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2024-05-02 08:38:04

Gene list

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COG category: NOT ANALYZED
Organism: Escherichia coli K12, K-12

Number of genes found: 232

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA chromosome misc_feature2064183 12873 + 0.517284
NA tRNA-Leuchromosome tRNA4604101 88 - 0.602273
NA chromosome misc_feature1409949 23060 + 0.465525
NA chromosome misc_feature2556721 6790 + 0.483358
NA chromosome misc_feature1195443 15204 + 0.452973
NA chromosome misc_feature2464407 10215 + 0.440627
NA chromosome misc_feature1588774 28 - 0.285714
NA chromosome misc_feature564025 21302 + 0.432682
NA chromosome misc_feature4494563 40070 + 0.501622
NA chromosome misc_feature2753971 22031 + 0.461305
NA chromosome misc_feature1630310 20469 + 0.444184
NA b4489 chromosome rep_origin3923767 232 + 0.409483
NA chromosome misc_feature262182 34308 + 0.534482
IS061 b4426 unknown RNAchromosome misc_RNA1403676 158 - 0.449367
IS092 b4434 unknown RNAchromosome misc_RNA1985863 160 - 0.43125
IS1 chromosome repeat_region278387 768 - 0.535156
IS1 chromosome repeat_region3581451 768 + 0.532552
IS1 chromosome repeat_region289858 768 - 0.535156
IS1 chromosome repeat_region1049001 768 + 0.53125
IS1 chromosome repeat_region1976527 768 - 0.532552
IS1 chromosome repeat_region4516495 768 + 0.516927
IS1 chromosome repeat_region19796 768 - 0.532552
IS102 b4435 unknown RNAchromosome misc_RNA2069339 204 + 0.426471
IS150 chromosome repeat_region3718656 1443 + 0.440748
IS183 b4452 unknown RNAchromosome misc_RNA3662887 105 + 0.495238
IS186 chromosome repeat_region15388 1343 + 0.513775
IS186 chromosome repeat_region607231 1343 + 0.513775
IS186 chromosome repeat_region2512296 1343 + 0.513775
IS2 chromosome repeat_region3184118 1331 - 0.530428
IS2 chromosome repeat_region380484 1331 - 0.530428
IS2 chromosome repeat_region2066965 1331 + 0.530428
IS2 chromosome repeat_region2994383 1331 + 0.530428
IS2 chromosome repeat_region1465934 1331 + 0.530428
IS2 chromosome repeat_region4496204 1331 - 0.530428
IS2 chromosome repeat_region1648867 706 - 0.543909
IS3 chromosome repeat_region566000 1258 + 0.535771
IS3 chromosome repeat_region1093468 1258 - 0.535771
IS3 chromosome repeat_region390933 1258 - 0.535771
IS3 chromosome repeat_region314453 1255 + 0.536255
IS3 chromosome repeat_region2168195 1258 + 0.535771
IS30 chromosome repeat_region4505482 1221 - 0.454545
IS30 chromosome repeat_region1467320 1221 + 0.454545
IS30 chromosome repeat_region269765 1221 + 0.454545
IS4 chromosome repeat_region4500113 1426 - 0.535063
IS5 chromosome repeat_region1394068 1195 - 0.532218
IS5 chromosome repeat_region2064183 1195 + 0.531381
IS5 chromosome repeat_region3363578 1195 + 0.532218
IS5 chromosome repeat_region573814 1195 + 0.532218
