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2024-05-18 21:33:25

Gene list

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COG category: Cell motility
Genomic element: chromosome 1

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA0937 hypothetical flagellar biosynthesis protein FlhFchromosome 1 CDS1036341 1713 + 0.453006
NA PBPRA0028 Hypothetical flagellar proteinchromosome 1 CDS28830 282 - 0.41844
NA PBPRA0040 Hypothetical proteinchromosome 1 CDS39582 1086 + 0.478821
NA PBPRA0041 Hypothetical flagellin type Bchromosome 1 CDS41029 1281 + 0.473068
NA PBPRA0026 Hypothetical proteinchromosome 1 CDS27987 339 + 0.454277
NA PBPRA2654 hypothetical proteinchromosome 1 CDS3072634 4227 - 0.415188
NA PBPRA1455 Hypothetical proteinchromosome 1 CDS1632041 414 + 0.410628
NA PBPRA0447 Putative methyl-accepting chemotaxis proteinchromosome 1 CDS462339 1602 + 0.44382
NA PBPRA0989 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS1091902 1956 + 0.47546
NA PBPRA0045 Hypothetical flagellar hook control length proteinchromosome 1 CDS44839 1275 + 0.498039
NA PBPRA0029 Conserved hypotehtical proteinchromosome 1 CDS29470 762 - 0.467192
NA PBPRA3384 hypothetical Methyl-accepting chemotaxis proteinchromosome 1 CDS3825226 1617 + 0.471861
NA PBPRA0928 Hypothetical polar flagellar hook-length control protein FliKchromosome 1 CDS1026278 1908 + 0.449161
NA PBPRA0018 Hypothetical proteinchromosome 1 CDS18888 891 - 0.42312
NA PBPRA0046 Hypothetical proteinchromosome 1 CDS46134 495 + 0.450505
NA PBPRA2303 hypothetical hemolysin secretion protein HylBchromosome 1 CDS2651947 1647 - 0.397693
NA PBPRA0915 putative flagellar hook-associated protein 2chromosome 1 CDS1011969 1374 + 0.430131
NA PBPRA0774 hypothetical chemotaxis histidine protein kinase, CheAchromosome 1 CDS852553 2241 + 0.492637
NA PBPRA0776 hypothetical proteinchromosome 1 CDS855531 2796 + 0.490343
NA PBPRA0042 Hypothetical proteinchromosome 1 CDS42577 1545 + 0.502913
NA PBPRA0701 conserved hypothetical proteinchromosome 1 CDS776802 657 + 0.401826
NA PBPRA1792 hypothetical proteinchromosome 1 CDS2062581 375 - 0.370667
NA PBPRA1347 hypothetical proteinchromosome 1 CDS1518094 1317 + 0.38041
NA PBPRA1948 Hypothetical proteinchromosome 1 CDS2246469 321 + 0.299065
ALL2459 PBPRA1597 hypothetical proteinchromosome 1 CDS1828517 1197 + 0.411028
BB2576 PBPRA0014 Hypothetical flagellar biosynthetic protein FliRchromosome 1 CDS16740 780 - 0.497436
BPP0729 PBPRA0661 hypothetical proteinchromosome 1 CDS725233 1320 + 0.418939
CHEV-2 PBPRA1910 putative chemotaxis protein CheVchromosome 1 CDS2196902 891 - 0.380471
CV1706 PBPRA0035 Putative FlgG flagellar basal-body rod proteinchromosome 1 CDS34093 786 + 0.46056
CV1708 PBPRA0036 Hypothetical flagellar P-ring proteinchromosome 1 CDS35533 1125 + 0.478222
CV2997 PBPRA0024 Hypothetical flagellar assembly proteinchromosome 1 CDS25868 687 + 0.458515
CV2999 PBPRA0022 Hypothetical FliF Flagellar M-ring transmembrane proteinchromosome 1 CDS23174 1683 + 0.460487
EBIG1843 PBPRA0278 hypothetical fimbrial assembly protein PilPchromosome 1 CDS292158 522 + 0.444444
EBIG853 PBPRA0032 Hypothetical flagellar basal-body rod modification protein FlgDchromosome 1 CDS31138 675 + 0.451852
ETPF PBPRA3479 putative general secretion pathway protein Fchromosome 1 CDS3930921 1233 - 0.446878
