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# Phage Gifsy-1

>SC0275 putative outer membrane protein, OmpA family
MTDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVEDGPDS
KLRLAEISAAANPLLAAARPLLCALAAMPAKLDAALVEPYRNLLVREMHL
YQTLCDQANLRREHVLAVRYCLCTALDEAANNTTWGRRGVWAGKSLLVTF
HGESEGGIKLFQIIGRLAASFQEHGNVLEVIYHLLGLGFEGRYSVQPDGR
KQLDNIRQQLLTQLSQRRDPVMPALSPDFQGAISGRLRRMRRVPVWLSAG
IALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPPVPVHKLRLKIL
LANEIARGLLTVDEDDQHSRVVFRGGAMFVPGQKTVSDAIRPVINKAARE
IARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAG
RVHIVGKGDTVPVADNGSKAGRAKNRRVEILVVE
>SC0105 hypothetical protein
MKKVFLLAALFAMSNSSFAAMAESCQQYFNDIDALVEQAAETSEQAKQQF
DAMKPQLEASKKQLKTVAASDQDAACKQALASMVQIKQALGLK
>SC2596 putative bacteriophage protein
MNAETIKDFLVSLGFGIDEAGYEKFESVLAGVTANAIKTGLAVEGAALSV
VAFTAKIASGLDNLYWASQRTGATVQGIQSIGYAVSQVGGSVDAARTSLE
SLSRFVRNNPGAEGFLNRLGVQTRDASGNMRDMAAIFTGVGQKLSSMPYY
RANQYAQMLGIDENTLMAMRRGIGQFSAQYSEMTKAIGFNADQAAVSSNR
FMTSLKAFGEMAGMARDKIGSNLAEGMAGSIDNLRKRILENFPKIESTIT
KIVKGILWLGDIVGRVAFRIVEGVGDIIDWWGKLDKETKTLIEVIGGLVV
AMRILNSTFWMSPVGLITGLIVAFGLLWEDYKTWKEGGNSLIDWEKWQPA
IDKAKDAMVWLRDHLLELKDSIGGWKTSLELLATFIAGAWISKVTGAFAR
LAGIPMPPWLKGWMAYAAYLYDDRENIVASAQSSIDYAKQNIGDGMRALG
IDTDFGRNPHTVKGANIQPDILGAEPVQHAQSAKRTSADRNNNPGNIRPV
GGNGFRFFESALQGWEAMKNQLMRYFTGKTTGRALQTIQDIVSTWAPAGD
NNDPKMYAQDVAKWMGVLPNTVLNLANPETMAALMQSMARKEGYSNWNSP
LAYQAAGGSLNQQTVINVHGVNNPQEAANLIADKQGAVNARAVQQLKGPA
>SC0020 bcfA, fimbrial subunit
MKKPVLALMVSAIAFGGMLSTAQADTTTVTGGTVNFVGQVVDAACSVSAD
SVDQTVALGQVRASKLTEAGMVANQKEDFTIKLEDCDTQTSQNAAVIFNG
QQDANQPGSLANTAGAGSATNVALQLYGPDGQALNIGESSSTVTLNDGEN
VIPLSVDYIATGTATAGNVTATATFSMVYS
>SC0021 bcfB, fimbrial chaparone
MLPRRRHLAWFIPDSLSGFFSRLLGGEKGALRASLRVTNRRHQDITQMKK
NVPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSS
ASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPT
DRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHA
PSTLRCRNERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPA
TPGQVSLRTVNDFGATTPARVCPAS
>SC0022 bcfD, fimbrial subunit
MKIPLLFALLAGSVVSQYAHADVCKNVNGVPSSINYDLTTTLTAEQNQVG
KTVQLEKSQEVNVQAVCPAGASTYSQTYRSYVSPYPVVETSGNWKYLKLD
PDYLEGGMRIEDSSAGDIYPPMNNVLMGYDENVKAGQPFYVRDSNLELQL
KIVKPFVGTVNISPKTMFNVYVMTAAGDPLTDVVYSILYSGTVTVPQSCE
INAGQTILVNFGALYSGNFNHAGQKPEGVREKKFSVPVKCSGLDSQVNLT
MRLIATPDSHVPQAIASDNADVGVVVETDEGNALIPNDVQSVAPFITDSA
GRANITLQAYPVSTTGETPAEGAFTALASLRVDFD
>SC0023 bcfE, fimbrial subunit
MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQ
SIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAGAKIWFTGEPDPDN
PALLAITDTGMGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRN
TLSFYIRYKSTRPTVTSGNATAVMYFDMQYE
>SC0024 bcfF, fimbrial subunit
MRNDILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMG
AVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTVSFSGAADSRNTDLLA
LTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYL
ADGGAVTPGDANASATFILAYE
>SC0025 bcfG, fimbrial chaparone
MPPQPSFLPMNKLFLRCAIYWCLLPISWAQAGVVIGGTRFIYHAGAPALS
VPVSNHSEASWLIDTHILPGGRWPGTKNEGNIMPFVVTPPLFMLSARQEN
SMRVVYTGAPLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRP
EGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYVTLFLLRANERAQDNAGV
VAPFATRQTDWCRHTVRCTVRWQSINDYGRVMTEQTVDLTRIH
>SC1928 cheA, sensory histitine protein kinase, transduces signal between chemo-signal receptors and CheB and CheY
MSMDISDFYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSI
KGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE
QLDAYKNSEEPDAASFEYICNALRQLALEAKGETTPAVVETAALSAAIQE
ESVAETESPRDESKLRIVLSRLKANEVDLLEEELGNLATLTDVVKGADSL
SATLDGSVAEDDIVAVLCFVIEADQIAFEKVVAAPVEKAQEKTEVAPVAP
PAVVAPAAKSTAHEHHAGREKPARERESTSIRVAVEKVDQLINLVGELVI
TQSMLAQRSNELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF
SRFPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD
HGIEMPEKRLEAGKNAVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK
AMSQGMAVNENMTDDEVGMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ
EMGGHVEIQSKQGSGTTIRILLPLTLAILDGMSVRVAGEVFILPLNAVME
SLQPREEDLHPLAGGERVLEVRGEYLPLVELWKVFDVDGAKTEATQGIVV
ILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL
IVDVSALQGLNREQRMAITAA
>SC1924 cheB, methyl esterase, response regulator for chemotaxis (cheA sensor)
MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNP
DVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELG
AIDFVTKPQLGIREGMLAYSEMIAEKVRTAARARIAAHKPMAAPATLKAG
PLLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPAVIITQHMPPGFTRSFA
