Gene list
Applied filters:
COG category: Cell motility
Genomic element: chromosome
Number of genes found: 179
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| Saccharophagus degradans 2-40, 2-40 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Sde_2211 | flagellar basal-body rod modification protein FlgD | chromosome | CDS | 2814658 | 717 | - | 0.458856 |
| NA | Sde_2215 | putative chemotaxis protein | chromosome | CDS | 2817531 | 951 | - | 0.44795 |
| NA | Sde_0497 | secretion protein SecB | chromosome | CDS | 609463 | 507 | + | 0.473373 |
| NA | Sde_2060 | GTP cyclohydrolase I | chromosome | CDS | 2639418 | 432 | - | 0.465278 |
| NA | Sde_2188 | flagellar M-ring protein | chromosome | CDS | 2783820 | 1671 | - | 0.482346 |
| NA | Sde_2167 | flagellar biosynthesis protein FlhA | chromosome | CDS | 2760513 | 2268 | - | 0.468254 |
| NA | Sde_2185 | Sodium-transporting two-sector ATPase | chromosome | CDS | 2780271 | 1377 | - | 0.488017 |
| NA | Sde_3561 | Sigma-70 factor | chromosome | CDS | 4521203 | 537 | - | 0.454376 |
| NA | Sde_2562 | Uridylate kinase | chromosome | CDS | 3251953 | 615 | - | 0.442276 |
| NA | Sde_0576 | Signal peptidase I | chromosome | CDS | 713185 | 699 | + | 0.439199 |
| NA | Sde_2043 | Folylpolyglutamate synthetase | chromosome | CDS | 2570187 | 726 | + | 0.38292 |
| NA | Sde_2155 | Flagellar FliF M-ring protein | chromosome | CDS | 2747606 | 486 | - | 0.436214 |
| NA | Sde_1362 | Sodium:galactoside symporter | chromosome | CDS | 1762431 | 1194 | - | 0.458961 |
| NA | Sde_0856 | TonB-dependent receptor | chromosome | CDS | 1111093 | 2754 | + | 0.485113 |
| NA | Sde_0897 | Translation elongation factor G | chromosome | CDS | 1160074 | 1833 | - | 0.479542 |
| NA | Sde_2189 | conserved hypothetical protein | chromosome | CDS | 2785603 | 366 | - | 0.467213 |
| NA | Sde_1139 | MSHA biogenesis protein MshG | chromosome | CDS | 1475694 | 1221 | + | 0.473382 |
| NA | Sde_1662 | ATPase | chromosome | CDS | 2130225 | 330 | + | 0.457576 |
| NA | Sde_3107 | putative CheA signal transduction histidine kinases | chromosome | CDS | 3968940 | 2421 | - | 0.452706 |
| NA | Sde_2816 | hypothetical protein | chromosome | CDS | 3554580 | 396 | + | 0.462121 |
| NA | Sde_2208 | Recombination protein O, RecO | chromosome | CDS | 2810436 | 786 | - | 0.440204 |
| NA | Sde_0521 | hypothetical protein | chromosome | CDS | 644639 | 588 | - | 0.518707 |
| NA | Sde_2557 | Peptidase M50, putative membrane-associated zinc metallopeptidase | chromosome | CDS | 3244083 | 438 | - | 0.465753 |
| NA | Sde_3303 | conserved hypothetical protein | chromosome | CDS | 4213551 | 879 | + | 0.485779 |
| NA | Sde_3862 | hypothetical protein | chromosome | CDS | 4866601 | 1749 | - | 0.475129 |
| NA | Sde_2202 | Adenylate kinase, subfamily | chromosome | CDS | 2800877 | 1743 | - | 0.452094 |
| NA | Sde_2186 | Flagellar biosynthesis/type III secretory pathway protein-like | chromosome | CDS | 2781634 | 1050 | - | 0.46381 |
| NA | Sde_2558 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | chromosome | CDS | 3244539 | 5145 | - | 0.446064 |