FLAG PBPRA0914 hypothetical flagellin FlaGchromosome 1 CDS1011509 435 + 0.429885
FLGI PBPRA0908 Putative flagellar P-ring protein FlgIchromosome 1 CDS1002944 1092 + 0.456044
FLGM OR PBPRA0897 putative negative regulator of flagellin synthesis FlgMchromosome 1 CDS994152 315 - 0.44127
FLIH PBPRA0925 Hypothetical polar flagellar assembly protein, FliHchromosome 1 CDS1023613 801 + 0.456929
GSPE PBPRA3480 putative general secretion pathway protein Echromosome 1 CDS3932153 1485 - 0.452525
GSPG PBPRA3478 putative type II secretory pathway, pseudopilin EpsGchromosome 1 CDS3930464 468 - 0.425214
GSPI PBPRA3476 putative type II secretory pathway, pseudopilin EpsIchromosome 1 CDS3929509 321 - 0.457944
MSHG PBPRA3279 putative MSHA biogenesis protein MshGchromosome 1 CDS3714013 1224 - 0.455882
NE2488 PBPRA0936 polar flagellar assembly protein FlhAchromosome 1 CDS1034110 2097 + 0.43443
PA1077 PBPRA0901 putative polar flagellar FlgBchromosome 1 CDS997400 396 + 0.426768
PA1078 PBPRA0031 Hypothetical FlgC flagellar basal-body rod proteinchromosome 1 CDS30712 417 + 0.470024
PA1080 PBPRA0033 Hypothetical flagellar hook protein FlgEchromosome 1 CDS31866 1419 + 0.469345
PA1464 PBPRA0946 putative purine-binding chemotaxis protein CheWchromosome 1 CDS1046296 495 + 0.412121
PA3805 PBPRA0761 Hypothetical fimbrial biogenesis and twitching motility proteinchromosome 1 CDS841023 729 + 0.363512
PA4556 PBPRA0699 hypothetical fimbrial assembly protein PilEchromosome 1 CDS775743 381 - 0.388451
PA4954 PBPRA0048 Hypothetical MotA flagellar motor transmembrane proteinchromosome 1 CDS47408 849 + 0.409894
PILA PBPRA3200 hypothetical pilin PilAchromosome 1 CDS3636200 408 + 0.401961
PILC PBPRA3202 putative Type IV pilin biogenesis proteinchromosome 1 CDS3638397 1221 + 0.435708
PLU1945 PBPRA0926 putative polar flagellum-specific ATP synthase FliIchromosome 1 CDS1024413 1323 + 0.465608
PP1940 PBPRA1136 putative methyl-accepting chemotaxis proteinchromosome 1 CDS1259891 2136 + 0.423221
PP4344 PBPRA0012 Putative flagellar biosynthesis proteinchromosome 1 CDS13497 2103 - 0.462197
PP4353 PBPRA0934 putative polar flagellar assembly protein FliRchromosome 1 CDS1031894 783 + 0.422733
PP4393 PBPRA0899 putative chemotaxis CheVchromosome 1 CDS995465 927 + 0.398058
PSPTO091 PBPRA0771 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS850601 1179 + 0.47922
PSPTO092 PBPRA3203 putative leader peptidase PilDchromosome 1 CDS3639765 900 + 0.45
PSPTO192 PBPRA0900 putative chemotaxis protein methyltransferase CheRchromosome 1 CDS996431 831 + 0.424789
PSPTO193 PBPRA0905 putative flagellar basal-body rod protein FlgFchromosome 1 CDS1000531 750 + 0.456
PSPTO193 PBPRA0904 putative flagellar hook protein FlgEchromosome 1 CDS999019 1308 + 0.439602
PSPTO193 PBPRA0902 Putative flagellar basal body rod protein FlgCchromosome 1 CDS997799 417 + 0.42446
PSPTO193 PBPRA0903 Putative basal-body rod modification protein FlgDchromosome 1 CDS998233 717 + 0.457462
PSPTO197 PBPRA0932 Putative polar flagellar assembly protein, FliPchromosome 1 CDS1030622 855 + 0.430409
PSPTO197 PBPRA0933 Putative polar flagellar assembly protein, FliQchromosome 1 CDS1031539 270 + 0.385185
PSPTO197 PBPRA0935 putative flagellar biosynthetic protein FlhBchromosome 1 CDS1032676 1131 + 0.42794
PSPTO198 PBPRA0943 protein-glutamate methylesterase, chemotaxis protein CheBchromosome 1 CDS1043187 1185 + 0.466667
