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2024-05-03 10:52:43

Gene list

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COG category: NOT ANALYZED
Organism: Mycobacterium bovis AF2122/97, AF2122/97

Number of genes found: 231

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Mycobacterium bovis AF2122/97, AF2122/97
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA chromosome repeat_unit3079736 36 - 0.611111
NA chromosome repeat_unit1029782 48 - 0.583333
NA chromosome repeat_unit3078719 36 - 0.611111
NA chromosome repeat_unit3078997 36 - 0.611111
NA chromosome repeat_unit1280189 4 + 0.5
NA chromosome repeat_unit3080029 36 - 0.611111
NA chromosome repeat_unit3077001 3 + 1
NA chromosome repeat_unit3076404 36 - 0.611111
NA chromosome repeat_unit3078359 3 + 1
NA chromosome repeat_unit3244939 54 + 0.62963
NA chromosome repeat_unit1027345 15 - 0.466667
NA chromosome repeat_unit3076330 36 - 0.611111
NA chromosome repeat_unit3079664 36 - 0.611111
NA REP-3 chromosome repeat_region1252988 1356 - 0.648968
NA chromosome repeat_unit3513123 63 - 0.555556
NA chromosome repeat_unit1171129 15 - 0.6
NA chromosome repeat_unit3079074 36 - 0.611111
NA chromosome repeat_unit1027507 49 + 0.489796
NA chromosome repeat_unit3079952 36 - 0.611111
NA chromosome repeat_unit3076475 36 - 0.611111
NA chromosome repeat_unit3077004 28 + 0.678571
NA chromosome repeat_unit3079369 36 - 0.611111
NA chromosome repeat_unit3078493 36 - 0.611111
NA chromosome repeat_unit3080103 36 - 0.611111
NA chromosome repeat_unit3247098 54 - 0.555556
NA chromosome repeat_unit4189149 27 + 0.555556
NA chromosome repeat_unit1343978 8 + 0.5
NA chromosome repeat_unit3079880 36 - 0.611111
NA chromosome repeat_unit3079221 36 - 0.611111
NA chromosome repeat_unit3075735 36 - 0.611111
NA chromosome repeat_unit1025924 15 + 0.466667
NA REP-5 chromosome repeat_region1773873 1363 - 0.668379
NA chromosome repeat_unit1279219 17 + 0.529412
NA chromosome repeat_unit1029811 17 - 0.352941
NA chromosome repeat_unit3247152 5 + 0.6
NA REP-7 chromosome repeat_region2187623 1362 + 0.649046
NA chromosome repeat_unit3078362 16 - 0.5
NA chromosome repeat_unit3076984 20 - 0.7
NA chromosome repeat_unit2939498 15 + 0.6
NA REP-6 chromosome repeat_region1912553 1379 - 0.66715
NA chromosome repeat_unit3078863 36 - 0.611111
NA chromosome repeat_unit3076183 36 - 0.611111
NA chromosome repeat_unit3079146 36 - 0.611111
NA chromosome repeat_unit3079440 36 - 0.611111
NA chromosome repeat_unit3079295 36 - 0.611111
NA chromosome repeat_unit4012903 49 + 0.510204
NA chromosome repeat_unit4017023 13 - 0.615385
NA DR_region chromosome repeat_region3075735 4404 - 0.616485
NA chromosome repeat_unit1342581 15 + 0.6
NA REP-2 chromosome repeat_region103748 1504 - 0.655585
NA chromosome repeat_unit4015743 13 + 0.615385
NA chromosome repeat_unit3078418 36 - 0.611111
NA chromosome repeat_unit3079515 36 - 0.611111
NA chromosome repeat_unit4014972 49 - 0.489796
NA chromosome repeat_unit3339308 8 + 0.75
NA chromosome repeat_unit1279215 4 + 0.5
NA chromosome repeat_unit3076621 36 - 0.611111
NA chromosome repeat_unit2690027 13 - 0.461538
NA chromosome repeat_unit1343890 15 - 0.6
NA chromosome repeat_unit3752268 2 + 0.5
NA chromosome repeat_unit3078566 36 - 0.611111
NA chromosome repeat_unit2688829 13 + 0.538462
NA chromosome repeat_unit3337911 15 + 0.6