| NA | Sde_0364 | putative secretion pathway ATPase | chromosome | CDS | 450196 | 1779 | + | 0.515458 |
| NA | Sde_0918 | secretion protein SecE | chromosome | CDS | 1184003 | 366 | + | 0.437158 |
| NA | Sde_0355 | Branched-chain amino acid aminotransferase I | chromosome | CDS | 439547 | 405 | + | 0.469136 |
| NA | Sde_3631 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 4609052 | 2196 | - | 0.493625 |
| NA | Sde_2817 | biopolymer transport protein (ExbD2) | chromosome | CDS | 3554980 | 408 | + | 0.448529 |
| NA | Sde_3573 | general secretion pathway protein K | chromosome | CDS | 4533269 | 1065 | - | 0.461972 |
| NA | Sde_3597 | MCP methyltransferase, CheR-type | chromosome | CDS | 4556332 | 1128 | - | 0.507979 |
| NA | Sde_2205 | RelA/SpoT protein | chromosome | CDS | 2807603 | 957 | - | 0.421108 |
| NA | Sde_2169 | flagellar biosynthetic protein FlhB | chromosome | CDS | 2764217 | 1131 | - | 0.458886 |
| NA | Sde_3580 | Helix-turn-helix, AraC type | chromosome | CDS | 4539252 | 2001 | - | 0.45977 |
| NA | Sde_1144 | MSHA biogenesis protein MshO | chromosome | CDS | 1478956 | 849 | + | 0.473498 |
| NA | Sde_2815 | Biopolymer transport proteins-like | chromosome | CDS | 3553189 | 1395 | + | 0.460215 |
| NA | Sde_2196 | putative flagellar protein | chromosome | CDS | 2792701 | 393 | - | 0.43257 |
| NA | Sde_2206 | cysteine synthase B | chromosome | CDS | 2808560 | 1140 | - | 0.472807 |
| NA | Sde_0511 | regulatory protein TypA | chromosome | CDS | 626843 | 1827 | + | 0.469622 |
| NA | Sde_1343 | Type II secretory pathway component PulD-like | chromosome | CDS | 1737171 | 1641 | + | 0.437538 |
| NA | Sde_1929 | outer membrane efflux protein | chromosome | CDS | 2430413 | 1344 | + | 0.473214 |
| NA | Sde_1200 | metal dependent phosphohydrolase | chromosome | CDS | 1544697 | 1281 | - | 0.458236 |
| NA | Sde_3225 | Peptidyl-tRNA hydrolase | chromosome | CDS | 4099825 | 510 | + | 0.52549 |
| NA | Sde_3581 | general secretion pathway protein C | chromosome | CDS | 4541255 | 972 | - | 0.488683 |
| NA | Sde_3219 | Glutamyl-tRNA reductase | chromosome | CDS | 4096459 | 762 | - | 0.485564 |
| NA | Sde_0354 | Lipid A export ATP-binding/permease protein MsbA | chromosome | CDS | 438986 | 528 | + | 0.479167 |
| NA | Sde_0133 | Uncharacterized protein involved in exopolysaccharide biosynthesis-like | chromosome | CDS | 164554 | 1524 | + | 0.410105 |
| NA | Sde_3630 | Protein-glutamate O-methyltransferase | chromosome | CDS | 4608179 | 849 | - | 0.477032 |
| NA | Sde_0055 | Hemolysin activation/secretion protein-like | chromosome | CDS | 60987 | 1602 | + | 0.54432 |
| NA | Sde_3046 | conserved hypothetical protein | chromosome | CDS | 3894877 | 3033 | + | 0.440488 |
| NA | Sde_2158 | putative transcriptional regulator, Fis family | chromosome | CDS | 2750505 | 867 | - | 0.482122 |
| NA | Sde_3576 | hypothetical protein | chromosome | CDS | 4535379 | 564 | - | 0.445035 |
| NA | Sde_0862 | type IV pilus biogenesis protein PilC | chromosome | CDS | 1117788 | 1218 | - | 0.458128 |
| NA | Sde_1108 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 1432992 | 1620 | + | 0.501235 |
