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2024-05-05 17:26:09

Gene list

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COG category: NOT ANALYZED
Organism: Silicibacter pomeroyi DSS-3, DSS-3

Number of genes found: 96

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPO2558 chromosome pseudo2708816 1961 + 0.581846
NA SPO_tRNA-His-1 tRNA-Hischromosome tRNA1886364 77 + 0.597403
NA SPO2379 chromosome pseudo2522754 808 - 0.555693
NA SPO0121 chromosome pseudo129255 764 - 0.633508
NA SPO_tRNA-Ile-3 tRNA-Ilechromosome tRNA4014223 77 - 0.61039
NA SPO_tRNA-Arg-3 tRNA-Argchromosome tRNA537350 77 + 0.558442
NA SPO0969 chromosome pseudo1020727 613 - 0.659054
NA SPO_tRNA-Arg-5 tRNA-Argchromosome tRNA3892522 77 - 0.636364
NA SPO_tRNA-Val-3 tRNA-Valchromosome tRNA2766850 75 - 0.48
NA SPO_tRNA-Pro-3 tRNA-Prochromosome tRNA228692 77 - 0.623377
NA SPO1297 chromosome pseudo1360686 1342 + 0.623696
NA SPO_tRNA-Ser-2 tRNA-Serchromosome tRNA2046619 90 + 0.633333
NA SPO_tRNA-Asn-2 tRNA-Asnchromosome tRNA2310677 75 + 0.56
NA SPO0561 chromosome pseudo560279 1853 - 0.648138
NA SPO1653 chromosome pseudo1758541 788 - 0.56599
NA SPO_tRNA-Ala-1 tRNA-Alachromosome tRNA263730 76 + 0.592105
NA SPO_tRNA-Ser-5 tRNA-Serchromosome tRNA3871397 90 + 0.666667
NA SPO_tRNA-Gln-2 tRNA-Glnchromosome tRNA636094 75 + 0.56
NA SPO2973 chromosome pseudo3170068 453 - 0.576159
NA SPO_tRNA-Gly-6 tRNA-Glychromosome tRNA3206889 75 - 0.613333
NA SPO1296 chromosome pseudo1359755 1013 + 0.627838
NA SPO_tRNA-Met-4 tRNA-Metchromosome tRNA3701370 77 + 0.571429
NA SPO1248 chromosome pseudo1316312 1268 + 0.659306
NA SPO_tRNA-Asp-2 tRNA-Aspchromosome tRNA2755704 77 - 0.675325
NA SPO2732 chromosome pseudo2919428 621 + 0.663446
NA SPO0117 chromosome pseudo124395 1563 + 0.62508
NA SPO_tRNA-Leu-6 tRNA-Leuchromosome tRNA3985347 87 + 0.643678
NA SPO_tRNA-Val-2 tRNA-Valchromosome tRNA726006 76 - 0.526316
NA SPO_tRNA-Thr-2 tRNA-Thrchromosome tRNA1082915 76 + 0.565789
NA SPO0626 chromosome pseudo645850 1013 - 0.627838
NA SPO1706 chromosome pseudo1822082 903 - 0.624585
NA SPO0627 chromosome pseudo647663 731 - 0.543092
NA SPO2024 chromosome pseudo2151176 1042 - 0.648752
NA SPO_tRNA-Asp-1 tRNA-Aspchromosome tRNA2755575 77 - 0.675325
NA SPO_tRNA-Ile-1 tRNA-Ilechromosome tRNA263580 77 + 0.61039
NA SPO_tRNA-Leu-5 tRNA-Leuchromosome tRNA3207063 87 - 0.609195
NA SPO_tRNA-Gly-2 tRNA-Glychromosome tRNA1217181 75 - 0.586667
NA SPO_tRNA-Pro-2 tRNA-Prochromosome tRNA176312 78 + 0.615385
NA SPO_tRNA-Arg-4 tRNA-Argchromosome tRNA2140752 77 - 0.636364
NA SPO_tRNA-Ala-2 tRNA-Alachromosome tRNA3465737 76 - 0.592105
NA SPO2404 chromosome pseudo2554817 638 + 0.575235
NA SPO_tRNA-Asn-1 tRNA-Asnchromosome tRNA2251315 75 + 0.56
NA SPO_tRNA-Glu-2 tRNA-Gluchromosome tRNA1849403 75 - 0.586667
NA SPO2375 chromosome pseudo2520025 400 - 0.5975
NA SPOA0179 megaplasmid pseudo193336 872 + 0.583716
NA SPOA_tRNA-Phe-1 tRNA-Phemegaplasmid tRNA75805 75 + 0.626667
NA SPO_tRNA-Val-4 tRNA-Valchromosome tRNA3481060 75 + 0.56