IS5 chromosome repeat_region1425623 1196 + 0.537625
IS5 chromosome repeat_region2099773 1195 + 0.532218
IS5 chromosome repeat_region2286941 1195 + 0.532218
IS5 chromosome repeat_region687074 1195 + 0.532218
IS5 chromosome repeat_region273179 1195 + 0.532218
IS5 chromosome repeat_region3128168 1195 - 0.532218
IS5 chromosome repeat_region3650059 1195 + 0.532218
IS600 chromosome repeat_region4506703 327 - 0.458716
IS911B chromosome repeat_region4505138 338 + 0.446746
IS911B chromosome repeat_region4507030 795 + 0.540881
alaT b3853 tRNA-Alachromosome tRNA4035283 76 + 0.631579
alaU b3276 tRNA-Alachromosome tRNA3424980 76 - 0.631579
alaV b0203 tRNA-Alachromosome tRNA225500 76 + 0.631579
alaW b2397 tRNA-Alachromosome tRNA2516178 76 - 0.605263
alaX b2396 tRNA-Alachromosome tRNA2516063 76 - 0.605263
argQ b2691 tRNA-Argchromosome tRNA2815806 77 - 0.597403
argU b0536 tRNA-Argchromosome tRNA563946 77 + 0.61039
argV b2694 tRNA-Argchromosome tRNA2816495 77 - 0.597403
argW b2348 tRNA-Argchromosome tRNA2464331 75 + 0.493333
argX b3796 tRNA-Argchromosome tRNA3980398 77 + 0.675325
argY b2693 tRNA-Argchromosome tRNA2816220 77 - 0.597403
argZ b2692 tRNA-Argchromosome tRNA2816081 77 - 0.597403
arpB b4494 chromosome pseudo1801118 1900 + 0.390526
arpB b4494 chromosome pseudo1801118 1900 + 0.390526
asnT b1977 tRNA-Asnchromosome tRNA2042573 76 + 0.526316
asnU b1986 tRNA-Asnchromosome tRNA2057875 76 + 0.526316
asnV b1989 tRNA-Asnchromosome tRNA2060284 76 + 0.526316
asnW b1984 tRNA-Asnchromosome tRNA2056051 76 - 0.526316
aspT b3760 tRNA-Aspchromosome tRNA3944895 77 + 0.636364
aspU b0206 tRNA-Aspchromosome tRNA228928 77 + 0.636364
aspV b0216 tRNA-Aspchromosome tRNA236931 77 + 0.636364
csrB b4408 CsrB regulatory RNAchromosome misc_RNA2922178 360 - 0.511111
csrC b4457 CsrC regulatory RNAchromosome misc_RNA4049059 245 + 0.485714
cysT b1910 tRNA-Cyschromosome tRNA1989938 74 - 0.567568
dicF b1574 Qin prophage; DicF antisense RNA inhibits ftsZ translationchromosome misc_RNA1647406 53 + 0.54717
dsrA b1954 anti-sense RNA, silencer of rcsA gene, interacts with rpoS translationchromosome misc_RNA2023251 87 - 0.436782
ffs b0455 4.5S RNA (component of ribonucleoprotein particle)chromosome misc_RNA475672 114 + 0.640351
gapC b4493 chromosome pseudo1487737 653 - 0.500766
gapC b4493 chromosome pseudo1487737 653 - 0.500766
gatR b4498 chromosome pseudo2167717 2041 - 0.508574
gatR b4498 chromosome pseudo2167717 2041 - 0.508574
gcvB b4443 regulatory RNAchromosome misc_RNA2940718 205 + 0.429268
glnU b0670 tRNA-Glnchromosome tRNA696088 75 - 0.573333
glnV b0665 tRNA-Glnchromosome tRNA695765 75 - 0.586667
glnW b0668 tRNA-Glnchromosome tRNA695979 75 - 0.573333
glnX b0664 tRNA-Glnchromosome tRNA695653 75 - 0.586667
gltT b3969 tRNA-Gluchromosome tRNA4166395 76 + 0.644737
gltU b3757 tRNA-Gluchromosome tRNA3941458 76 + 0.644737
