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2024-05-03 09:28:57

Gene list

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COG category: NOT ANALYZED
Organism: Vibrio parahaemolyticus RIMD 2210633, O3:K6

Number of genes found: 175

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA chromosome 2 misc_feature1333151 300 + 0.45
NA chromosome 2 misc_feature1450244 360 + 0.441667
NA chromosome 2 misc_feature984128 282 - 0.471631
NA chromosome 2 misc_feature1367261 848 - 0.459906
NA chromosome 1 misc_feature3122580 1126 + 0.417407
NA chromosome 1 misc_feature1446889 3268 + 0.414627
NA chromosome 2 misc_feature1394090 276 + 0.431159
NA chromosome 1 misc_feature140860 162 + 0.432099
NA chromosome 1 misc_feature2524121 177 + 0.40678
NA chromosome 2 misc_feature1451492 438 - 0.47032
NA chromosome 2 misc_feature1388675 882 - 0.459184
NA chromosome 2 misc_feature1444496 228 + 0.399123
NA chromosome 2 misc_feature900053 1087 + 0.441582
NA chromosome 1 misc_feature1359132 555 + 0.472072
NA chromosome 2 misc_feature1401133 315 + 0.450794
16Sa 16S ribosomal RNAchromosome 1 rRNA33633 1471 + 0.538409
16Sb 16S ribosomal RNAchromosome 1 rRNA581626 1471 + 0.539769
16Sd 16S ribosomal RNAchromosome 1 rRNA2779817 1471 - 0.538409
16Se 16S ribosomal RNAchromosome 1 rRNA2885630 1471 - 0.539769
16Sf 16S ribosomal RNAchromosome 1 rRNA3066302 1471 - 0.538409
16Sg 16S ribosomal RNAchromosome 1 rRNA3071548 1471 - 0.538409
16Si 16S ribosomal RNAchromosome 1 rRNA3131721 1471 - 0.539089
16Si 16S ribosomal RNAchromosome 1 rRNA3136967 1471 - 0.538409
16Sj 16S ribosomal RNAchromosome 1 rRNA3196944 1471 - 0.538409
16Sk 16S ribosomal RNAchromosome 1 rRNA3238281 1471 - 0.538409
16Sl 16S ribosomal RNAchromosome 2 rRNA132915 1471 + 0.538409
23Sa 23S ribosomal RNAchromosome 1 rRNA35852 2891 + 0.517468
23Sb 23S ribosomal RNAchromosome 1 rRNA583703 2891 + 0.51816
23Sd 23S ribosomal RNAchromosome 1 rRNA2776323 2891 - 0.518506
23Se 23S ribosomal RNAchromosome 1 rRNA2882229 2891 - 0.519198
23Sf 23S ribosomal RNAchromosome 1 rRNA3062626 2891 - 0.517468
23Sg 23S ribosomal RNAchromosome 1 rRNA3068300 2891 - 0.517468
23Sh 23S ribosomal RNAchromosome 1 rRNA3128473 2891 - 0.517468
23Si 23S ribosomal RNAchromosome 1 rRNA3133719 2891 - 0.517468
23Sj 23S ribosomal RNAchromosome 1 rRNA3193447 2894 - 0.517623
23Sk 23S ribosomal RNAchromosome 1 rRNA3234642 2891 - 0.518506
23Sl 23S ribosomal RNAchromosome 2 rRNA135166 2891 + 0.517122
5Sa 5S ribosomal RNAchromosome 1 rRNA38832 120 + 0.533333
5Sb 5S ribosomal RNAchromosome 1 rRNA586683 120 + 0.533333
5Sc 5S ribosomal RNAchromosome 1 rRNA2775764 121 - 0.520661