| NA | Sde_0671 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 856178 | 1596 | + | 0.461153 |
| NA | Sde_2531 | biopolymer transport protein | chromosome | CDS | 3203452 | 429 | - | 0.477855 |
| NA | Sde_3849 | hypothetical protein | chromosome | CDS | 4851331 | 735 | - | 0.421769 |
| NA | Sde_2316 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 2942664 | 1647 | + | 0.460231 |
| NA | Sde_2214 | Peptidase S1C, Do | chromosome | CDS | 2816612 | 858 | - | 0.420746 |
| NA | Sde_3103 | CheD, stimulates methylation of MCP proteins | chromosome | CDS | 3964422 | 657 | - | 0.450533 |
| NA | Sde_2216 | Flagellar basal body P-ring biosynthesis protein-like | chromosome | CDS | 2818634 | 732 | + | 0.483607 |
| NA | Sde_2172 | Mannosyl-glycoproteinendo-beta-N-acetylglucosamidase | chromosome | CDS | 2766521 | 843 | - | 0.408066 |
| NA | Sde_3577 | ATPase | chromosome | CDS | 4535967 | 441 | - | 0.44898 |
| NA | Sde_3106 | Biotin synthase | chromosome | CDS | 3968360 | 564 | - | 0.452128 |
| NA | Sde_2209 | GTP-binding protein Era | chromosome | CDS | 2811281 | 750 | - | 0.462667 |
| NA | Sde_2162 | chemotaxis protein CheZ | chromosome | CDS | 2755593 | 801 | - | 0.434457 |
| NA | Sde_1077 | Type II secretory pathway component PulF-like | chromosome | CDS | 1378007 | 978 | + | 0.436605 |
| NA | Sde_0023 | Filamentous haemagglutinin-like | chromosome | CDS | 26674 | 1200 | + | 0.499167 |
| NA | Sde_2203 | Flagellin and related hook-associated proteins-like | chromosome | CDS | 2803220 | 1599 | - | 0.447154 |
| NA | Sde_2716 | secretion protein SecG | chromosome | CDS | 3443786 | 390 | - | 0.428205 |
| NA | Sde_2246 | serine/threonine protein kinase | chromosome | CDS | 2852574 | 1800 | - | 0.453333 |
| NA | Sde_1135 | MSHA biogenesis protein MshL | chromosome | CDS | 1469959 | 1632 | + | 0.449755 |
| NA | Sde_2910 | hypothetical protein | chromosome | CDS | 3689245 | 2901 | - | 0.433299 |
| NA | Sde_2688 | type 4 fimbrial biogenesis protein PilP | chromosome | CDS | 3413377 | 495 | - | 0.470707 |
| NA | Sde_1653 | type 4 fimbrial biogenesis protein PilZ | chromosome | CDS | 2121407 | 354 | + | 0.474576 |
| NA | Sde_1136 | MSHA biogenesis protein MshM | chromosome | CDS | 1471611 | 891 | + | 0.454545 |
| NA | Sde_3105 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 3966012 | 2304 | - | 0.456163 |
| NA | Sde_1293 | Poly(R)-hydroxyalkanoic acid synthase, class I | chromosome | CDS | 1658124 | 1293 | + | 0.463264 |
| NA | Sde_0979 | SecY protein | chromosome | CDS | 1253932 | 1344 | + | 0.446429 |
| NA | Sde_2207 | Hpt sensor hybrid histidine kinase | chromosome | CDS | 2809713 | 693 | - | 0.464646 |
| NA | Sde_3425 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 4359956 | 1257 | - | 0.455052 |
| NA | Sde_0861 | Phosphoribosylformylglycinamidine cyclo-ligase | chromosome | CDS | 1116889 | 897 | - | 0.474916 |
| NA | Sde_2532 | Peptidase A8, signal peptidase II | chromosome | CDS | 3203887 | 696 | - | 0.479885 |
| NA | Sde_4014 | 60 kDa inner membrane protein | chromosome | CDS | 5054707 | 1674 | - | 0.439068 |