NA chromosome repeat_unit3439308 8 + 0.625
NA chromosome repeat_unit3078331 28 - 0.678571
NA chromosome repeat_unit3076032 36 - 0.583333
NA chromosome repeat_unit1466189 20 + 0.6
NA chromosome repeat_unit1990240 14 - 0.642857
NA chromosome repeat_unit3078642 36 - 0.583333
NA chromosome repeat_unit1280173 16 - 0.5625
NA chromosome repeat_unit4190616 27 - 0.555556
NA chromosome repeat_unit3076109 36 - 0.611111
NA chromosome repeat_unit3753813 25 - 0.32
NA chromosome repeat_unit3439255 15 - 0.6
NA chromosome repeat_unit3076257 36 - 0.611111
NA chromosome repeat_unit3244934 5 + 0.6
NA chromosome repeat_unit1169820 15 + 0.6
NA chromosome repeat_unit3337865 8 + 0.75
NA chromosome repeat_unit1989024 14 + 0.571429
NA chromosome repeat_unit3079589 36 - 0.611111
NA chromosome repeat_unit3292474 6 - 0.5
NA chromosome repeat_unit3076765 36 - 0.611111
NA chromosome repeat_unit3752270 25 + 0.36
NA chromosome repeat_unit3075806 36 - 0.611111
NA chromosome repeat_unit3753838 2 + 0.5
NA chromosome repeat_unit3076913 36 - 0.611111
NA chromosome repeat_unit2795329 15 + 0.6
NA chromosome repeat_unit3437865 8 + 0.625
NA chromosome repeat_unit2796638 15 - 0.6
NA chromosome repeat_unit3075953 36 - 0.611111
NA chromosome repeat_unit3511796 63 + 0.571429
NA chromosome repeat_unit3076548 36 - 0.611111
NA chromosome repeat_unit3075879 36 - 0.611111
NA chromosome repeat_unit3078936 36 - 0.611111
NA chromosome repeat_unit1342535 8 + 0.5
NA REP'-1 chromosome repeat_region80272 315 + 0.64127
NA REP-4 chromosome repeat_region1277672 1449 - 0.643202
NA REP-8 chromosome repeat_region3831221 1393 + 0.66906
NA chromosome repeat_unit3076693 36 - 0.611111
NA chromosome repeat_unit3290455 6 + 0.5
NA chromosome repeat_unit3339220 15 - 0.6
NA chromosome repeat_unit3078791 36 - 0.611111
NA chromosome repeat_unit1467669 20 - 0.65
NA chromosome repeat_unit3079807 36 - 0.611111
NA chromosome repeat_unit1027526 17 + 0.352941
NA chromosome repeat_unit3437946 15 + 0.6
NA chromosome repeat_unit3076839 36 - 0.611111
IS-LIKE IS-LIKE-2 chromosome repeat_region1279215 978 + 0.645194
IS-LIKE IS-LIKE-1 chromosome repeat_region1165019 979 - 0.643514
IS1081 IS1081'-4 chromosome repeat_region2939425 929 + 0.655544
IS1081 IS1081-5 chromosome repeat_region3337873 1435 - 0.655052
IS1081 IS1081-1 chromosome repeat_region1169747 1435 + 0.655052
IS1081 IS1081-6 chromosome repeat_region3437873 1435 + 0.655052
IS1081 IS1081-2 chromosome repeat_region1342543 1435 - 0.654355
IS1081 IS1081-3 chromosome repeat_region2795291 1435 - 0.655052
IS1533 IS1533 chromosome repeat_region3244939 2213 + 0.659738
IS1534 IS1534 chromosome repeat_region4012903 2118 + 0.646837
IS1535 IS1535 chromosome repeat_region1027507 2323 + 0.665949
IS1536 IS1536 chromosome repeat_region702629 1384 + 0.653902
IS1537 IS1537 chromosome repeat_region4237816 1873 - 0.650828
IS1538 IS1538 chromosome repeat_region3290455 2025 - 0.653827
IS1539 IS1539 chromosome repeat_region3150681 2268 - 0.651235
IS1540 IS1540'-1 chromosome repeat_region1932189 175 + 0.617143
IS1540 IS1540-2 chromosome repeat_region3795344 1164 - 0.652062
IS1547 IS1547-2 chromosome repeat_region3668986 1086 + 0.665746
IS1547 IS1547-1 chromosome repeat_region891218 1092 + 0.665751
IS1552 IS1552 chromosome repeat_region3796998 845 - 0.647337
IS1553 IS1553 chromosome repeat_region4015743 1293 - 0.645012