5Sd 5S ribosomal RNAchromosome 1 rRNA2776114 120 - 0.525
5Se 5S ribosomal RNAchromosome 1 rRNA2882020 120 - 0.533333
5Sf 5S ribosomal RNAchromosome 1 rRNA3062417 120 - 0.525
5Sg 5S ribosomal RNAchromosome 1 rRNA3068091 120 - 0.525
5Sh 5S ribosomal RNAchromosome 1 rRNA3128264 120 - 0.533333
5Si 5S ribosomal RNAchromosome 1 rRNA3133510 120 - 0.525
5Sj 5S ribosomal RNAchromosome 1 rRNA3193238 120 - 0.533333
5Sk 5S ribosomal RNAchromosome 1 rRNA3234433 120 - 0.533333
5Sl 5S ribosomal RNAchromosome 2 rRNA138146 120 + 0.533333
tRNA-Ala-1 tRNA-Alachromosome 1 tRNA583274 76 + 0.605263
tRNA-Ala-2 tRNA-Alachromosome 1 tRNA2779478 76 - 0.644737
tRNA-Ala-3 tRNA-Alachromosome 1 tRNA3065871 76 - 0.644737
tRNA-Ala-4 tRNA-Alachromosome 1 tRNA3196605 76 - 0.644737
tRNA-Ala-5 tRNA-Alachromosome 2 tRNA134725 76 + 0.618421
tRNA-Arg-1 tRNA-Argchromosome 1 tRNA50014 77 + 0.597403
tRNA-Arg-10 tRNA-Argchromosome 1 tRNA2687583 77 - 0.61039
tRNA-Arg-11 tRNA-Argchromosome 1 tRNA2687870 77 - 0.61039
tRNA-Arg-2 tRNA-Argchromosome 1 tRNA804917 77 - 0.623377
tRNA-Arg-3 tRNA-Argchromosome 1 tRNA912549 77 + 0.545455
tRNA-Arg-4 tRNA-Argchromosome 1 tRNA2686780 77 - 0.61039
tRNA-Arg-5 tRNA-Argchromosome 1 tRNA2686914 77 - 0.61039
tRNA-Arg-6 tRNA-Argchromosome 1 tRNA2687048 77 - 0.61039
tRNA-Arg-7 tRNA-Argchromosome 1 tRNA2687182 77 - 0.61039
tRNA-Arg-8 tRNA-Argchromosome 1 tRNA2687316 77 - 0.61039
tRNA-Arg-9 tRNA-Argchromosome 1 tRNA2687450 77 - 0.61039
tRNA-Asn-1 tRNA-Asnchromosome 1 tRNA2210208 76 + 0.539474
tRNA-Asn-2 tRNA-Asnchromosome 1 tRNA2770456 76 + 0.592105
tRNA-Asn-3 tRNA-Asnchromosome 1 tRNA2770805 76 + 0.592105
tRNA-Asn-4 tRNA-Asnchromosome 1 tRNA2773237 76 + 0.592105
tRNA-Asn-5 tRNA-Asnchromosome 1 tRNA2773443 76 + 0.565789
tRNA-Asp-1 tRNA-Aspchromosome 1 tRNA586831 77 + 0.662338
tRNA-Asp-2 tRNA-Aspchromosome 1 tRNA2775658 77 - 0.662338
tRNA-Asp-3 tRNA-Aspchromosome 1 tRNA2881915 77 - 0.662338
tRNA-Asp-4 tRNA-Aspchromosome 1 tRNA3062312 77 - 0.662338
tRNA-Asp-5 tRNA-Aspchromosome 1 tRNA3128159 77 - 0.662338
tRNA-Asp-6 tRNA-Aspchromosome 1 tRNA3234328 77 - 0.662338
tRNA-Cys-1 tRNA-Cyschromosome 1 tRNA2034566 74 - 0.648649
tRNA-Cys-2 tRNA-Cyschromosome 2 tRNA1040086 74 - 0.648649
tRNA-Cys-3 tRNA-Cyschromosome 2 tRNA1052570 74 - 0.648649
tRNA-Cys-4 tRNA-Cyschromosome 2 tRNA1061052 74 - 0.648649
tRNA-Gln-1 tRNA-Glnchromosome 1 tRNA772106 75 - 0.6
tRNA-Gln-2 tRNA-Glnchromosome 1 tRNA772712 75 - 0.6
tRNA-Gln-3 tRNA-Glnchromosome 1 tRNA773192 75 - 0.6
tRNA-Gln-4 tRNA-Glnchromosome 1 tRNA773435 75 - 0.6
tRNA-Gln-5 tRNA-Glnchromosome 1 tRNA773659 75 - 0.573333
