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2024-05-18 20:49:07

Gene list

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COG category: Cell motility
Genomic element: chromosome

Number of genes found: 128

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SO0111 hypothetical proteinchromosome CDS121746 615 - 0.458537
SO0132 flagellar protein FliL, putativechromosome CDS140742 411 + 0.46472
SO0189 fibronectin type III domain proteinchromosome CDS192488 7569 + 0.512221
SO0281 type IV pilus biogenesis protein PilMchromosome CDS288762 1080 + 0.448148
SO0282 type IV pilus biogenesis protein PilNchromosome CDS289829 585 + 0.42906
SO0283 type IV pilus biogenesis protein PilOchromosome CDS290410 621 + 0.399356
SO0284 type IV pilus biogenesis protein PilPchromosome CDS291030 516 + 0.422481
SO0415 type IV pilus biogenesis protein PilCchromosome CDS430085 1272 - 0.477201
SO0416 type IV pilus biogenesis protein PilBchromosome CDS431608 1710 - 0.489474
SO0417 pilin, putativechromosome CDS433391 417 - 0.446043
SO0500 methyl-accepting chemotaxis proteinchromosome CDS525133 1632 - 0.49326
SO0670 hypothetical proteinchromosome CDS688755 894 - 0.410515
SO0851 hypothetical proteinchromosome CDS873944 558 - 0.476703
SO0853 pilin, putativechromosome CDS874887 435 - 0.466667
SO0854 type IV pilin, putativechromosome CDS875323 372 - 0.489247
SO0987 methyl-accepting chemotaxis proteinchromosome CDS1015101 1665 + 0.449249
SO1028 hypothetical proteinchromosome CDS1065663 213 + 0.347418
SO1056 methyl-accepting chemotaxis proteinchromosome CDS1094947 1893 - 0.471738
SO1144 methyl-accepting chemotaxis proteinchromosome CDS1187307 1089 - 0.431589
SO1278 methyl-accepting chemotaxis proteinchromosome CDS1328993 2121 + 0.455446
SO1434 methyl-accepting chemotaxis proteinchromosome CDS1495729 1632 - 0.405024
SO2083 methyl-accepting chemotaxis proteinchromosome CDS2178871 1518 - 0.461133
SO2117 methyl-accepting chemotaxis proteinchromosome CDS2221890 1134 + 0.415344
SO2123 methyl-accepting chemotaxis proteinchromosome CDS2228055 1965 + 0.450891
SO2240 methyl-accepting chemotaxis proteinchromosome CDS2355819 1638 - 0.454212
SO2323 methyl-accepting chemotaxis proteinchromosome CDS2432836 1941 + 0.415765
SO2546 conserved hypothetical proteinchromosome CDS2680365 573 - 0.396161
SO2677 conserved hypothetical proteinchromosome CDS2801187 582 + 0.512028
SO2807 hypothetical proteinchromosome CDS2930446 303 + 0.432343
SO3052 methyl-accepting chemotaxis proteinchromosome CDS3164464 1740 - 0.458046
SO3203 CheW domain proteinchromosome CDS3343186 981 - 0.439348
SO3207 chemotaxis proteinchromosome CDS3346681 2277 - 0.471673
SO3237 flagellinchromosome CDS3375781 819 - 0.440781
SO3238 flagellinchromosome CDS3376855 822 - 0.420925
SO3253 flagellar basal-body P-ring formation protein FlgA, putativechromosome CDS3390904 708 + 0.408192
SO3282 methyl-accepting chemotaxis proteinchromosome CDS3422537 2004 + 0.458583
SO3314 fimbrial biogenesis and twitching motility protein, putativechromosome CDS3466069 789 - 0.463878
SO3477 pilin biogenesis protein-related proteinchromosome CDS3622553 1791 - 0.481854
SO3510 methyl-accepting chemotaxis protein, putativechromosome CDS3662623 975 - 0.459487
SO3520 type IV pilus biogenesis protein, putativechromosome CDS3674719 513 + 0.405458
