084 | 76 | + | 0.618421 | |
valY | tRNA-Val | chromosome | tRNA | 2802206 | 76 | + | 0.618421 | |
valZ | tRNA-Val | chromosome | tRNA | 803541 | 76 | + | 0.618421 |