tRNA-Gln-6 tRNA-Glnchromosome 1 tRNA774213 75 - 0.573333
tRNA-Glu-1 tRNA-Gluchromosome 1 tRNA35273 76 + 0.618421
tRNA-Glu-2 tRNA-Gluchromosome 1 tRNA583362 76 + 0.618421
tRNA-Glu-3 tRNA-Gluchromosome 1 tRNA2885385 76 - 0.618421
tRNA-Glu-4 tRNA-Gluchromosome 1 tRNA3066057 76 - 0.618421
tRNA-Glu-5 tRNA-Gluchromosome 1 tRNA3238036 76 - 0.618421
tRNA-Glu-6 tRNA-Gluchromosome 2 tRNA134557 76 + 0.618421
tRNA-Gly-1 tRNA-Glychromosome 1 tRNA2034204 76 - 0.565789
tRNA-Gly-10 tRNA-Glychromosome 1 tRNA2989992 76 - 0.565789
tRNA-Gly-11 tRNA-Glychromosome 1 tRNA3122269 75 - 0.573333
tRNA-Gly-12 tRNA-Glychromosome 2 tRNA1060973 76 - 0.565789
tRNA-Gly-13 tRNA-Glychromosome 2 tRNA1156216 75 + 0.573333
tRNA-Gly-2 tRNA-Glychromosome 1 tRNA2034453 76 - 0.565789
tRNA-Gly-3 tRNA-Glychromosome 1 tRNA2988743 76 - 0.565789
tRNA-Gly-4 tRNA-Glychromosome 1 tRNA2988949 76 - 0.565789
tRNA-Gly-5 tRNA-Glychromosome 1 tRNA2989075 76 - 0.565789
tRNA-Gly-6 tRNA-Glychromosome 1 tRNA2989200 76 - 0.565789
tRNA-Gly-7 tRNA-Glychromosome 1 tRNA2989325 76 - 0.565789
tRNA-Gly-8 tRNA-Glychromosome 1 tRNA2989563 76 - 0.565789
tRNA-Gly-9 tRNA-Glychromosome 1 tRNA2989785 76 - 0.565789
tRNA-His-1 tRNA-Hischromosome 1 tRNA50123 76 + 0.552632
tRNA-His-2 tRNA-Hischromosome 1 tRNA50397 76 + 0.552632
tRNA-Ile-1 tRNA-Ilechromosome 1 tRNA2779595 77 - 0.584416
tRNA-Ile-2 tRNA-Ilechromosome 1 tRNA3196722 77 - 0.584416
tRNA-Leu-1 tRNA-Leuchromosome 1 tRNA771968 85 - 0.564706
tRNA-Leu-10 tRNA-Leuchromosome 1 tRNA773897 85 - 0.564706
tRNA-Leu-11 tRNA-Leuchromosome 1 tRNA2034290 87 - 0.586207
tRNA-Leu-12 tRNA-Leuchromosome 1 tRNA2582588 84 - 0.559524
tRNA-Leu-13 tRNA-Leuchromosome 1 tRNA2790320 85 - 0.576471
tRNA-Leu-14 tRNA-Leuchromosome 2 tRNA192979 84 - 0.559524
tRNA-Leu-15 tRNA-Leuchromosome 2 tRNA1040232 87 - 0.609195
tRNA-Leu-16 tRNA-Leuchromosome 2 tRNA1052717 87 - 0.609195
tRNA-Leu-2 tRNA-Leuchromosome 1 tRNA772228 85 - 0.541176
tRNA-Leu-3 tRNA-Leuchromosome 1 tRNA772342 85 - 0.552941
tRNA-Leu-4 tRNA-Leuchromosome 1 tRNA772575 85 - 0.564706
tRNA-Leu-5 tRNA-Leuchromosome 1 tRNA772816 85 - 0.541176
tRNA-Leu-6 tRNA-Leuchromosome 1 tRNA773055 85 - 0.564706
tRNA-Leu-7 tRNA-Leuchromosome 1 tRNA773296 85 - 0.564706
tRNA-Leu-8 tRNA-Leuchromosome 1 tRNA773539 85 - 0.552941
tRNA-Leu-9 tRNA-Leuchromosome 1 tRNA773782 85 - 0.541176
tRNA-Lys-1 tRNA-Lyschromosome 1 tRNA35351 76 + 0.5
tRNA-Lys-2 tRNA-Lyschromosome 1 tRNA3065979 76 - 0.5
tRNA-Lys-3 tRNA-Lyschromosome 1 tRNA3237958 76 - 0.5
tRNA-Lys-4 tRNA-Lyschromosome 2 tRNA134635 76 + 0.5
tRNA-Met-1 tRNA-Metchromosome 1 tRNA403769 76 - 0.565789