IS1554 IS1554 chromosome repeat_region1025924 1436 - 0.626045
IS1555 IS1555' chromosome repeat_region3072296 399 - 0.641604
IS1556 IS1556 chromosome repeat_region2324842 1469 + 0.636487
IS1557 IS1557'-1 chromosome repeat_region834176 517 + 0.618955
IS1557 IS1557'-3 chromosome repeat_region4189149 1494 + 0.655288
IS1557 IS1557-2 chromosome repeat_region1466189 1500 - 0.655333
IS1558 IS1558-2 chromosome repeat_region2688829 1211 - 0.650702
IS1558 IS1558'-1 chromosome repeat_region2418179 804 - 0.640547
IS1560 IS1560-2 chromosome repeat_region3752270 1568 + 0.653699
IS1560 IS1560'-1 chromosome repeat_region1159368 1513 - 0.676801
IS1561 IS1561' chromosome repeat_region3707825 741 - 0.692308
IS1602 IS1602 chromosome repeat_region3056724 2032 + 0.663386
IS1603 IS1603 chromosome repeat_region3511796 1390 - 0.628058
IS1604 IS1604' chromosome repeat_region3073369 1407 + 0.683013
IS1605 IS1605' chromosome repeat_region922405 288 + 0.663194
IS1606 IS1606' chromosome repeat_region948066 331 + 0.622356
IS1607 IS1607 chromosome repeat_region2239359 1228 + 0.703583
IS1608 IS1608'-1 chromosome repeat_region3706864 1030 + 0.639806
IS1608 IS1608'-2 chromosome repeat_region4254615 1030 + 0.638835
IS6110 IS6110 chromosome repeat_region3077004 1355 - 0.642066
ISB9 ISB9' chromosome repeat_region1989024 1230 - 0.610569
Mb0025 Mb0025 PUTATIVE SECRETED PROTEIN P60-RELATED PROTEIN [SECOND PART]chromosome pseudo28918 270 + 0.651852
Mb0075 Mb0075 PROBABLE GLUTAMINE-TRANSPORT PROTEIN ABC TRANSPORTER GLNQchromosome pseudo82491 213 + 0.666667
Mb0139-1 Mb0139-1 chromosome pseudo161962 384 + 0.671875
Mb0139-2 Mb0139-2 chromosome pseudo162345 108 + 0.62037
Mb0139-3 Mb0139-3 chromosome pseudo162454 240 + 0.670833
Mb0139-4 Mb0139-4 chromosome pseudo162696 168 + 0.678571
Mb0171c Mb0171c POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY)chromosome pseudo194334 180 - 0.711111
Mb0563c Mb0563c CONSERVED HYPOTHETICAL PROTEIN [SECOND PART]chromosome pseudo641472 138 - 0.673913
Mb1070c Mb1070c PUTATIVE IS LIKE-2 TRANSPOSASEchromosome pseudo1165019 552 - 0.643116
Mb1181 Mb1181 POSSIBLE TRANSPOSASE (FRAGMENT)chromosome pseudo1279641 549 + 0.64663
Mb1404 Mb1404 PROBABLE CONSERVED MEMBRANE PROTEINchromosome pseudo1540036 954 + 0.600629
Mb1408 Mb1408 GLYCOLIPID SULFOTRANSFERASE [SECOND PART]chromosome pseudo1543153 519 + 0.651252
Mb2111 Mb2111 HYPOTHETICAL PROTEINchromosome pseudo2324512 333 + 0.66967
Mb2452c Mb2452c chromosome pseudo2693723 306 - 0.663399
Mb2453c Mb2453c chromosome pseudo2694029 201 - 0.666667
Mb3929c Mb3929c CONSERVED HYPOTHETICAL PROTEINchromosome pseudo4318597 744 - 0.736559
PE_PGRS3b Mb0284c PE-PGRS FAMILY PROTEIN [SECOND PART]chromosome pseudo331762 243 - 0.72428
PE_PGRS42b Mb2513c PE-PGRS FAMILY PROTEIN [SECOND PART]chromosome pseudo2762605 1173 - 0.761296
PE_PGRS42d Mb2512c PE-PGRS FAMILY PROTEIN [THIRD PART]chromosome pseudo2762102 825 - 0.752727
PE_PGRS50b Mb3376c PE-PGRS FAMILY PROTEIN [SECOND PART]chromosome pseudo3690679 4014 - 0.783009
PE_PGRS6b Mb0546 PE-PGRS FAMILY PROTEIN [SECOND PART]chromosome pseudo625594 228 + 0.741228
PPE17b Mb1200c PPE FAMILY PROTEIN [SECOND PART]chromosome pseudo1300139 543 - 0.668508
PPE33b Mb1839 PPE FAMILY PROTEIN [SECOND PART]chromosome pseudo2042301 849 + 0.645465
PPE35b Mb1952c PPE FAMILY PROTEINchromosome pseudo2159283 1005 - 0.59801