SO3521 type IV pilus biogenesis protein, putativechromosome CDS3675517 495 + 0.40202
SO3525 type IV pilin biogenesis protein, putativechromosome CDS3678173 3507 - 0.406045
SO3526 hypothetical proteinchromosome CDS3681683 462 - 0.458874
SO3527 hypothetical proteinchromosome CDS3682156 939 - 0.404686
SO3582 methyl-accepting chemotaxis proteinchromosome CDS3748521 1626 + 0.434809
SO3642 methyl-accepting chemotaxis proteinchromosome CDS3800833 2022 + 0.457468
SO3838 methyl-accepting chemotaxis proteinchromosome CDS3987645 1863 - 0.428878
SO3890 methyl-accepting chemotaxis proteinchromosome CDS4035586 1590 - 0.446541
SO3905 conserved hypothetical proteinchromosome CDS4052946 696 - 0.449713
SO3915 conserved hypothetical proteinchromosome CDS4061643 465 + 0.425806
SO4010 hypothetical proteinchromosome CDS4153665 144 + 0.423611
SO4053 methyl-accepting chemotaxis proteinchromosome CDS4205753 1905 + 0.499213
SO4121 hypothetical proteinchromosome CDS4279454 1038 - 0.467245
SO4454 methyl-accepting chemotaxis proteinchromosome CDS4643423 1929 + 0.485744
SO4466 methyl-accepting chemotaxis proteinchromosome CDS4654062 1956 - 0.473415
SO4476 spheroplast protein y precursor, putativechromosome CDS4664291 492 - 0.473577
SO4557 methyl-accepting chemotaxis proteinchromosome CDS4753426 1872 - 0.501603
SO4579 fimbrial protein, putativechromosome CDS4773582 561 - 0.449198
SO4635 methyl-accepting chemotaxis proteinchromosome CDS4830958 1977 + 0.498735
cheA chemotaxis protein CheAchromosome CDS2225414 2109 + 0.432907
cheB-1 protein-glutamate methylesterase CheBchromosome CDS2231476 1056 + 0.467803
cheB-2 protein-glutamate methylesterase CheBchromosome CDS2436780 1071 + 0.482726
cheB-3 protein-glutamate methylesterase CheBchromosome CDS3345536 1125 - 0.468444
cheD-1 chemotaxis protein CheDchromosome CDS2230846 627 + 0.408293
cheD-2 chemotaxis protein CheD, putativechromosome CDS2436161 600 + 0.403333
cheR-1 chemotaxis protein methyltransferase CheRchromosome CDS2230038 834 + 0.42446
cheR-2 chemotaxis protein methyltransferase CheRchromosome CDS3388836 840 - 0.430952
cheR-3 chemotaxis protein methyltransferase CheRchromosome CDS2435323 828 + 0.385266
cheV-1 chemotaxis protein CheVchromosome CDS2091375 945 + 0.446561
cheV-2 chemotaxis protein CheVchromosome CDS3250827 900 - 0.48
cheV-3 chemotaxis protein CheVchromosome CDS3389778 921 - 0.422367
cheW-1 purine-binding chemotaxis protein CheWchromosome CDS2227537 513 + 0.442495
cheW-2 purine-binding chemotaxis protein CheWchromosome CDS2434790 537 + 0.417132
cheW-3 purine-binding chemotaxis protein CheWchromosome CDS3342684 495 - 0.428283
cheZ chemotaxis protein CheZchromosome CDS3348973 738 - 0.429539
flaG flagellin FlaGchromosome CDS3375265 360 - 0.430556
flgB flagellar basal-body rod protein FlgBchromosome CDS3388288 405 - 0.434568
flgC flagellar basal-body rod protein FlgCchromosome CDS3387869 417 - 0.441247
flgD basal-body rod modification protein FlgDchromosome CDS3387065 762 - 0.437008
flgE flagellar hook protein FlgEchromosome CDS3385636 1362 - 0.465492
flgF flagellar basal-body rod protein FlgFchromosome CDS3384720 744 - 0.491935
flgG flagellar basal-body rod protein FlgGchromosome CDS3383921 789 - 0.470215
flgH flagellar L-ring protein FlgHchromosome CDS3383234 675 - 0.475556
flgI flagellar P-ring protein FlgIchromosome CDS3382131 1092 - 0.477106