PSPTO198 PBPRA0942 Putative chemotaxis protein CheAchromosome 1 CDS1040860 2241 + 0.442213
PSPTO323 PBPRA2077 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS2391024 2004 + 0.402196
PSPTO495 PBPRA0049 Hypothetical chemotaxis LafU proteinchromosome 1 CDS48263 993 + 0.460222
RB12774 PBPRA3280 putative MSHA biogenesis protein MshEchromosome 1 CDS3715244 1713 - 0.469936
RB9269 PBPRA0808 putative sodium-driven polar flagellar protein MotAchromosome 1 CDS895240 762 + 0.406824
RS00747 PBPRA0034 Hypothetical FlgF flagellar basal-body rod proteinchromosome 1 CDS33299 735 + 0.487075
S2024 PBPRA0777 hypothetical chemotaxis protein methyltransferasechromosome 1 CDS858444 912 + 0.462719
SO0132 PBPRA0161 Putative flagellar protein FliLchromosome 1 CDS163921 417 - 0.417266
SO0166 PBPRA3481 putative type II secretory pathway, component EpsDchromosome 1 CDS3933652 2013 - 0.441133
SO1530 PBPRA0809 putative sodium-driven polar flagellar protein MotBchromosome 1 CDS896010 933 + 0.439443
SO2891 PBPRA1745 Hypothetical proteinchromosome 1 CDS2000551 345 + 0.37971
SO3208 PBPRA0941 putative chemotaxis protein CheZchromosome 1 CDS1040134 717 + 0.433752
SO3218 PBPRA0016 Putative flagellar assembly proteinchromosome 1 CDS17795 729 - 0.444444
SO3222 PBPRA0929 hypothetical flagellar protein FliLchromosome 1 CDS1028267 495 + 0.438384
SO3224 PBPRA0927 putative flagellar protein FliJchromosome 1 CDS1025766 441 + 0.39229
SO3225 PBPRA0025 Putative FliI, flagellum-specific ATP synthasechromosome 1 CDS26547 1341 + 0.482476
SO3228 PBPRA0923 Putative polar flagellar M-ring protein FliFchromosome 1 CDS1020800 1743 + 0.443488
SO3229 PBPRA0922 Putative flagellar hook-basal body proteinchromosome 1 CDS1020472 312 + 0.442308
SO3250 PBPRA0030 Hypothetical FlgB putative flagellar basal-body rod proteinchromosome 1 CDS30287 420 + 0.430952
STY1221 PBPRA0037 Hypothetical flagellar proteinchromosome 1 CDS36807 375 + 0.464
STY2169 PBPRA0917 putative polar flagellar protein FlaJchromosome 1 CDS1013744 411 + 0.423358
TADC PBPRA2501 hypothetical Flp pilus assembly protein TadCchromosome 1 CDS2896458 852 + 0.449531
TAPB PBPRA3201 putative type IV pilin assembly protein PilBchromosome 1 CDS3636660 1638 + 0.473138
VC0514 PBPRA1466 putative methyl-accepting chemotaxis proteinchromosome 1 CDS1658529 1869 - 0.455859
VC2005 PBPRA0180 hypothetical proteinchromosome 1 CDS183686 381 + 0.456693
VC2634 PBPRA0275 hypothetical fimbrial assembly protein PilMchromosome 1 CDS289879 1035 + 0.446377
VCA0176 PBPRA3193 putative methyl-accepting chemotaxis proteinchromosome 1 CDS3624832 1917 + 0.435576
VP0137 PBPRA3477 putative general secretion pathway protein Hchromosome 1 CDS3929865 582 - 0.410653
VP0657 PBPRA0700 hypothetical type IV pilinchromosome 1 CDS776216 630 + 0.407937
VP0770 PBPRA0896 putative chaperone FlgNchromosome 1 CDS993677 429 - 0.391608
VP1981 PBPRA2018 hypothetical methyl-accepting chemotaxisproteinchromosome 1 CDS2327447 2094 + 0.475167
VP2098 PBPRA1120 hypothetical phosphorelay proteinchromosome 1 CDS1245000 360 + 0.4
VP2236 PBPRA0013 Hypothetical FlhB flagellar biosynthetic proteinchromosome 1 CDS15616 1128 - 0.454787
VP2238 PBPRA0015 putative flagellar biosynthetic proteinchromosome 1 CDS17523 270 - 0.451852
VP2339 PBPRA1300 Conserved hypothetical proteinchromosome 1 CDS1474129 741 + 0.376518