ERLNKLCQISVKEAEDGERVLPGHAYIAPGDKHMELARSGANYQIKIHDG
PPVNRHRPSVDVLFHSVAKHAGRNAVGVILTGMGNDGAAGMLAMYQAGAW
TIAQNEASCVVFGMPREAINMGGVSEVVDLSQVSQQMLAKISAGQAIRI
>SC1926 cheM, methyl accepting chemotaxis protein II, aspartate sensor-receptor
MPDGVAPFGNIHRYASTNGESASSPPAPSPCILRRHRRCDTVIVNIVFRN
NVFPFCKSKVITAGADNVDNSLSGRCLMFNRIRVVTMLMMVLGVFALLQL
VSGGLLFSSLQHNQQGFVISNELRQQQSELTSTWDLMLQTRINLSRSAAR
MMMDASNQQSSAKTDLLQNAKTTLAQAAAHYANFKNMTPLPAMAEASANV
DEKYQRYQAALAELIQFLDNGNMDAYFAQPTQGMQNALGEALGNYARVSE
NLYRQTFDQSAHDYRFAQWQLGGLAVVLVLILMVVWFGIRHALLNPLARV
ITHIREIASGDLTKTLTVSGRNEIGELAGTVEHMQRSLIDTVTQVREGSD
AIYSGTSEIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQ
ASQLAQSASETARHGGKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQT
NILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSV
SRVDTGSVLVESAGETMTDIVNAVTRVTDIMGEIASASDEQSRGIDQVAL
AVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLASRPLAVN
KPEMRLSVDAQSGNTPRPLAAGDDANWETF
>SC1925 cheR, glutamate methyltransferase, response regulator for chemotaxis
MTSSLPSGQTSVLLQMTQRLALSDAHFRRICQLIYQRAGIVLADHKRDMV
YNRLVRRLRALGLDDFGRYLSMLEANQNSAEWQAFINALTTNLTAFFREA
HHFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKV
FASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQ
ELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVP
LLKPDGLLFAGHSENFSNLVREFSLRGQTVYALSKDKA
>SC2314 cheV, putative chemotaxis signal transduction protein
MDNFQKDIDDRANLTLSNRFELLLFRLGTSLHEQKSELFGINVFKLREIV
PMPAFTRPAGMKAPLLGMVNIRDQVIPVIDLPAVAGCKPETGLNILLITE
YARSVQAFAVESVENIMRLDWQQVHTAEKAVNGRYITSIACLDDNKETNN
LALVLDVEQILYDIVPSSHDLRATNLKTNKFYITPGAVAIVAEDSKVARA
MLEKGLNAMGIPHQMHVTGKDAWERIQQLAQEAEAEGKPISEKIALVLTD
LEMPEMDGFTLTRKIKTDERLKKIPVVIHSSLSGSANEDHIRKVKADGYV
AKFEINELSSVIQEMLERAATNSQGPLISRKSA
>SC1927 cheW, purine-binding chemotaxis protein; regulation
MTGMSNVSKLAGEPSGQEFLVFTLGNEEYGIDILKVQEIRGYDQVTRIAN
TPAFIKGVTNLRGVIVPIVDLRVKFCEGDVEYDDNTVVIVLNLGQRVVGI
VVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGERMLILVNIEKL
LNSEEMALLDIAVSHVA
>SC1922 cheZ, chemotactic response; CheY protein phophatase
MLRDSLRELGLDQAIAEAAEAIPDARDRLDYVVQMTAQAAERALNSVEAS
QPHQDAMEKEAKALTQRWDEWFDNPIELADARELVTDTRQFLRDVPGHTS
FTNAQLLDIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQSA
RPKRENESLLNGPQVDTSKAGVVASQDQVDDLLDSLGF
>SC3951 cpxP, periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses
MRKVTAAVMASTLAFSFLSHAAEVVTSDNWHPGDGATQRSAQNHMFDGIS
LTEHQRQQMRDLMQQARHEQPPVNVSEMETMHRLVTAEKFDESAVRAQAE
KMAQEQVARQVEMARVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVAQWQ
KSSSLKLLSSSNSRSQ
>SC1092 csgA, curlin major subunit, coiled surface structures; cryptic
MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDSTLSIYQY
GSANAALALQSDARKSETTITQSGYGNGADVGQGADNSTIELTQNGFRNN
ATIDQWNAKNSDITVGQYGGNNAALVNQTASDSSVMVRQVGFGNNATANQ
Y
>SC0582 fimA, major type 1 subunit fimbrin (pilin)
MSIIIQTEPTGCRNRVCVIQGKSMKHKLMTSTIASLMFVAGAAVAADPTP
VSVSGGTIHFEGKLVNAACAVSTKSADQTVTLGQYRTASFTAIGNTTAQV
PFSIVLNDCDPKVAATAAVAFSGQADNTNPNLLAVSSADNSTTATGVGIE
ILDNTSSPLKPDGATFSAKQALVEGTNTLRFTARYKATAATTPGQANADA
TFIMKYE
>SC0585 fimD, outer membrane usher protein
MKKTTWFAGRFPGYVSPLSSVALSVLVALCPLTSRGESYFNPAFLSADTA
SVADLSRFEKGNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGTGDKSGG
LMPCFTPEWIKRLGVNTAAFPVSDKGVDTTCIHLPEKIPGAEVAFDFASM
RLNISLPQASLLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFL
SLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSEL
VMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKL
TIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVP
YSTVPLLQREGRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAY
GGTQLADRYRAVVVGAGRNLGDWGAVSVDVTHARSQLADDSTHQGQSLRF
LYAKSLNNYGTNFQLLGYRYSTRGFYTLDDVAYRSMEGYDYEYDSDGRRH
KVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQNYWNTADTNT
WYQLGYASGWQGISYSLSWSWNESVGISGADRILAFNMSVPFSVLTGRRY
ARDTLLDRTYATFNANRNRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRS
STNSYSGSASASWQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITF
SQPLGDTNVLIKAPGAKGVRIENQTGVKTDWRGYAVMPYATVYRYNRVAL
DTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIITARLGGRPLP
FGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIAPYA
LAEDSLKQAITIASATCIRPSS
>SC4440 fimF, putative fimbrial chaparone protein
MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGSTDTTID
LGNYSKERIAEKGATTDYVPFTVSLVSCPEAGTGVPTQAMFRFHGATDDS
NPTYFKNADEGSETGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTAD
FTYYAAMANDGSATVTGGDVSTQVTYTVSYQ
