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2024-05-13 21:35:44

Gene list

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COG category: Cell motility
Genomic element: chromosome 1

Number of genes found: 100

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VP0133 general secretion pathway protein D precursorchromosome 1 CDS143656 2028 + 0.461538
VP0134 general secretion pathway protein Echromosome 1 CDS145683 1503 + 0.500333
VP0135 general secretion pathway protein Fchromosome 1 CDS147185 1218 + 0.478654
VP0136 general secretion pathway protein Gchromosome 1 CDS148464 444 + 0.457207
VP0137 general secretion pathway protein Hchromosome 1 CDS148938 597 + 0.448911
VP0138 general secretion pathway protein Ichromosome 1 CDS149581 330 + 0.481818
VP0183 methyl-accepting chemotaxis proteinchromosome 1 CDS195458 1674 + 0.468937
VP0421 methyl-accepting chemotaxis proteinchromosome 1 CDS422575 1329 + 0.478555
VP0656 putative fimbrial assembly protein PilEchromosome 1 CDS687192 432 - 0.43287
VP0657 putative type IV pilinchromosome 1 CDS687685 558 + 0.433692
VP0658 hypothetical proteinchromosome 1 CDS688251 627 + 0.422648
VP0660 putative type IV pilinchromosome 1 CDS690174 411 + 0.425791
VP0689 sodium-driven polar flagellar protein MotAchromosome 1 CDS721356 762 + 0.5
VP0690 sodium-driven polar flagellar protein MotBchromosome 1 CDS722133 948 + 0.485232
VP0770 polar flagellar FlgNchromosome 1 CDS807670 426 - 0.455399
VP0771 polar flagellar FlgMchromosome 1 CDS808122 318 - 0.468553
VP0772 polar flagellar FlgAchromosome 1 CDS808567 747 - 0.460509
VP0773 chemotaxis CheVchromosome 1 CDS809390 927 + 0.443366
VP0774 chemotaxis methyltransferase CheRchromosome 1 CDS810328 828 + 0.451691
VP0775 polar flagellar FlgBchromosome 1 CDS811468 396 + 0.479798
VP0776 polar flagellar FlgCchromosome 1 CDS811869 414 + 0.471014
VP0777 polar flagellar FlgDchromosome 1 CDS812300 708 + 0.480226
VP0778 polar flagellar FlgEchromosome 1 CDS813039 1314 + 0.449772
VP0780 polar flagellar FlgFchromosome 1 CDS814647 750 + 0.481333
VP0781 polar flagellar FlgGchromosome 1 CDS815415 789 + 0.494297
VP0782 flagellar L-ring protein precursor FlgHchromosome 1 CDS816234 780 + 0.492308
VP0783 flagellar P-ring protein precursor FlgIchromosome 1 CDS817058 1092 + 0.509158
VP0784 peptidoglycan hydrolase FlgJchromosome 1 CDS818166 927 + 0.477886
VP0785 polar flagellar hook associated protein type 1 FlgKchromosome 1 CDS819254 1941 + 0.470891
VP0786 hook-associated protein type 3 FlgLchromosome 1 CDS821208 1194 + 0.453099
VP0788 polar flagellin FlaCchromosome 1 CDS822837 1155 + 0.47013
VP0790 polar flagellin FlaDchromosome 1 CDS824663 1137 + 0.474934
VP0791 polar flagellin FlaEchromosome 1 CDS825916 1125 + 0.472
VP0942 putative fimbrial proteinchromosome 1 CDS983732 198 + 0.409091
VP0963 methyl-accepting chemotaxis proteinchromosome 1 CDS1004735 1992 - 0.463855
VP1049 hypothetical proteinchromosome 1 CDS1099986 1116 + 0.455197
VP1050 hypothetical proteinchromosome 1 CDS1101061 378 + 0.452381
VP1088 putative chemotaxis transducerchromosome 1 CDS1144081 1638 + 0.459707
VP1185 putative chemotaxis transducerchromosome 1 CDS1245445 1620 + 0.475309
VP1486 methyl-accepting chemotaxis proteinchromosome 1 CDS1598362 1596 + 0.469925
VP1628 putative methyl-accepting chemotaxis proteinchromosome 1 CDS1726224 1404 + 0.459402
VP1667 putative outer membrane protein PopNchromosome 1 CDS1783656 894 - 0.470917
VP1668 ATP synthase in type III secretion systemchromosome 1 CDS1784736 1323 + 0.538171
VP1671 putative translocation protein in type III secretionchromosome 1 CDS1787842 987 + 0.487335
VP1688 putative type III secretion proteinchromosome 1 CDS1801133 639 - 0.471049
VP1696 putative type III secretion protein YscCchromosome 1 CDS1806256 1899 - 0.50237
VP1752 putative fimbrial biogenesis and twitching motility proteinchromosome 1 CDS1865751 726 + 0.449036
VP1892 methyl-accepting chemotaxis proteinchromosome 1 CDS1976393 1626 + 0.47048
VP1904 methyl-accepting chemotaxis proteinchromosome 1 CDS1987540 1884 - 0.481423