gltV b4008 tRNA-Gluchromosome tRNA4207797 76 + 0.644737
gltW b2590 tRNA-Gluchromosome tRNA2727391 76 - 0.644737
glyT b3978 tRNA-Glychromosome tRNA4173696 75 + 0.573333
glyU b2864 tRNA-Glychromosome tRNA2997006 74 - 0.567568
glyV b4163 tRNA-Glychromosome tRNA4390383 76 + 0.605263
glyW b1911 tRNA-Glychromosome tRNA1990066 76 - 0.605263
glyX b4164 tRNA-Glychromosome tRNA4390495 76 + 0.605263
glyY b4165 tRNA-Glychromosome tRNA4390606 76 + 0.605263
hisR b3797 tRNA-Hischromosome tRNA3980532 77 + 0.532468
ileT b3852 tRNA-Ilechromosome tRNA4035164 77 + 0.571429
ileU b3277 tRNA-Ilechromosome tRNA3425098 77 - 0.571429
ileV b0202 tRNA-Ilechromosome tRNA225381 77 + 0.571429
ileX b3069 tRNA-Ilechromosome tRNA3213620 76 + 0.592105
ileY b2652 tRNA-Ilechromosome tRNA2783784 76 - 0.565789
leuP b4369 tRNA-Leuchromosome tRNA4604223 87 - 0.597701
leuQ b4370 tRNA-Leuchromosome tRNA4604338 87 - 0.609195
leuT b3798 tRNA-Leuchromosome tRNA3980629 87 + 0.609195
leuU b3174 tRNA-Leuchromosome tRNA3320094 87 - 0.574713
leuW b0672 tRNA-Leuchromosome tRNA696186 85 - 0.6
leuX b4270 tRNA-Leuchromosome tRNA4494428 85 + 0.541176
leuZ b1909 tRNA-Leuchromosome tRNA1989839 87 - 0.597701
lysQ b0749 tRNA-Lyschromosome tRNA780800 76 + 0.5
lysT b0743 tRNA-Lyschromosome tRNA779777 76 + 0.5
lysV b2404 tRNA-Lyschromosome tRNA2519275 76 + 0.5
lysW b0745 tRNA-Lyschromosome tRNA780066 76 + 0.5
lysY b0747 tRNA-Lyschromosome tRNA780370 76 + 0.5
lysZ b0748 tRNA-Lyschromosome tRNA780592 76 + 0.5
metT b0673 tRNA-Metchromosome tRNA696280 77 - 0.519481
metU b0666 tRNA-Metchromosome tRNA695887 77 - 0.519481
metV b2816 tRNA-Metchromosome tRNA2945629 77 + 0.662338
metW b2815 tRNA-Metchromosome tRNA2945519 77 + 0.662338
metY b3171 tRNA-Metchromosome tRNA3316235 77 - 0.649351
metZ b2814 tRNA-Metchromosome tRNA2945409 77 + 0.662338
micF b4439 regulatory antisense RNA affecting ompF expressionchromosome misc_RNA2311106 93 + 0.354839
molR b4499 chromosome pseudo2194496 3796 + 0.502898
molR b4499 chromosome pseudo2194496 3796 + 0.502898
oxyS b4458 global regulatory RNA OxySchromosome misc_RNA4156308 110 - 0.490909
partial chromosome repeat_region269430 565 + 0.446018
partial chromosome repeat_region279155 181 + 0.403315
partial chromosome repeat_region270930 822 + 0.540146
pheU b4134 tRNA-Phechromosome tRNA4360574 76 - 0.592105
pheV b2967 tRNA-Phechromosome tRNA3108388 76 + 0.592105
proK b3545 tRNA-Prochromosome tRNA3706639 77 - 0.61039
proL b2189 tRNA-Prochromosome tRNA2284233 77 + 0.662338
proM b3799 tRNA-Prochromosome tRNA3980758 77 + 0.623377
rdlA b4420 antisense RNA, trans-acting regulator of ldrA translationchromosome misc_RNA1268546 67 + 0.522388
rdlB b4422 antisense RNA, trans-acting regulator of ldrB translationchromosome misc_RNA1269081 66 + 0.5
rdlC b4424 antisense RNA, trans-acting regulator of ldrC translationchromosome misc_RNA1269616 68 + 0.485294