>SC0587 fimF, putative fimbrial protein
MIFRRVFIAIGCVLFSPLSQANSSLGEVNIELRGNVVDFTCAVVAGDSNK
SVNLGTWPTKQLHAAGDATQPVAFSLKLEGCPPGSASITFSGTPAPGTAL
LALADTAMAQKLAIEIRDGDQRRLPLEQASKAVDIDNNGNATLKFYANYI
ALADGVQPGLANADATFLINYN
>SC0586 fimH, minor fimbrial subunit
MKIYSALLLAGTALFFTHPALATVCRNSNGTATDIFYDLSDVFTSGNNQP
GQVVTLLEKSGWGGVNATCPAGTTVNYTYRSYVSELPVRSTEGNFKYLKL
NDYLLGAMSITDSVAGVFYPPRNYIRMGVDSNVSQQKPFGVQDSKLVFKL
KVIRPFINMVTIPRQTMFTVYVTTSTGDALSTPVYTISYSGKVEVPQNCE
VNAGQVVEFDFGDIGASLFSQAGAGNRPQGVTPQTKTIAIKCTNVAAQAY
LSMRLEAEKASGQAMVSDNPDLGFVVANSNGTPLTPNNLSSKIPFHLDDN
AAARVGIRAWPISVTGNKPAEGPFTARGYLRVDYD
>SC0583 fimI, fimbrial protein internal segment
MIRKGAALAGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQNLR
VLMGQYRTNAFTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAE
DPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHF
TARYRAISENMTPGRIHSEVWFTLVYP
>SC1120 flgA, flagellar biosynthesis; assembly of basal-body periplasmic P ring
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSS
PNLLPSCEQPAFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAV
AAPIARGGKLMPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQP
VQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMT
SGQIVSGTVDSDGNILINL
>SC1121 flgB, flagellar biosynthesis, cell-proximal portion of basal-body rod
MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELK
KVMVRGREETGGVALTLTSSHHIPAQAVSSPAVDLLYRVPDQPSLDGNTV
DMDRERTQFADNSLKYQMGLTVLGSQLKGMMNVLQGGN
>SC1122 flgC, flagellar biosynthesis, cell-proximal portion of basal-body rod
MALLNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ
VDAAPGQATGGVKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVG
EMVNTMSASRSYQANIEVLNTVKSMMLKTLTLGQ
>SC1123 flgD, flagellar biosynthesis, initiation of hook assembly
MSIAVNMNDPTNTGVKTTTGSGSMTGSNAADLQSSFLTLLVAQLKNQDPT
NPLQNNELTTQLAQISTVSGIEKLNTTLGAISGQIDNSQSLQATTLIGHG
VMVPGTTILAGKGAEEGGVTSTTPFGVELQQPADKVTATITDKDGRVVRT
LEIGELRAGVHTFTWDGKQTDGTTVPNGSYNIAITASNGGTQLVAQPLQF
ALVQGVTKGSNGNLLDLGTYGTTTLDEVRQII
>SC1124 flgE, flagellar biosynthesis, hook protein
MSFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL
GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQF
KLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTT
TASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYF
VKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNENGILESGGTVNITTGT
INGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTV
VGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGS
GNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV
NLR
>SC1125 flgF, flagellar biosynthesis, cell-proximal portion of basal-body rod
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLS
LATRTLVTASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYT
RNGNIQVGPTGQLTIQGHPVIGEGGPITVPEGSEITIAADGTISALNPGD
PPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTTEAQAERGAVLAADPSIR
IMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLLSM
S
>SC1126 flgG, flagellar biosynthesis, cell-distal portion of basal-body rod
MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIR
QPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQ
GFFQVMLPDGTSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSIT
IGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIETQSSGA
PNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTT
DQMLQKLTQL
>SC1127 flgH, flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein
MKVMQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVA
NGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANAS
RDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGT
LTVTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPS
TQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
>SC1128 flgI, putative flagella basal body protein
MYVFKALAGIVLALVATLAHAERIRDLTSVQGVRENSLIGYGLVVGLDGT
GDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASYPPFAR
QGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGVGA
SAGGSSVQVNQLNGGRITNGAIIERELPTQFGAGNTINLQLNDEDFTMAQ
QITDAINRARGYGSATALDARTVQVRVPSGNSSQVRFLADIQNMEVNVTP
QDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQLNVNQPNTPFG
GGQTVVTPQTQIDLRQSGGSLQSVRSSANLNSVVRALNALGATPMDLMSI
LQSMQSAGCLRAKLEII
>SC1129 flgJ, flagellar biosynthesis
MIGDGKLLASAAWDAQSLNELKAKAGQDPAANIRPVARQVEGMFVQMMLK
SMREALPKDGLFSSDQTRLYTSMYDQQIAQQMTAGKGLGLADMMVKQMTG
GQTMPADDAPQVPLKFSLETVNSYQNQALTQLVRKAIPKTPDSSDAPLSG
DSKDFLARLSLPARLASEQSGVPHHLILAQAALESGWGQRQILRENGEPS