| NA | Sde_3628 | chemotaxis response regulator | chromosome | CDS | 4600194 | 942 | - | 0.488323 |
| NA | Sde_3466 | hypothetical protein | chromosome | CDS | 4407660 | 441 | - | 0.37415 |
| NA | Sde_3111 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 3973850 | 1194 | + | 0.443049 |
| NA | Sde_0519 | putative CheA signal transduction histidine kinases | chromosome | CDS | 639377 | 3090 | - | 0.493528 |
| NA | Sde_2197 | cyclic nucleotide-binding domain (cNMP-BD) protein | chromosome | CDS | 2793385 | 405 | - | 0.417284 |
| NA | Sde_2449 | Outer membrane protein-like | chromosome | CDS | 3096455 | 1434 | - | 0.495816 |
| NA | Sde_2956 | hypothetical protein | chromosome | CDS | 3758250 | 510 | - | 0.407843 |
| NA | Sde_2059 | Modification methylase HemK | chromosome | CDS | 2638327 | 1086 | - | 0.452118 |
| NA | Sde_3579 | Glycoside hydrolase, family | chromosome | CDS | 4537735 | 1512 | - | 0.501984 |
| NA | Sde_3766 | cation efflux system protein | chromosome | CDS | 4766007 | 1248 | + | 0.487179 |
| NA | Sde_2968 | CorC/HlyC family of putative transporters | chromosome | CDS | 3771561 | 1284 | - | 0.442368 |
| NA | Sde_3629 | putative CheA signal transduction histidine kinases | chromosome | CDS | 4601147 | 7011 | - | 0.493225 |
| NA | Sde_3857 | putative cytoplasmic protein | chromosome | CDS | 4860275 | 1134 | - | 0.393298 |
| NA | Sde_2213 | GTP-binding protein LepA | chromosome | CDS | 2815895 | 405 | - | 0.471605 |
| NA | Sde_1078 | pilin | chromosome | CDS | 1378984 | 489 | + | 0.470348 |
| NA | Sde_2171 | Flagellar hook-associated protein | chromosome | CDS | 2766155 | 270 | - | 0.444444 |
| NA | Sde_2623 | putative lauroyl acyltransferase | chromosome | CDS | 3319370 | 993 | - | 0.514602 |
| NA | Sde_2173 | Flagellar biogenesis protein-like | chromosome | CDS | 2767365 | 480 | - | 0.441667 |
| NA | Sde_2175 | Flagellar basal body rod protein | chromosome | CDS | 2768363 | 1002 | - | 0.451098 |
| NA | Sde_3640 | twitching motility protein PilT | chromosome | CDS | 4617304 | 1035 | - | 0.520773 |
| NA | Sde_2174 | surface presentation of antigens (SpoA) protein | chromosome | CDS | 2767963 | 408 | - | 0.465686 |
| NA | Sde_0081 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 102146 | 1635 | - | 0.488073 |
| NA | Sde_2484 | putative TonB system transport protein ExbD2 | chromosome | CDS | 3137030 | 414 | - | 0.454106 |
| NA | Sde_1916 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 2417656 | 876 | + | 0.421233 |
| NA | Sde_1346 | Glyceraldehyde-3-phosphate dehydrogenase, type I | chromosome | CDS | 1742450 | 1203 | + | 0.408978 |
| NA | Sde_3575 | general secretion pathway protein I | chromosome | CDS | 4534966 | 375 | - | 0.432 |
| NA | Sde_0864 | Peptidase S49, protease IV | chromosome | CDS | 1121089 | 420 | + | 0.430952 |
| NA | Sde_1869 | Glutaminyl-tRNA synthetase | chromosome | CDS | 2359984 | 201 | + | 0.40796 |
| NA | Sde_3172 | toluene-tolerance protein | chromosome | CDS | 4048498 | 612 | - | 0.455882 |
| NA | Sde_2198 | Flagellar capping protein-like | chromosome | CDS | 2793976 | 2079 | - | 0.42328 |
| NA | Sde_2273 | hypothetical protein | chromosome | CDS | 2890211 | 1137 | + | 0.398417 |