rdlD b4454 antisense RNA, trans-acting regulator of ldrD translationchromosome misc_RNA3698159 64 + 0.546875
rnpB b3123 RNase P, RNA component; M1 RNAchromosome misc_RNA3268238 377 - 0.618037
rprA b4431 RprA RNA; positive regulatory RNA for rpoS translationchromosome misc_RNA1768396 105 + 0.390476
rrfA b3855 5S ribosomal RNAchromosome rRNA4038540 120 + 0.625
rrfB b3971 5S ribosomal RNAchromosome rRNA4169660 120 + 0.633333
rrfC b3759 5S ribosomal RNAchromosome rRNA3944723 120 + 0.641667
rrfD b3274 5S ribosomal RNAchromosome rRNA3421690 120 - 0.641667
rrfE b4010 5S ribosomal RNAchromosome rRNA4211063 120 + 0.633333
rrfF b3272 5S ribosomal RNAchromosome rRNA3421445 120 - 0.616667
rrfG b2588 5S ribosomal RNAchromosome rRNA2724091 120 - 0.641667
rrfH b0205 5S ribosomal RNAchromosome rRNA228756 120 + 0.641667
rrlA b3854 23S ribosomal RNAchromosome rRNA4035542 2905 + 0.53253
rrlB b3970 23S ribosomal RNAchromosome rRNA4166664 2904 + 0.534091
rrlC b3758 23S ribosomal RNAchromosome rRNA3941727 2904 + 0.533058
rrlD b3275 23S ribosomal RNAchromosome rRNA3421902 2904 - 0.533402
rrlE b4009 23S ribosomal RNAchromosome rRNA4208066 2904 + 0.534091
rrlG b2589 23S ribosomal RNAchromosome rRNA2724303 2904 - 0.534091
rrlH b0204 23S ribosomal RNAchromosome rRNA225759 2904 + 0.532369
rrsA b3851 16S ribosomal RNAchromosome rRNA4033554 1542 + 0.54345
rrsB b3968 16S ribosomal RNAchromosome rRNA4164682 1542 + 0.544099
rrsC b3756 16S ribosomal RNAchromosome rRNA3939831 1542 + 0.544099
rrsD b3278 16S ribosomal RNAchromosome rRNA3425243 1542 - 0.545396
rrsE b4007 16S ribosomal RNAchromosome rRNA4206170 1542 + 0.544099
rrsG b2591 16S ribosomal RNAchromosome rRNA2727638 1542 - 0.546044
rrsH b0201 16S ribosomal RNAchromosome rRNA223771 1542 + 0.54345
rtT b4425 rtT RNA; may modulate the stringent responsechromosome misc_RNA1286289 171 - 0.578947
rybA b4416 unknown RNAchromosome misc_RNA852175 89 - 0.47191
rybB b4417 unknown RNAchromosome misc_RNA887199 79 - 0.455696
rydB b4430 unknown RNAchromosome misc_RNA1762737 68 - 0.529412
ryeA b4432 unknown RNAchromosome misc_RNA1921090 249 + 0.457831
ryeB b4433 unknown RNAchromosome misc_RNA1921188 121 - 0.46281
ryeC b4436 unknown RNAchromosome misc_RNA2151299 149 + 0.463087
ryeD b4437 unknown RNAchromosome misc_RNA2151634 143 + 0.482517
ryeE b4438 unknown RNAchromosome misc_RNA2165136 86 + 0.44186
ryfA b4440 unknown RNAchromosome misc_RNA2651877 304 + 0.526316
rygA b4444 unknown RNAchromosome misc_RNA2974124 88 - 0.5
rygB b4445 unknown RNAchromosome misc_RNA2974332 76 - 0.513158
rygC b4446 unknown RNAchromosome misc_RNA3054837 151 + 0.410596
rygD b4447 unknown RNAchromosome misc_RNA3192773 150 - 0.42
ryhA b4450 unknown RNAchromosome misc_RNA3348599 108 + 0.537037
ryhB b4451 regulatory RNA mediating Fur regulonchromosome misc_RNA3578946 94 - 0.510638