YNVFGVKATASWKGPVTEITTTEYENGEAKKVKAKFRVYSSYLEALSDYV
ALLTRNPRYAAVTTAATAEQGAVALQNAGYATDPNYARKLTSMIQQLKAM
SEKVSKTYSANLDNLF
>SC1130 flgK, flagellar biosynthesis, hook-filament junction protein 1
MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGA
GGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLA
DKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQY
LRDQDKQVNIAIGSSVAQINNYAKQIANLNDQISRMTGVGAGASPNDLLD
QRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGSTARQLAAVPSS
ADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQ
LALAFADAFNAQHTKGYDADGNKGKDFFSIGSPVVYSNSNNADKTVSLTA
KVVDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKV
TVGTGAQKNDSFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGD
SDNRNGQALLDLQNSNVVGGNKTFNDAYATLVSDVGNKTSTLKTSSTTQA
NVVKQLYKQQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALL
NIR
>SC1131 flgL, flagellar biosynthesis; hook-filament junction protein
MRISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAV
VLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNG
TLSDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKTEAAPFDQAT
GGYHGGEKSVTQQVDSARTMVIGHTGAQIFNSITSNAVPEPDGSDSEKNL
FVMLDTAIAALKTPVEGNDVEKEKAAAAIDKTNRGLKNSLNNVLTVRAEL
GTQLSELSTLDSLGSDRALGQKLQMSNLVDVDWNSVISSYVMQQAALQAS
YKTFTDMQGMSLFQLNR
>SC1119 flgM, anti-FliA (anti-sigma) factor; also known as RflB protein
MSIDRTSPLKPVSTVQTRETSDTPVQKTRQEKTSAATSASVTLSDAQAKL
MQPGVSDINMERVEALKTAIRNGELKMDTGKIADSLIREAQSYLQSK
>SC1118 flgN, flagellar biosynthesis: belived to be export chaperone for FlgK and FlgL
MTRLSEILDQMTTVLNDLKTVMDAEQQQLSVGQINGSQLQRITEEKSSLL
ATLDYLEQQRRLEQNAQRSANDDIAERWQAITEKTQHLRDLNQHNGWLLE
GQIERNQQALEVLKPHQEPTLYGADGQTSVSHRGGKKISI
>SC1920 flhA, flagellar biosynthesis; possible export of flagellar proteins
MANLVAMLRLPSNLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTF
NIALSIMVLLVAMFTQRTLDFAAFPTILLFTTLLRLALNVASTRIILMEG
HTGAAAAGKVVEAFGHFLVGGNFAIGIVVFIILVIINFMVITKGAGRIAE
VGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDG
ASKFVRGDAIAGILIMVINVVGGLLVGVLQHGMSMGSAAESYTLLTIGDG
LVAQIPALVISTAAGVIVTRVSTDQDVGEQMVGQLFSNPRVMLLAAAVLG
LLGMVPGMPNLVFLLFTAALLGLAWWLRGREEKAPEEPQPVKMPENNSVV
EATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQDMGF
LPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
GEKTVDPAFGLDAIWIESALKEQAQIQGFTVVEASTVVATHLNHLIGQFS
AELFGRQEAQQLLDRVSQEMPKLTEDLVPGVVTLTTLHKVLQNLLAEKVP
IRDMRTILETLAEHAPLQSDPHELTAVVRVALGRAITQQWFPGNEEVQVI
GLDTALERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLV
NHALRPLLSRFLRRSLPQLVVLSNLELSDNRHIRMTATIGGK
>SC1921 flhB, putative part of export apparatus for flagellar proteins
MAEESDDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVCIIWFGG
ESLARQLAGMLSAGLHFDHRMVNDPNLILGQIILLIKAAMMALLPLIAGV
VLVALISPVMLGGLIFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAV
LKSTLVGCVTGFYLWHHWPQMMRLMAESPIVAMGNALDLVGLCALLVVLG
VIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKESEGDPHVKGKIRQMQRA
AAQRRMMEDVPKADVIVTNPTHYSVALQYDENKMSAPKVVAKGAGLIALR
IRELGAEHRVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQL
KRWRLAGGQRPPQPENLPVPEALDFMNEKNTDG
>SC1962 fliC+F2048, Flagellar synthesis: phase 2 flagellin (filament structural protein)
MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAI
ANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSA
NSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA
NDGETIDIDLKQINSQTLGLDTLNVQKKYDVSDTAVAASYSDSKQNIAVP
DKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADTDKNGTYE
VTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAA
GVADAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASL
KVTSYVDATTGTEKTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQ
PELAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTV
NNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLL
R
>SC1964 fliD, flagellar biosynthesis; filament capping protein; enables filament assembly
MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTL
KSALEKFQTANTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKINVT
QLAAAQSLATKTTFATTKEQLGDTSVTSRTIKIEQPGRKEPLEIKLDKGD
TSMEAIRNAINDADSGIAASIVKVKENEFQLVLTANSGTDNTMKITVEGD
TKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQSNTVTDAPQGI
TLTLTKKVTDATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTAVE
PGEEASDKNGALLGDSVVRTIQTGIRAQFANSGSNSAFKTMAEIGITQDG
TSGKLKIDDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLAD
DGIIDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKL
NNTSSYLTQQFTAMNKS