| NA | Sde_1033 | putative oxidoreductase chain Cj0415 | chromosome | CDS | 1321308 | 1725 | - | 0.467826 |
| NA | Sde_2210 | Ribonuclease III | chromosome | CDS | 2812204 | 2415 | - | 0.469151 |
| NA | Sde_1342 | MSHA biogenesis protein MshM | chromosome | CDS | 1736251 | 924 | + | 0.457792 |
| NA | Sde_2170 | flagellar biosynthetic protein FliR | chromosome | CDS | 2765364 | 786 | - | 0.426209 |
| NA | Sde_2565 | Integrins alpha chain | chromosome | CDS | 3254190 | 453 | - | 0.472406 |
| NA | Sde_0366 | putative secretion protein | chromosome | CDS | 452979 | 1365 | - | 0.502564 |
| NA | Sde_2177 | Flagellar hook-length control protein-like | chromosome | CDS | 2770177 | 1458 | - | 0.48834 |
| NA | Sde_1389 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 1795423 | 660 | - | 0.480303 |
| NA | Sde_1622 | putative peptidase | chromosome | CDS | 2086468 | 990 | + | 0.481818 |
| NA | Sde_3639 | Orotate phosphoribosyl transferase | chromosome | CDS | 4616127 | 1143 | - | 0.511811 |
| NA | Sde_3632 | twitching motility protein PilI | chromosome | CDS | 4611398 | 540 | - | 0.509259 |
| NA | Sde_0343 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 426525 | 1644 | - | 0.457421 |
| NA | Sde_0014 | lipid A biosynthesis lauroyl acyltransferase | chromosome | CDS | 16846 | 888 | + | 0.506757 |
| NA | Sde_3572 | Chitinase II | chromosome | CDS | 4532020 | 1236 | - | 0.477346 |
| NA | Sde_2187 | flagellar motor switch protein FliG | chromosome | CDS | 2782783 | 1041 | - | 0.45245 |
| NA | Sde_1138 | type II secretory pathway, ATPase | chromosome | CDS | 1473946 | 1749 | + | 0.472842 |
| NA | Sde_2695 | Carbamoyl-phosphate synthase, large subunit, glutamine-dependent | chromosome | CDS | 3421590 | 1101 | - | 0.46049 |
| NA | Sde_2166 | flagellar biosynthetic protein FlhF | chromosome | CDS | 2758897 | 1584 | - | 0.510732 |
| NA | Sde_3584 | Flagellar basal body-associated protein-like | chromosome | CDS | 4544914 | 486 | - | 0.506173 |
| NA | Sde_0353 | TonB system biopolymer transport component | chromosome | CDS | 437591 | 1383 | + | 0.449747 |
| NA | Sde_2561 | Ribosome recycling factor | chromosome | CDS | 3251480 | 471 | - | 0.464968 |
| NA | Sde_2199 | Bacitracin resistance protein BacA | chromosome | CDS | 2796311 | 399 | - | 0.43609 |
| NA | Sde_3563 | ATPase | chromosome | CDS | 4522382 | 663 | - | 0.463047 |
| NA | Sde_1958 | Aconitate hydratase 1 | chromosome | CDS | 2463117 | 1269 | - | 0.532703 |
| NA | Sde_1148 | general secretion pathway protein A | chromosome | CDS | 1485654 | 1692 | - | 0.478723 |
| NA | Sde_3226 | conserved hypothetical protein | chromosome | CDS | 4100324 | 774 | + | 0.435401 |
| NA | Sde_0514 | hypothetical protein | chromosome | CDS | 631453 | 903 | - | 0.425249 |
| NA | Sde_2200 | flagellin FliC | chromosome | CDS | 2796811 | 1764 | - | 0.459751 |
| NA | Sde_2204 | MazG | chromosome | CDS | 2804831 | 2763 | - | 0.434672 |
| NA | Sde_3104 | Biotin biosynthesis protein BioC | chromosome | CDS | 3965081 | 858 | - | 0.431235 |
| NA | Sde_3102 | Dethiobiotin synthase | chromosome | CDS | 3963364 | 1047 | - | 0.48042 |