ryiA b4456 unknown RNAchromosome misc_RNA3984455 172 + 0.476744
ryjA b4459 unknown RNAchromosome misc_RNA4275950 140 - 0.521429
selC b3658 tRNA-Secchromosome tRNA3834245 95 + 0.642105
serT b0971 tRNA-Serchromosome tRNA1030848 88 - 0.602273
serU b1975 tRNA-Serchromosome tRNA2041492 90 - 0.633333
serV b2695 tRNA-Serchromosome tRNA2816575 93 - 0.645161
serW b0883 tRNA-Serchromosome tRNA925107 88 - 0.613636
serX b1032 tRNA-Serchromosome tRNA1096788 88 - 0.613636
sokB b4429 antisense RNA blocking mokB and hokB translationchromosome misc_RNA1490143 53 + 0.528302
sokC b4413 antisense RNA blocking mokC (orf69) and hokC (gef) translationchromosome misc_RNA16952 55 + 0.472727
spf b3864 Spot 42 RNAchromosome misc_RNA4047922 109 + 0.422018
sraB b4418 unknown RNAchromosome misc_RNA1145812 169 + 0.384615
sraD b4442 unknown RNAchromosome misc_RNA2812823 75 + 0.426667
sraF b4448 unknown RNAchromosome misc_RNA3236396 188 + 0.494681
sraG b4449 unknown RNAchromosome misc_RNA3309247 174 + 0.494253
ssrA b2621 10Sa RNA, non-ribosomal RNA, mediates tagging and proteolysis of incomplete polypeptideschromosome misc_RNA2753615 363 + 0.528926
ssrS b2911 6S RNAchromosome misc_RNA3054005 183 + 0.551913
t44 b4414 unknown RNAchromosome misc_RNA189712 136 + 0.507353
thrT b3979 tRNA-Thrchromosome tRNA4173777 76 + 0.539474
thrU b3976 tRNA-Thrchromosome tRNA4173411 76 + 0.513158
thrV b3273 tRNA-Thrchromosome tRNA3421602 76 - 0.565789
thrW b0244 tRNA-Thrchromosome tRNA262095 76 + 0.513158
tke1 b4441 unknown RNAchromosome misc_RNA2689214 149 - 0.510067
tke8 b4427 unknown RNAchromosome misc_RNA1435145 108 + 0.388889
trpT b3761 tRNA-Trpchromosome tRNA3944980 76 + 0.592105
tyrT b1231 tRNA-Tyrchromosome tRNA1286761 85 - 0.588235
tyrU b3977 tRNA-Tyrchromosome tRNA4173495 85 + 0.588235
tyrV b1230 tRNA-Tyrchromosome tRNA1286467 85 - 0.588235
valT b0744 tRNA-Valchromosome tRNA779988 76 + 0.618421
valU b2401 tRNA-Valchromosome tRNA2518953 76 + 0.618421
valV b1665 tRNA-Valchromosome tRNA1744459 77 + 0.532468
valW b1666 tRNA-Valchromosome tRNA1744540 77 + 0.61039
valX b2402 tRNA-Valchromosome tRNA2519073 76 + 0.618421
valY b2403 tRNA-Valchromosome tRNA2519195 76 + 0.618421
valZ b0746 tRNA-Valchromosome tRNA780291 76 + 0.618421
ycgH b4491 chromosome pseudo1218824 2622 + 0.432876
ycgH b4491 chromosome pseudo1218824 1521 + 0.384615
ydbA b4492 chromosome pseudo1463416 8622 + 0.495361
ydbA b4492 chromosome pseudo1463416 8622 + 0.495361
yedN b4495 chromosome pseudo2009372 522 - 0.354406
yedN b4495 chromosome pseudo2009372 192 - 0.317708
yedS b4496 chromosome pseudo2032045 516 + 0.453488
yedS b4496 chromosome pseudo2032045 1223 + 0.452167
yeeL b4497 chromosome pseudo2050300 1053 - 0.387464
yeeL b4497 chromosome pseudo2050300 1053 - 0.387464
yfaS b4500 chromosome pseudo2327820 4515 - 0.539313
yfaS b4500 chromosome pseudo2327820 4515 - 0.539313