NA SPO2254 chromosome pseudo2399395 663 - 0.68175
NA SPO_tRNA-Ala-3 tRNA-Alachromosome tRNA3827177 76 + 0.618421
NA SPO_tRNA-Ser-4 tRNA-Serchromosome tRNA2929931 90 - 0.611111
NA SPO_tRNA-Gly-5 tRNA-Glychromosome tRNA2173838 74 + 0.648649
NA SPO_tRNA-Leu-3 tRNA-Leuchromosome tRNA2251642 86 - 0.604651
NA SPO_tRNA-Thr-3 tRNA-Thrchromosome tRNA2140232 76 - 0.605263
NA SPO0630 chromosome pseudo651392 362 - 0.60221
NA SPO_tRNA-Glu-3 tRNA-Gluchromosome tRNA1849667 75 - 0.586667
NA SPO0625 chromosome pseudo644590 1342 - 0.623696
NA SPO_tRNA-Leu-4 tRNA-Leuchromosome tRNA2429430 84 - 0.619048
NA SPO_tRNA-Pro-5 tRNA-Prochromosome tRNA2645397 77 + 0.688312
NA SPO2402 chromosome pseudo2552507 788 - 0.56599
NA SPO2391 chromosome pseudo2538104 638 - 0.575235
NA SPO_tRNA-Ala-4 tRNA-Alachromosome tRNA4014074 76 - 0.592105
NA SPO_tRNA-Lys-2 tRNA-Lyschromosome tRNA294934 76 + 0.539474
NA SPO_tRNA-Gln-1 tRNA-Glnchromosome tRNA176231 76 + 0.592105
NA SPO_tRNA-Cys-2 tRNA-Cyschromosome tRNA1307509 74 - 0.608108
NA SPOA0092 megaplasmid pseudo92502 138 + 0.594203
NA SPO_SptmRNA1 sRNAchromosome misc_RNA2032300 312 - 0.583333
NA SPO2728 chromosome pseudo2913938 3965 - 0.685246
NA SPO3904 chromosome pseudo3188456 535 - 0.628037
NA SPO_tRNA-Met-2 tRNA-Metchromosome tRNA2308217 76 + 0.578947
NA SPO_tRNA-Leu-2 tRNA-Leuchromosome tRNA1458077 87 + 0.62069
NA SPO_tRNA-Ser-3 tRNA-Serchromosome tRNA2119397 90 + 0.644444
NA SPO1654 chromosome pseudo1760043 981 - 0.624873
NA SPO_SprnpB1 sRNAchromosome misc_RNA3163914 341 - 0.668622
NA SPO_tRNA-Arg-2 tRNA-Argchromosome tRNA485387 77 - 0.558442
NA SPO_tRNA-Trp-2 tRNA-Trpchromosome tRNA758890 76 + 0.605263
NA SPO_tRNA-Gly-4 tRNA-Glychromosome tRNA1218081 75 - 0.586667
NA SPO_tRNA-Met-5 tRNA-Metchromosome tRNA4010290 77 - 0.597403
NA SPO2478 chromosome pseudo2628409 1381 + 0.682114
NA SPO3061 chromosome pseudo3271806 1284 + 0.675234
NA SPO_tRNA-Pro-4 tRNA-Prochromosome tRNA2274996 77 - 0.662338
NA SPOA_tRNA-Thr-1 tRNA-Thrmegaplasmid tRNA147302 75 - 0.56
NA SPO_tRNA-Met-3 tRNA-Metchromosome tRNA3461953 77 - 0.597403
NA SPO2360 chromosome pseudo2501991 1228 + 0.638436
NA SPO_tRNA-Ile-2 tRNA-Ilechromosome tRNA3465886 77 - 0.61039
NA SPO_tRNA-Pseudo-2 chromosome tRNA1205683 84 - 0.678571
NA SPO_tRNA-Gly-3 tRNA-Glychromosome tRNA1217973 75 - 0.586667
frdA SPOA0308 megaplasmid pseudo338501 1477 - 0.60325
rrfD SPO_Sp5SD 5S ribosomal RNAchromosome rRNA267353 118 + 0.618644
rrfE SPO_Sp5SE 5S ribosomal RNAchromosome rRNA3462072 118 - 0.618644
rrfF SPO_Sp5SF 5S ribosomal RNAchromosome rRNA4010409 118 - 0.618644
rrlA SPO_Sp23SA 23S ribosomal RNAchromosome rRNA264255 2895 + 0.545078
rrlB SPO_Sp23SB 23S ribosomal RNAchromosome rRNA3462393 2895 - 0.545078
rrlC SPO_Sp23SC 23S ribosomal RNAchromosome rRNA4010730 2895 - 0.545078
rrsA SPO_Sp16SA 16S ribosomal RNAchromosome rRNA261910 1455 + 0.560137
rrsB SPO_Sp16SB 16S ribosomal RNAchromosome rRNA3466178 1455 - 0.560137
rrsC SPO_Sp16SC 16S ribosomal RNAchromosome rRNA4014515 1455 - 0.560137