tRNA-Met-10 tRNA-Metchromosome 1 tRNA2989669 77 - 0.649351
tRNA-Met-11 tRNA-Metchromosome 1 tRNA2989880 77 - 0.623377
tRNA-Met-2 tRNA-Metchromosome 1 tRNA772474 77 - 0.532468
tRNA-Met-3 tRNA-Metchromosome 1 tRNA772954 77 - 0.532468
tRNA-Met-4 tRNA-Metchromosome 1 tRNA774059 77 - 0.532468
tRNA-Met-5 tRNA-Metchromosome 1 tRNA774442 77 - 0.532468
tRNA-Met-6 tRNA-Metchromosome 1 tRNA2582455 77 - 0.649351
tRNA-Met-7 tRNA-Metchromosome 1 tRNA2988610 77 - 0.649351
tRNA-Met-8 tRNA-Metchromosome 1 tRNA2988837 77 - 0.623377
tRNA-Met-9 tRNA-Metchromosome 1 tRNA2989431 77 - 0.649351
tRNA-Phe-1 tRNA-Phechromosome 1 tRNA2770086 76 + 0.592105
tRNA-Phe-2 tRNA-Phechromosome 1 tRNA2770310 76 + 0.565789
tRNA-Phe-3 tRNA-Phechromosome 1 tRNA2770686 76 + 0.565789
tRNA-Phe-4 tRNA-Phechromosome 1 tRNA2773013 76 + 0.592105
tRNA-Pro-1 tRNA-Prochromosome 1 tRNA50271 77 + 0.597403
tRNA-Pro-2 tRNA-Prochromosome 1 tRNA50497 77 + 0.597403
tRNA-Pro-3 tRNA-Prochromosome 1 tRNA789515 77 + 0.597403
tRNA-Ser-1 tRNA-Serchromosome 1 tRNA1121082 88 + 0.545455
tRNA-Ser-2 tRNA-Serchromosome 1 tRNA2239837 91 + 0.494505
tRNA-Ser-3 tRNA-Serchromosome 1 tRNA2687978 92 - 0.597826
tRNA-Ser-4 tRNA-Serchromosome 1 tRNA3193080 91 - 0.494505
tRNA-Ser-5 tRNA-Serchromosome 2 tRNA138333 91 + 0.494505
tRNA-Ser-6 tRNA-Serchromosome 2 tRNA605006 91 - 0.494505
tRNA-Thr-1 tRNA-Thrchromosome 1 tRNA2770227 76 + 0.513158
tRNA-Thr-2 tRNA-Thrchromosome 1 tRNA2770603 76 + 0.513158
tRNA-Thr-3 tRNA-Thrchromosome 1 tRNA2773140 76 + 0.513158
tRNA-Thr-4 tRNA-Thrchromosome 1 tRNA2773352 76 + 0.513158
tRNA-Thr-5 tRNA-Thrchromosome 1 tRNA2775940 76 - 0.539474
tRNA-Thr-6 tRNA-Thrchromosome 1 tRNA3122180 76 - 0.539474
tRNA-Thr-7 tRNA-Thrchromosome 1 tRNA3122500 76 - 0.513158
tRNA-Trp-1 tRNA-Trpchromosome 1 tRNA586943 77 + 0.571429
tRNA-Trp-2 tRNA-Trpchromosome 1 tRNA3062167 77 - 0.571429
tRNA-Tyr-1 tRNA-Tyrchromosome 1 tRNA978106 85 - 0.623529
tRNA-Tyr-2 tRNA-Tyrchromosome 1 tRNA978272 85 - 0.623529
tRNA-Tyr-3 tRNA-Tyrchromosome 1 tRNA978438 85 - 0.623529
tRNA-Tyr-4 tRNA-Tyrchromosome 1 tRNA978604 85 - 0.623529
tRNA-Tyr-5 tRNA-Tyrchromosome 1 tRNA978770 85 - 0.611765
tRNA-Tyr-6 tRNA-Tyrchromosome 1 tRNA978936 85 - 0.623529
tRNA-Tyr-7 tRNA-Tyrchromosome 1 tRNA3122379 85 - 0.611765
tRNA-Val-1 tRNA-Valchromosome 1 tRNA35457 76 + 0.618421
tRNA-Val-2 tRNA-Valchromosome 1 tRNA1437460 77 + 0.623377
tRNA-Val-3 tRNA-Valchromosome 1 tRNA1437569 77 + 0.584416
tRNA-Val-4 tRNA-Valchromosome 1 tRNA3065781 76 - 0.618421
tRNA-Val-5 tRNA-Valchromosome 1 tRNA3237852 76 - 0.618421
tRNA-Val-6 tRNA-Valchromosome 2 tRNA134814 76 + 0.618421