flgJ flagellar protein FlgJchromosome CDS3380959 1155 - 0.471861
flgL flagellar hook-associated protein FlgLchromosome CDS3377772 1212 - 0.445545
flgM negative regulator of flagellin synthesis FlgMchromosome CDS3391687 321 + 0.429907
flgN flagellar biosynthetic protein FlgNchromosome CDS3392017 426 + 0.415493
flhA flagellar biosynthesis protein FlhAchromosome CDS3353135 2100 - 0.463333
flhB flagellar biosynthetic protein FlhBchromosome CDS3355612 1131 - 0.471264
flhF flagellar biosynthetic protein FlhFchromosome CDS3351747 1377 - 0.46841
fliD flagellar hook-associated protein FliDchromosome CDS3373852 1371 - 0.420861
fliE flagellar hook-basal body complex protein FliEchromosome CDS3368304 339 - 0.433628
fliF flagellar M-ring protein FliFchromosome CDS3366570 1662 - 0.487966
fliG flagellar motor switch protein FliGchromosome CDS3365531 1047 - 0.454632
fliH flagellar assembly protein FliHchromosome CDS3364594 951 - 0.474238
fliI flagellum-specific ATP synthase FliIchromosome CDS3363288 1338 - 0.523916
fliJ flagellar protein FliJchromosome CDS3362833 444 - 0.445946
fliK flagellar hook-length control protein FliKchromosome CDS3361106 1584 - 0.454545
fliL flagellar protein FliLchromosome CDS3360499 525 - 0.481905
fliM flagellar motor switch protein FliMchromosome CDS3359428 1032 - 0.466085
fliN flagellar motor switch protein FliNchromosome CDS3359041 375 - 0.485333
fliO flagellar protein FliOchromosome CDS3358599 408 - 0.458333
fliP flagellar biosynthetic protein FliPchromosome CDS3357856 744 - 0.439516
fliQ flagellar biosynthetic protein FliQchromosome CDS3357569 270 - 0.440741
fliR flagellar biosynthetic protein FliRchromosome CDS3356767 798 - 0.458647
fliS flagellar protein FliSchromosome CDS3373086 411 - 0.389294
gspD general secretion pathway protein Dchromosome CDS172301 2115 + 0.476123
gspE general secretion pathway protein Echromosome CDS174412 1566 + 0.501916
gspF general secretion pathway protein Fchromosome CDS175981 1224 + 0.506536
gspG general secretion pathway protein Gchromosome CDS177279 435 + 0.436782
gspH general secretion pathway protein Hchromosome CDS177715 573 + 0.472949
gspI general secretion pathway protein Ichromosome CDS178274 369 + 0.474255
motA chemotaxis motA proteinchromosome CDS4466648 735 - 0.390476
motB chemotaxis motB proteinchromosome CDS4465816 828 - 0.362319
mshC MSHA pilin protein MshCchromosome CDS4263135 474 - 0.447257
mshD MSHA pilin protein MshDchromosome CDS4262579 567 - 0.472663
mshE MSHA biogenesis protein MshEchromosome CDS4266832 1761 - 0.488359
mshG MSHA biogenesis protein MshGchromosome CDS4265609 1221 - 0.478296
mshL MSHA biogenesis protein MshLchromosome CDS4270814 1683 - 0.483066
mshO MSHA biogenesis protein MshOchromosome CDS4261731 849 - 0.465253
pilD type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS428993 927 - 0.466019
pilE type IV pilus biogenesis protein PilEchromosome CDS3677770 393 - 0.396947
pilT twitching motility protein PilTchromosome CDS3495991 1038 - 0.463391
pilU twitching motility protein PilUchromosome CDS3494869 1113 - 0.473495
pilZ type IV pilus biogenesis protein pilZchromosome CDS2748445 327 - 0.477064
pomA chemotaxis motA proteinchromosome CDS1604511 768 + 0.432292
pomB sodium-driven polar flagellar protein PomBchromosome CDS1605282 927 + 0.484358