>SC1972 fliE, putative Flagellar hook-basal body protein
MAAIQGIEGVISQLQATAMAASGQETHSQSTVSFAGQLHAALDRISDRQT
AARVQAEKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVAAYQEVM
SMQV
>SC1974 fliF, flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein
MSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVAMVLWAKTPD
YRTLFSNLSDQDGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRL
AQQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPV
KSARVHLAMPKPSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSS
AVAGLPLGNVTLVDQSGHLLTQSNTSGRDLNDAQLKFANDVESRIQRRIE
AILSPIVGNGNVHAQVTAQLDFANKEQTEEHYSPNGDASKATLRSRQLNI
SEQVGAGYPGGVPGALSNQPAPPNEAPIATPPTNQQNAQNTPQTSTSTNS
NSAGPRNTQRNETSNYEVDRTIRHTKMNVGDIERLSVAVVVNYKTLADGK
PLPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDNTGGELPFW
QQQSFIDQLLAAGRWLLVLVVAWILWRKAVRPQLTRRVEEAKAAQEQAQV
RQETEEAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALV
IRQWMSNDHE
>SC1975 fliG, flagellar biosynthesis, component of motor switching and energizing
MSNLSGTDKSVILLMTIGEDRAAEVFKHLSTREVQALSTAMANVRQISNK
QLTDVLSEFEQEAEQFAALNINANEYLRSVLVKALGEERASSLLEDILET
RDTTSGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRSQAADILALFD
ERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAA
EIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRL
LQEVDSESLLIALKGAEPPLREKFLRNMSQRAADILRDDLANRGPVRLSQ
VENEQKAILLIVRRLAETGEMVIGSGEDTYV
>SC1976 fliH, flagellar biosynthesis; possible export of flagellar proteins
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTEDTPEPELTAEQQLEQE
LAQLKIQAHEQGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAP
IHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSAL
IKQIQQLLQQEPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPT
LHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
>SC1977 fliI, flagellum-specific ATP synthase
MTTRLTRWLTALDNFEAKMALLPAVRRYGRLTRATGLVLEATGLQLPLGA
TCIIERQDGPETKEVESEVVGFNGQRLFLMPLEEVEGILPGARVYARNGH
GDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLETGALITPPFNPL
QRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR
ADVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGA
AYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS
VFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGH
IVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQR
NRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERADWEDSLQALD
LIFPTV
>SC1978 fliJ, flagellar fliJ protein
MAQHGALETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYR
SNLNTDMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKS
WREKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFAQRAAMRKPE
>SC1979 fliK, flagellar hook-length control protein
MITLPQLITTDTDMTAGLTSGKTTGSAEDFLALLAGALGADGAQGKDARI
TLADLQAAGGKLSKELLTQHGEPGQAVKLADLLAQKANATDETLTDLTQA
QHLLSTLTPSLKTSALAALSKTAQHDEKTPALSDEDLASLSALFAMLPGQ
PVATPVAGETPAENHIALPSLLRGDMPSAPQEETHTLSFSEHEKGKTEAS
LARASDDRATGPSLTPLVVAAAATSAKVEVDSPSAPVTHGAAMPTLSSAT
AQPLPVASAPELSAPLGSHEWQQTFSQQVMLFTRQGQQSAQLRLHPEELG
QVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGIQLGQSS
ISSESFAGQQQSSSQQQSSRAQHTDAFGAEDDIALAAPASLQAAARGNGA
VDIFA
>SC1980 fliL, flagellar biosynthesis
MDRTRDNQPISSTETGSPYQMTDSAINKKSKRSIWIPLLVLITLAACATA
GYSYWRMQQQPTTNAKAEPAPPPAPVFFALDTFTVNLGDADRVLYIGVTL
RLKDEATRARLNEYLPEVRSRLLLLFSRQNAAELSTEAGKQKLIAAIKET
LAAPLVAGQPKQVVTDVLYTAFILR
>SC1981 fliM, flagellar biosynthesis, component of motor switch and energizing
MGDSILSQAEIDALLNGDSDTKDEPTPGIASDSDIRPYDPNTQRRVVRER
LQALEIINERFARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPT
NLNLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTE
QRVINRMLKLALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVV
NTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSRHEDQNWRDNL
VRQVQHSELELVANFADIPLRLSQILKLKPGDVLPIEKPDRIIAHVDGVP
VLTSQYGTVNGQYALRVEHLINPILNSLNEEQPK
>SC1982 fliN, flagellar biosynthesis, component of motor switch and energizing
MSDMNNPSDENTGALDDLWADALNEQKATTNKSAADAVFQQLGGGDVSGA
MQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL
INGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR
>SC1983 fliO, flagellar biosynthesis
MMKTEATVSQPTAPAGSPLMQVSGALIGIIALILAAAWVIKRMGFAPKGN
SVRGLKVSASASLGPRERVVIVEVENGRLVLGVTASQINLLHTLPPAEND
TEAPVAPPADFQNMMKSLLKRSGRS
>SC1984 fliP, flagellar biosynthesis
MRRLLFLSLAGLWLFSPAAAAQLPGLISQPLAGGGQSWSLSVQTLVFITS
LTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFI
MSPVIDKIYVDAYQPFSEQKISMQEALDKGAQPLRAFMLRQTREADLALF
ARLANSGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVI
ASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS
>SC1985 fliQ, flagellar biosynthesis
MTPESVMMMGTEAMKVALALAAPLLLVALITGLIISILQAATQINEMTLS
FIPKIVAVFIAIIVAGPWMLNLLLDYVRTLFSNLPYIIG
>SC1986 fliR, putative flagellar biosynthetic protein
MIQVTSEQWLYWLHLYFWPLLRVLALISTAPILSERAIPKRVKLGLGIMI
TLVIAPSLPANDTPLFSIAALWLAMQQILIGIALGFTMQFAFAAVRTAGE
FIGLQMGLSFATFVDPGSHLNMPVLARIMDMLAMLLFLTFNGHLWLISLL
VDTFHTLPIGSNPVNSNAFMALARAGGLIFLNGLMLALPVITLLLTLNLA
LGLLNRMAPQLSIFVIGFPLTLTVGIMLMAALMPLIAPFCEHLFSEIFNL
LADIVSEMPINNNP
>SC1965 fliS, flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)
MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARLFLEQGD
VVAKGEALSKAINIIDNGLKAGLDQEKGGEIATNLSELYDYMIRRLLQAN
LRNDAQAIEEVEGLLSNIAEAWKQISPKASFQESR
>SC0142 hofB, putative integral membrane protein involved in biogenesis of fimbriae (type IV pilin), protein transport, DNA uptake
MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQID
IVCWTRQQMENHRHKPDQAPSTNAAKGGETAAQLLNQTLRSAMAKRASDI
HLEPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRL
PQDGQFTVDLAGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMY
GAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRNTPGINLCSVE
DPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAE
IAIKAAQTGHLVLSTLHTNSTSETLIRLQQMGVARWMISSALTLVVAQRL
VRKLCPHCKQRLSDPVVLSPNLWPSALPRWQASGCQHCYHGFYGRTALFE
VLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEE
ILRVLGMPHER
>SC0141 hofC, putative component in type IV pilin biogenesis
MSVKQLWRWQGVNDKGQLEQDVVWVDNRLALIITLQHQRIMPLRIKRIGV
NAALWKEEQSAEIIHQLATLIHAGLTLSEGLELLAKQHPHRQWQALLRTL
AHELEQGVPFSSALVSWPQVFPPLYQTMIRTGELTGKLAECCFELARQQK
AQRQITVSVKKALRYPVIILAMAALVVFAMLHFVLPEFAAIYRSFNTPLP
LLTRGIIAIAQWGSAWGWLILFLTMLVAIAHRRVKQKPSWQAQRQRLLLR
LPVMGRLIRGQKLAQIFTVLALTQSAGIPFLQGLESAIDSLGCPYWSQRL
TQVHQEIAAGNPVWLALKNTQEFSPLCLQLVRTGEASGSLDIMLHNLARH
HSETTLALADNLASLLEPALLIITGLIIGTLVVAMYLPIFHLGDAMSGMG
>SC3376 hopD, leader peptidase HopD
MVRMGWQRAPFLWKASGKPGNTSLSLSHKSIKVSTSLDEDLLMFVALPFL
IFYASFSLLLGIYDARTGLLPDRFTCPLLWGGLLYHQICLPERLPDALWG
AIAGYGGFALIYWGYRLRYQKEGLGYGDVKYLAALGAWHCWETLPLLVFL
AAMLACGGFGVALLVRGKSALINPLPFGPWLAVAGFITGWKVFFPDG
>SC2826 invC, surface presentation of antigens; secretory proteins
MKTPRLLQYLAYPQKITGPIIEAELRDVAIGELCEIRRGWHQKQVVARAQ
VVGLQRERTVLSLIGNAQGLSRDVVLYPTGRALSAWVGYSVLGAVLDPTG
KIVERFTPEVAPISEERVIDVAPPSYASRVGVREPLITGVRAIDGLLTCG
VGQRMGIFASAGCGKTMLMHMLIEQTEADVFVIGLIGERGREVTEFVDML
RASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKRVVLFIDS
MTRYARALRDVALASGERPARRGYPASVFDNLPRLLERPGATSEGSITAF
YTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRV
FGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMR
DSLKAWLCQPVAQYSSFDDTLSGMNAFADQN
>SC2830 invG, invasion protein; outer membrane
MKTHILLARVLACAALVLVTPGYSSEKIPVTGSGFVAKDDSLRTFFDAMA
LQLKEPVIVSKMAARKKITGNFEFHDPNALLEKLSLQLGLIWYFDGQAIY
IYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVS
GPPVYVDMVVNAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQ
KMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANGEKGKAANYAG
GMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVA
KRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGS
RFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVA
LEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEV
GRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYS
SKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWV
RVYLDRSQEVIK
>SC3571 lpfA, long polar fimbria
MEFLMKKVVFALSALAVVSTSAFAAESGDGTIKFTGEIVDAPCVVSTDSQ
NQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGD
TDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLY
YTANYVATKDTVTTGYGNAEVDFNLSYE
>SC3570 lpfB, long polar fimbrial chaperone
MNRSRLISCTALVLALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKS
TTDEFLIQSWIDDANGNKKTPFIITPPLFKLSPTKNNVLRIVNTTNTLPQ
DRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDG
WNKLQFTSAGANQIKVENPSAFNLTFNKFYANGRDIEKTGMVPAKGSLNI
ELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN
>SC3568 lpfE, long polar fimbrial minor protein
MKNLHALMPACLLLTASAMAAPSNIGSAGDIHFTITIKAATCELENDSID
VNMETVVLQRPVKVGKELNQKNFSIGLKDCAYATKASVTMDGSPDPTDPS
LFALDSGGATGVALKIKTSGGEQQYPSSTDSTPVEHTVWFDGTNKLNYIA
SYVPVKPDATVGPANATVNFSVTYE
>SC3079 mac, putative methyl-accepting chemotaxis protein
MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILCQKILMG
LSTIDIIRNAIIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEIG
TTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGD
AGRGFSVISKEVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPV
IDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNIVKVDHVIWKM
EVYKLLLNKDINSKITMHDQCRLGKWYYGFEGQQFSNYYSFRSLEAPHKE
VHTAGHSALNYFAAGDMNAMSQELDRMERSSNEVVNQLEMLAVDLLKETT
L
>SC1652 mcp, putative methyl-accepting chemotaxis protein
MLRNISVRTCIILFMVCTFLLVDTLQIAFLHDLPILITCNIIYLISSLLL
WWYMTCYLVVPINTVKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLS
ENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASMD
EMAASTKNNADNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQ
MTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVAGEVRNLAHRS
AEAAKNIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEIS
TTTREQEKGINQITLALSDLESTTHSNVLMVEALSASSDVLKAQVIELQT
KTDKFRLS
>SC3094 mcp1, putative methyl-accepting chemotaxis protein
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVR
QMTVLSQGNDQYFRFVTRLSRAMDVKIGGGTPDFAPARQSLENMRQKLEE
MKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHAST
VTPALSRAFGASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGI
AILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEALGRNCVGRLVP
LLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEE
TAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSNVVETMNGI
SASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGASKEIEALIGESVRRVAQGAQLVQETGATMDAILLGVTEVTT
IMKQIASASEEQSKGISQVGVAITQMDSVTQQNAALVEQVSAAAAALERQ
TEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASTPAQSTDEWVAF
>SC3162 mcp2, putative methyl-accepting chemotaxis protein
MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYP
TTVKANLLIDNFNDFIIAQQLMLLDEEGRWSQSSQKDLDEISQRITALLD
ELSSNRHDAASQKIITEIREARQQYLESRFRILKDIQSNNRQAAIQEMMT
RTVQVQKVYKDKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISI
AAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTDYKDETGVLLQ
ALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEE
TAASMEQITATVKNTADHTSEATKLSAGAASVVKNNGEMMNQVTQKMRVI
NDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVR
QLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMDV
ILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQ
ALHLKELVNVFRVREEDTQPA
>SC1930 motA, proton conductor component of motor, torque generator
MLILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNN
GKAIKGTMKAIPLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERD
IENPKESEIFASYPRILADAVMLDFIVDYLRLIISGNMNTFEIEALMDEE
IETHESEAEVPANSLAMVGDSLPAFGIVAAVMGVVHALASADRPAAELGA
LIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVKITLLSNLN
GYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVRNPNQQQTTEEA
>SC1929 motB, enables flagellar motor rotation, linking torque machinery to cell wall
MKNQAHPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISI
SSPKELIQIAEYFRTPLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEK
QPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLR
IQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDF
PYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSD
RGPDDAINRRISLLVLNKQAEQAILHENAESQNEPVSVLQQPAAAPPASV
PTSPKAEPR
>SC2801 orgB, putative flagellar biosynthesis/type III secretory pathway protein
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEE
EAKTLRMYAYQEGYEQGMIDALQQVAAYLTDNQTMAWKWMEKIQIYAREL
FSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLME
NWPGTFNLKYHQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQD
CRTISDNAINALIDEWKTKTQAEVIR
>SC2938 ppdA, prepilin peptidase dependent protein A, putative component in type IV pilin biogenesis
MKKQQGYTLIETVVAMSLIIILSATGLYGWQRWQQQQRLWQTACQVRDYL
LQLREDAHWHNRDHILRVVSEGGSWCFVSSVATQTSCTPSSPFVFTPDWR
DVVLADITPSLAFFGLRNTAWAGHIVLKNAAGEWRLVVSSWGRIRLCERN
EAATCQ
>SC0143 ppdD, putative major component of type IV pilin, prelipin peptidase dependent protein
MEKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYR
TAVELCALEHGGTSTCDAGVNGIPSPVITRYVSGMSVEKGVITLTGQESL
SGLSVIMTPAWDNANGITGWTRNCNIQSDSALQQACEDVFRFDAN
>SC0293 safB, putative fimbriae assembly chaparone
MKIVNFAVMAVALFATNSMVSVYAVNQQLNSATKLFSVKLGATRVIYHAG
TAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVIPPLFRLEANQQSQL
RIVRTGGDMPTDRETLQWVCIKAVPPENEPSDTQAKGATLDLNLSINACD
KLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKP
ITGLEYVPPFADKTLNMPGSAHGDIEWRVITDFGGKSHPFHYVLK
>SC0294 safC, putative fimbriae usher
MKLKQPALLLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQP
GTYRVDVMVNGKRIDTRDVVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTE
DYPQLWKAAKTPDECADLTAIPQAKAVLDINNQQLQLSIPQLALRTKFKG