VP1981 putative methyl-accepting chemotaxis proteinchromosome 1 CDS2074996 2097 - 0.482117
VP2037 chemotaxis protein CheVchromosome 1 CDS2137312 954 - 0.448637
VP2126 hypothetical proteinchromosome 1 CDS2233870 1164 - 0.445876
VP2159 putative methyl-accepting chemotaxis transmembrane proteinchromosome 1 CDS2271346 2037 + 0.464899
VP2191 hypothetical proteinchromosome 1 CDS2300481 4143 - 0.480087
VP2225 chemotaxis protein CheWchromosome 1 CDS2337996 495 - 0.448485
VP2228 chemotaxis protein CheBchromosome 1 CDS2340416 1110 - 0.513514
VP2229 chemotaxis protein CheAchromosome 1 CDS2341550 2235 - 0.497539
VP2230 chemotaxis protein CheZchromosome 1 CDS2343794 741 - 0.45749
VP2234 flagellar biosynthesis protein FlhFchromosome 1 CDS2346696 1470 - 0.473469
VP2235 polar flagellar assembly protein FlhAchromosome 1 CDS2348236 2100 - 0.494286
VP2236 polar flagellar assembly protein FlhBchromosome 1 CDS2350565 1131 - 0.493369
VP2237 polar flagellar assembly protein FliRchromosome 1 CDS2351705 783 - 0.481481
VP2238 polar flagellar assembly protein FliQchromosome 1 CDS2352496 270 - 0.451852
VP2239 polar flagellar assembly protein FliPchromosome 1 CDS2352792 870 - 0.483908
VP2240 polar flagellar assembly protein FliOchromosome 1 CDS2353648 414 - 0.466184
VP2241 polar flagellar switch protein FliNchromosome 1 CDS2354063 411 - 0.484185
VP2242 flagellar motor switch protein FliMchromosome 1 CDS2354525 1047 - 0.485196
VP2243 polar flagellar protein FliLchromosome 1 CDS2355579 504 - 0.492063
VP2244 polar flagellar hook-length control protein FliKchromosome 1 CDS2356132 1932 - 0.493271
VP2245 polar flagellar assembly protein FliJchromosome 1 CDS2358238 444 - 0.475225
VP2246 polar flagellum-specific ATP synthase FliIchromosome 1 CDS2358688 1320 - 0.515909
VP2247 polar flagellar assembly protein FliHchromosome 1 CDS2360011 801 - 0.480649
VP2248 polar flagellar motor switch protein FliGchromosome 1 CDS2360882 1056 - 0.491477
VP2249 polar flagellar M-ring protein FliFchromosome 1 CDS2361930 1743 - 0.497992
VP2250 flagellar hook-basal body complex protein FliEchromosome 1 CDS2363687 312 - 0.458333
VP2254 polar flagellar protein FlaJchromosome 1 CDS2368533 411 - 0.467153
VP2256 flagellar hook-associated protein 2 FlaHchromosome 1 CDS2369265 2013 - 0.486836
VP2257 flagellin FlaGchromosome 1 CDS2371298 435 - 0.468966
VP2258 polar flagellin FlaAchromosome 1 CDS2371813 1131 - 0.456233
VP2259 polar flagellin Dchromosome 1 CDS2373231 1137 - 0.476693
VP2261 polar flagellin Fchromosome 1 CDS2374631 1134 - 0.470018
VP2410 putative tight adherence TadC-related transmembrane proteinchromosome 1 CDS2530170 942 - 0.45966
VP2523 type IV pilin PilAchromosome 1 CDS2663235 420 + 0.454762
VP2524 type IV pilin assembly protein PilBchromosome 1 CDS2663664 1686 + 0.446619
VP2525 type IV pilin biogenesis protein PilCchromosome 1 CDS2665373 1224 + 0.446078
VP2526 type IV prepilin-like proteins leader peptide processing enzymechromosome 1 CDS2666661 870 + 0.434483
VP2614 twitching motility protein PilTchromosome 1 CDS2757118 1107 - 0.483288
VP2615 twitching motility protein PilTchromosome 1 CDS2758255 1041 - 0.467819
VP2629 methyl-accepting chemotaxis proteinchromosome 1 CDS2771153 1626 + 0.45695
VP2694 putative type IV prepilin, MshOchromosome 1 CDS2850125 714 - 0.442577
VP2700 MSHA biogenesis protein MshGchromosome 1 CDS2853562 1224 - 0.457516
VP2701 MSHA biogenesis protein MshEchromosome 1 CDS2854794 1725 - 0.492754
VP2730 conserved hypothetical proteinchromosome 1 CDS2895445 462 + 0.465368
VP2747 putative fimbrial assembly protein PilPchromosome 1 CDS2911835 516 - 0.482558
VP2748 putative fimbrial assembly protein PilOchromosome 1 CDS2912340 594 - 0.434343
VP2749 putative fimbrial assembly protein PilNchromosome 1 CDS2912926 579 - 0.440415
VP2750 putative fimbrial assembly protein PilMchromosome 1 CDS2913488 1017 - 0.45821
VP2827 methyl-accepting chemotaxis proteinchromosome 1 CDS2994794 1881 + 0.479001
VP2857 putative periplasmic protein CpxPchromosome 1 CDS3024258 513 - 0.473684
VP2950 putative flagellar protein FliLchromosome 1 CDS3154717 411 + 0.437956