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2024-05-19 15:14:38

Gene list

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COG category: Cell motility
Genomic element: chromosome

Number of genes found: 86

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA IL2021 Type II secretory pathway, pseudopilin PulG-likechromosome CDS2164023 393 - 0.524173
NA IL2209 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2360593 1776 - 0.487613
NA IL0791 Uncharacterized conserved proteinchromosome CDS848825 489 + 0.464213
NA IL1880 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2011364 1692 + 0.478723
NA IL1068 Methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domainchromosome CDS1147657 1632 - 0.485294
NA IL1543 Uncharacterized conserved membrane proteinchromosome CDS1662399 507 - 0.459566
NA IL2183 Secreted protein, containing von Willebrand factor (vWF) type A domainchromosome CDS2332576 1059 - 0.494806
NA IL2330 Hypothetical proteinchromosome CDS2497536 1350 - 0.428889
NA IL1619 hypothetical proteinchromosome CDS1734884 1005 + 0.459701
NA IL0202 Methyl-accepting chemotaxis protein (HAMP, Cache domains)chromosome CDS220762 1893 + 0.486529
NA IL0510 Chemotaxis response regulatorchromosome CDS535523 1023 + 0.518084
NA IL1421 Methyl-accepting chemotaxis proteinchromosome CDS1529845 1992 + 0.433233
NA IL1149 Chemotaxis protein CheVchromosome CDS1228978 936 - 0.441239
NA IL0279 Uncharacterized conserved proteinchromosome CDS294303 318 + 0.5
NA IL1285 Uncharacterized conserved secreted or membrane proteinchromosome CDS1381554 1746 + 0.443872
NA IL2172 Methyl-accepting chemotaxis proteinchromosome CDS2315730 1554 - 0.499357
NA IL2557 Hypothetical proteinchromosome CDS2741556 147 - 0.47619
NA IL0294 Hypothetical proteinchromosome CDS306833 441 + 0.446712
NA IL1776 Methyl-accepting chemotaxis protein (CHASE3,HAMP,MCP domains)chromosome CDS1910678 1839 - 0.457314
NA IL1296 Methyl-accepting chemotaxis proteinchromosome CDS1393875 1641 + 0.452773
NA IL0645 Predicted membrane proteinchromosome CDS702600 900 + 0.385556
NA IL2343 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2513636 1641 + 0.45582
cheA IL1114 Chemotaxis-specific histidine kinasechromosome CDS1194698 2151 - 0.482566
cheB IL1113 Chemotaxis response regulatorchromosome CDS1193522 1161 - 0.507321
cheR IL1148 Methylase of chemotaxis methyl-accepting proteinschromosome CDS1227986 837 - 0.459976
cheW_1 IL1110 Chemotaxis protein CheWchromosome CDS1191347 504 - 0.470238
cheW_2 IL1111 CheW-like domain containing proteinchromosome CDS1191872 858 - 0.455711
cheX IL1932 Chemotaxis protein CheXchromosome CDS2059535 471 + 0.409766
cheZ IL1115 Chemotaxis protein CheZchromosome CDS1196862 750 - 0.466667
fimV IL1018 Probable Tfp pilus assembly protein FimV , contains LysM domainchromosome CDS1087317 2349 - 0.48957
flaG IL1135 FlaGchromosome CDS1214884 411 - 0.459854
flgA IL1150 Flagellar basal body P-ring biosynthesis proteinchromosome CDS1230076 723 + 0.455048
flgB IL1147 Flagellar basal body proteinchromosome CDS1227481 405 - 0.518519
flgC IL1146 Flagellar basal body rod proteinchromosome CDS1227022 453 - 0.492274
flgD IL1145 Flagellar hook capping proteinchromosome CDS1226324 684 - 0.483918
flgE IL1144 Flagellar hook protein FlgEchromosome CDS1224959 1350 - 0.468889
flgF IL1143 Flagella basal body rod proteinchromosome CDS1224096 744 - 0.489247
flgG IL1142 Flagella basal body rod proteinchromosome CDS1223286 789 - 0.461343
flgH IL1141 Flagellar basal body L-ring proteinchromosome CDS1222577 675 - 0.485926
flgI IL1140 Flagellar basal-body P-ring proteinchromosome CDS1221466 1101 - 0.501362
flgJ IL1139 Flagellum-specific muramidasechromosome CDS1220474 978 - 0.519427