VP2857 PBPRA0233 Hypothetical periplasmic protein CpxPchromosome 1 CDS239289 483 + 0.449275
VPA0273 PBPRA0038 Hypothetical flagellar hook-associated proteinchromosome 1 CDS37178 1407 + 0.490405
VPA0274 PBPRA0039 Hypothetical FlgL flagellar hook-associated proteinchromosome 1 CDS38612 915 + 0.440437
VPA1449 PBPRA2003 hypothetical Methyl-accepting chemotaxis proteinchromosome 1 CDS2306984 1566 + 0.389527
VPA1449 PBPRA1254 putative methyl-accepting chemotaxis proteinchromosome 1 CDS1419133 1923 - 0.445658
VPA1462 PBPRA1395 putative methyl-accepting chemotaxis proteinchromosome 1 CDS1568708 1629 + 0.411295
VV0957 PBPRA0898 putative FlgAchromosome 1 CDS994628 708 - 0.435028
VV0968 PBPRA0909 Hypothetical FlgJ, Muramidasechromosome 1 CDS1004121 954 + 0.414046
VV0969 PBPRA0910 hypothetical flagellar hook-associated protein FlgMchromosome 1 CDS1005457 1881 + 0.450292
VV0970 PBPRA0911 hypothetical flagellar hook-associated protein FlgLchromosome 1 CDS1007350 1191 + 0.418136
VV0971 PBPRA0912 putative flagellin Achromosome 1 CDS1008775 1149 + 0.468233
VV0974 PBPRA0913 putative flagellinchromosome 1 CDS1010212 1182 + 0.461929
VV11379 PBPRA0277 hypothetical fimbrial assembly protein PilOchromosome 1 CDS291562 600 + 0.41
VV11397 PBPRA3327 conserved hypothetical proteinchromosome 1 CDS3775736 462 + 0.41342
VV12066 PBPRA2404 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS2775863 2004 + 0.423653
VV12158 PBPRA1115 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS1236736 1461 + 0.4141
VV12583 PBPRA1369 Hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS1538794 1941 - 0.391036
VV20401 PBPRA2838 putative methyl-accepting chemotaxis proteinchromosome 1 CDS3285790 1881 + 0.422648
VV20401 PBPRA2839 putative methyl-accepting chemotaxis proteinchromosome 1 CDS3287913 1884 + 0.441083
VV21195 PBPRA2145 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS2468130 1686 + 0.413404
VVA0366 PBPRA3375 putative methyl-accepting chemotaxis proteinchromosome 1 CDS3814916 1884 + 0.457006
VVA0728 PBPRA2193 hypothetical methyl-accepting chemotaxis proteinchromosome 1 CDS2521677 1401 + 0.418986
XAC1888 PBPRA0778 Putative CheB, chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domainchromosome 1 CDS859450 1053 + 0.525166
XAC1946 PBPRA0931 putative polar flagellar switch protein FliNchromosome 1 CDS1029833 390 + 0.451282
XAC1947 PBPRA0930 Putative flagellar motor switch protein FliMchromosome 1 CDS1028769 1047 + 0.430755
XAC1953 PBPRA0924 putative polar flagellar motor switch proteinchromosome 1 CDS1022529 1050 + 0.430476
XAC1981 PBPRA0906 putative polar flagellar FlgGchromosome 1 CDS1001301 789 + 0.43853
XAC2923 PBPRA3141 putative twitching motility protein PilTchromosome 1 CDS3577569 1110 - 0.442342
XAC2924 PBPRA3142 putative twitching motility protein PilTchromosome 1 CDS3578747 1038 - 0.44894
XCC3231 PBPRA0276 hypothetical fimbrial assembly protein PilNchromosome 1 CDS290910 660 + 0.445455
Y3465 PBPRA0021 Hypothetical FliE-like hook basal body proteinchromosome 1 CDS22816 345 + 0.428986
Y3468 PBPRA0017 putative flagellar motor switch proteinchromosome 1 CDS18523 354 - 0.420904
YPO0715 PBPRA0023 hypotetical puative flagellar motor switch proteinchromosome 1 CDS24843 1008 + 0.447421
YPO0729 PBPRA0907 putative flagellar L-ring protein FlgHchromosome 1 CDS1002107 771 + 0.442283
YPO0741 PBPRA0043 Hypothetical LafCchromosome 1 CDS44142 408 + 0.482843