PPE55b Mb3379c PPE FAMILY PROTEIN [SECOND PART]chromosome pseudo3697245 3186 - 0.641557
PPE56b Mb3384c PPE FAMILY PROTEIN [SECOND PART]chromosome pseudo3713132 6135 - 0.638957
PPE56d Mb3383c PPE FAMILY PROTEIN [THIRD PART]chromosome pseudo3709479 3660 - 0.662295
PPE66 Mb3765c PPE FAMILY PROTEINchromosome pseudo4126745 357 - 0.694678
alaT alaT chromosome tRNA11112 73 + 0.616438
alaU alaU chromosome tRNA3388387 73 - 0.657534
alaV alaV chromosome tRNA1113962 73 + 0.60274
argT argT chromosome tRNA1025787 73 - 0.643836
argU argU chromosome tRNA4153159 73 - 0.575342
argV argV chromosome tRNA1444242 73 - 0.684932
argW argW chromosome tRNA2760978 74 + 0.621622
asnT asnT chromosome tRNA2597004 73 - 0.60274
aspT aspT chromosome tRNA924940 74 + 0.72973
cysU cysU chromosome tRNA2937317 71 + 0.647887
glnT glnT chromosome tRNA1138523 72 - 0.541667
glnU glnU chromosome tRNA3305219 72 - 0.513889
glpKb Mb3721c PROBABLE GLYCEROL KINASE GLPKB [SECOND PART] (ATP:GLYCEROL 3-PHOSPHOTRANSFERASE)(GLYCEROKINASE) (GK)chromosome pseudo4075549 981 - 0.64526
gluT gluT chromosome tRNA924829 74 + 0.648649
gluU gluU chromosome tRNA3305107 73 - 0.69863
glyT glyT chromosome tRNA2937215 73 + 0.616438
glyU glyU chromosome tRNA387234 71 - 0.535211
glyV glyV chromosome tRNA2733704 71 + 0.619718
hisT hisT chromosome tRNA2794651 73 + 0.575342
ileT ileT chromosome tRNA10887 74 + 0.594595
leuT leuT chromosome tRNA25625 83 + 0.674699
leuU leuU chromosome tRNA2382501 86 + 0.627907
leuV leuV chromosome tRNA1813381 74 - 0.594595
leuW leuW chromosome tRNA1510763 84 + 0.583333
leuX leuX chromosome tRNA1177844 74 + 0.594595
lysT lysT chromosome tRNA924633 73 - 0.575342
lysU lysU chromosome tRNA2802291 73 + 0.60274
mce2Db Mb0608 MCE-FAMILY PROTEIN MCE2DB [SECOND PART]chromosome pseudo693129 144 + 0.736111
metT metT chromosome tRNA732839 74 + 0.567568
metU metU chromosome tRNA3513905 74 - 0.648649
metV metV chromosome tRNA2559359 74 - 0.675676
pheU pheU chromosome tRNA925043 74 + 0.662162
proT proT chromosome tRNA1931953 74 + 0.608108
proU proU chromosome tRNA2733494 74 - 0.635135
proY proY chromosome tRNA4063888 74 + 0.675676
recBb Mb0646c PROBABLE EXONUCLEASE V (BETA CHAIN) RECBB [SECOND PART] (EXODEOXYRIBONUCLEASE V BETA CHAIN)(EXODEOXYRIBONUCLEASE V POLYPEPTIDE)chromosome pseudo722975 705 - 0.687943
rnpB rnpB ribonuclease P RNAchromosome misc_RNA2479592 307 - 0.644951
rrf rrf ribosomal RNA 5Schromosome rRNA1474935 115 + 0.643478
rrl rrl ribosomal RNA 23Schromosome rRNA1471694 3138 + 0.571702
rrs rrs ribosomal RNA 16Schromosome rRNA1469882 1537 + 0.578399
serT serT chromosome tRNA4153262 89 - 0.629214
serU serU chromosome tRNA4158876 87 - 0.643678
serV serV chromosome tRNA4105805 86 + 0.639535
serX serX chromosome tRNA4135425 87 - 0.655172
sigMb Mb3942 POSSIBLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGMb [SECOND PART]chromosome pseudo4334626 189 + 0.708995
ssr ssr 10Sa RNAchromosome misc_RNA3424360 607 - 0.614498
thrT thrT chromosome tRNA732730 73 + 0.561644
thrU thrU chromosome tRNA4018602 73 - 0.534247
thrV thrV chromosome tRNA852832 72 - 0.583333
trpT trpT chromosome tRNA734760 73 + 0.616438
tyrT tyrT chromosome tRNA659352 81 + 0.617284
valT valT chromosome tRNA2936959 72 - 0.680556
valU valU chromosome tRNA2937404 72 + 0.597222
valV valV chromosome tRNA2489746 72 - 0.666667