flgK IL1138 Flagellar hook-associated proteinchromosome CDS1218368 2016 - 0.464286
flgL IL1137 Flagellinchromosome CDS1217148 1215 - 0.444444
flgM IL1151 Negative regulator of flagellin synthesischromosome CDS1230915 324 + 0.459877
flgN IL1152 Flagellar synthesis protein FlgNchromosome CDS1231238 402 + 0.452736
flhA IL1120 Flagellar biosynthesis protein FlhAchromosome CDS1201040 2154 - 0.488394
flhB IL1187 Flagellar biosynthesis proten FlhBchromosome CDS1276831 1128 - 0.458333
flhF IL1119 Flagellar biosynthetic protein FlhFchromosome CDS1199693 1335 - 0.491386
fliC IL1136 Flagellinchromosome CDS1215509 1416 - 0.472458
fliD IL1134 Flagellar capping proteinchromosome CDS1213480 1392 - 0.443247
fliE IL1201 Flagellar hook-basal body proteinchromosome CDS1289532 333 - 0.468468
fliF IL1200 Flagellar basal body M-ring proteinchromosome CDS1287793 1713 - 0.483946
fliG IL1199 Flagellar motor switch proteinchromosome CDS1286754 1047 - 0.487106
fliH_1 IL1198 type III secretory pathway proteinchromosome CDS1285990 750 - 0.474667
fliI IL1197 type III secretory pathway ATPasechromosome CDS1284637 1350 - 0.514815
fliJ IL1196 Flagellar biosynthesis chaperonechromosome CDS1284190 444 - 0.459459
fliK IL1195 Flagellar hook-length control proteinchromosome CDS1282299 1767 - 0.487832
fliL_1 IL0266 Flagellar basal body-associated proteinchromosome CDS280311 399 + 0.45614
fliL_2 IL1194 Flagellar basal body-associated proteinchromosome CDS1281688 543 - 0.475138
fliM IL1193 Flagellar motor switch proteinchromosome CDS1280607 1071 - 0.463119
fliN IL1192 Flagellar motor switchchromosome CDS1280120 456 - 0.473684
fliO IL1191 Flagellar biosynthesis proteinchromosome CDS1279795 324 - 0.487654
fliP IL1190 Flagellar biosynthesis protein FliPchromosome CDS1279052 747 - 0.471218
fliQ IL1189 Flagellar biosynthesis protein FliQchromosome CDS1278774 270 - 0.455556
fliR IL1188 Flagellar biosynthesis protein FliRchromosome CDS1277989 786 - 0.474555
fliS IL1133 Flagellin-specific chaperone FliSchromosome CDS1213041 423 - 0.446809
motA IL2135 Flagellar motor componentchromosome CDS2273704 768 - 0.471354
motB IL2134 Flagellar motor proteinchromosome CDS2272763 939 - 0.490948
mshE IL0370 Type II secretory pathway, ATPasechromosome CDS385908 1716 + 0.505827
mshG IL0371 Type II secretory pathwaychromosome CDS387623 1239 + 0.48184
mshI_2 IL0364 Type II secretory pathway componentchromosome CDS380682 609 + 0.464696
mshL IL0367 Type II secretory pathwaychromosome CDS382249 1674 + 0.467145
pilF IL2036 Tfp pilus assembly protein PilFchromosome CDS2179469 456 - 0.473684
pilT IL1973 Twitching motility ATPasechromosome CDS2105849 1035 - 0.480193
pppD IL0453 Pilin protein PilAchromosome CDS468767 483 - 0.498965
pulD IL2026 Type II secretory pathway, component PulDchromosome CDS2168106 2127 - 0.476258
pulE IL0452 Type II secretory pathway, ATPase PulEchromosome CDS467454 1314 - 0.513699
pulE IL2025 Type II secretory pathway, ATPase PulE-likechromosome CDS2166629 1485 - 0.501683
pulF IL0451 Type II secretory pathway, PulF-likechromosome CDS466289 1179 - 0.476675
pulF IL2024 Type II secretory pathway, component PulFchromosome CDS2165399 1227 - 0.471068
pulG IL2023 Type II secretory pathway, pseudopilin PulGchromosome CDS2164959 438 - 0.465753
pulH IL2022 Type II secretory pathway, component PulHchromosome CDS2164418 552 - 0.472826
pulO IL0450 Type II pili prepilin peptidase PilD/XcpAchromosome CDS465413 861 - 0.511034
tadC IL0901 Flp pilus assembly protein TadCchromosome CDS956124 714 - 0.414566
tap IL2235 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2389192 2001 + 0.458771
trg IL0610 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS662042 1626 - 0.46556