| NA | Sde_1202 | transcription elongation factor GreB | chromosome | CDS | 1547130 | 1488 | + | 0.491935 |
| NA | Sde_2529 | tolB protein | chromosome | CDS | 3201338 | 1338 | - | 0.461883 |
| NA | Sde_2485 | Phospholipid/glycerol acyltransferase | chromosome | CDS | 3137669 | 426 | - | 0.438967 |
| NA | Sde_3574 | general secretion pathway protein J | chromosome | CDS | 4534335 | 639 | - | 0.458529 |
| NA | Sde_2245 | Signal peptidase I | chromosome | CDS | 2851635 | 867 | - | 0.445213 |
| NA | Sde_2161 | putative CheA signal transduction histidine kinases | chromosome | CDS | 2753278 | 2304 | - | 0.480035 |
| NA | Sde_2160 | Protein-glutamate methylesterase | chromosome | CDS | 2752142 | 1098 | - | 0.471767 |
| NA | Sde_1407 | secretion protein SecD | chromosome | CDS | 1823239 | 1869 | + | 0.454789 |
| NA | Sde_0391 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 487335 | 1500 | - | 0.469333 |
| NA | Sde_2687 | Peptidase M41, FtsH | chromosome | CDS | 3411190 | 2184 | - | 0.452381 |
| NA | Sde_1608 | Endopeptidase Clp | chromosome | CDS | 2067298 | 639 | + | 0.455399 |
| NA | Sde_2016 | Cell surface receptor IPT/TIG | chromosome | CDS | 2539292 | 1098 | - | 0.428051 |
| NA | Sde_2159 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 2751386 | 741 | - | 0.460189 |
| NA | Sde_1408 | preprotein translocase subunit SecF | chromosome | CDS | 1825152 | 954 | + | 0.458071 |
| NA | Sde_2690 | periplasmic sensor signal transduction histidine kinase | chromosome | CDS | 3414540 | 564 | - | 0.423759 |
| NA | Sde_2061 | MotA/TolQ/ExbB proton channel | chromosome | CDS | 2639863 | 630 | - | 0.466667 |
| NA | Sde_0520 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 642481 | 2136 | - | 0.484082 |
| NA | Sde_2689 | Protein of unknown function UPF0044 | chromosome | CDS | 3413924 | 615 | - | 0.419512 |
| NA | Sde_0393 | CheC, inhibitor of MCP methylation | chromosome | CDS | 490145 | 612 | - | 0.47549 |
| NA | Sde_2957 | Biopolymer transport proteins-like | chromosome | CDS | 3758775 | 729 | - | 0.452675 |
| NA | Sde_1345 | ATPases involved in pili biogenesis, PilB-like | chromosome | CDS | 1740751 | 1692 | + | 0.426123 |
| NA | Sde_0863 | type 4 fimbrial biogenesis protein PilB | chromosome | CDS | 1119009 | 1722 | - | 0.455285 |
| NA | Sde_2176 | flagellar basal body-associated protein FliL | chromosome | CDS | 2769378 | 543 | - | 0.430939 |
| NA | Sde_3369 | TonB-like | chromosome | CDS | 4297215 | 279 | + | 0.46595 |
| NA | Sde_3218 | Peptide chain release factor 1 | chromosome | CDS | 4095439 | 990 | - | 0.479798 |
| NA | Sde_3112 | putative methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 3975225 | 3090 | + | 0.445955 |
| NA | Sde_3578 | TonB-dependent siderophore receptor | chromosome | CDS | 4536478 | 1236 | - | 0.482201 |
| NA | Sde_0154 | 2-keto-gluconate dehydrogenase subunit-like | chromosome | CDS | 190549 | 1428 | - | 0.461485 |
| NA | Sde_2212 | Peptidase S26A, signal peptidase I | chromosome | CDS | 2815433 | 435 | - | 0.482759 |
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