IAPEDLWDDGIPAFLMNYSARTMQTDYKMDMGRRDNSSWVQLQPGINIGA
WRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQGEIFD
SVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTT
VAPGPFALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYL
KYSLLAGRYRSSDSATDKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAS
LGLGVSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNF
SLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENLQPSSRTTLMLSQSW
GRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQNRTLW
RNGAHRKENITSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQQVGVNGE
AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGGYGLLGGDYSYSRAMR
QMGVNIAGGIVIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDF
RGDTTVGNLSVYQENTVSLDPSRLPDDAEVTQTDVRVVPTEGAVVEAKFH
TRIGARALMTLKREDGSAIPFGAQVTVNGQDGSADLVDTDSQVYLTGLAD
KGELTVKWGAQQCRVNYHLPAHKGIAGLYQMSGLCR
>SC2817 sipB, cell invasion protein
MVNDASSISRSGYTQNPRLAEAAFEGVRKNTDFLKAADKAFKDVVATKAG
DLKAGTKSGESAINTVGLKPPTDAAREKLSSEGQLTLLLGKLMTLLGDVS
LSQLESRLAVWQAMIESQKEMGIQVSKEFQTALGEAQEATDLYEASIKKT
DTAKSVYDAATKKLTQAQNKLQSLDPADPGYAQTEAAVEQAGKEATEAKE
ALDKATDATVKAGTDAKAKAEKADNILTKFQGTANAASQNQVSQGEQDNL
SNVARLTMLMAMFIEIVGKNTEESLQNDLALFNALQEGRQAEMEKKSAEF
QEETRKAEETNRIMGCIGKVLGALLTIVSVVAAVFTGGASLALAAVGLAV
MVADEIVKAATGVSFIQQALNPIMEHVLKPLMELIGKAITKALEGLGVDK
KTAEMAGSIVGAIVAAIAMVAVIVVVAVVGKGAAAKLGNALSKMMGETIK
KLVPNVLKQLAQNGSKLFTQGMQRITSGLGNVGSKMGLQTNALSKELVGN
TLNKVALGMEVTNTAAQSAGGVAEGVFIKNASEALADFMLARFAMDQIQQ
WLKQSVEIFGENQKVTAELQKAMSSAVQQNADASRFILRQSRA
>SC2823 spaO, surface presentation of antigens; secretory proteins
MSLRVRQIDRREWLLAQTATECQRHGQEATLEYPTRQGMWVRLSDAEKRW
SAWIQPGDWLEHVSPALAGAAVSAGAEHLVVPWLAATERPFELPVPHLSC
RRLCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKMLRW
PLRFVIGSSDTQCSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGG
IIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYRKNVTLAELEA
MGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESG
NGE
>SC2819 spaS, surface presentation of antigens; secretory proteins
MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNE
FMGIIKIIIADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQ
AGFVLATEALKPNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAI
ICWKKYKVEIFSQLNGNVVDIAVIWRELLLALVLTCLACALIVLLLDAVA
EYFRTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILSEQVKSDIE
NSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ
ENEVRH
>SC1329 spy, periplasmic protein related to spheroblast formation
MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKFGPHHDM
MFKNLNLTDAQKQQIRDIMKAQREQMKRPPLEERRAMHDIIASDTFDKAK
AEAQITKMEAQRKANMLAHMETQNKIYNVLTPEQKKQYNANFEKRLTERP
AQEGKMPAAAE
>SC1415 ssaC, Secretion system apparatus SsaC
MVVNKRLILILLFILNTVKSDELSWKGNDFTLYARQMPLAEVLHLLSENY
DTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLLTWFDGSMLYVYPA
SLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEVSGVP
SCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQSVV
VPGVVSVLREMSKTSVPASSTTNGSPATQALPMFAADPRQNAVIVRDYAA
NMAGYRKLITELDQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKK
IAFNTGLNDGGASGFSTVISDTSNFMVRLNALEKSSQAYVLSQPSVVTLN
NIQAVLDKNITFYTKLQGEKVAKLESITTGSLLRVTPRLLNDNGTQKIML
NLNIQDGQQSDTQSETDPLPEVQNSEIASQATLLAGQSLLLGGFKQGKQI
HSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVNNGISHG
>SC1436 ssaN, Secretion system apparatus SsaN
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKP
GEELAEVVGINGSKALLSPFTSTAGLHCGQQVMALRRRHQVPVGEALLGR
VIDGFGRPLDGRELPEVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVA
TCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFI
DFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLL
ADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSI
TAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATL
SRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE
>SC1439 ssaQ, Secretion system apparatus SsaQ
MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGR
VWIAEQCWQRWCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQ
NEPPTSCSNLPHQLALHIKWTVEEHEFHSIIFTWPTGFLRNIVGELSAER
QQIYPAPPVVVPVYLGWCQLTLIELESIEIGMGVRIHCFGDIRLGFFAIQ
LPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSDGTSSVELEQI
PQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
LIACGNEFMVRITRWYLCKNTA
>SC1419 sseB, Secretion system effector SseB
MSSGNILWGSQNPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILL
MVIQAIANDKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVP
DDVIKYMRDNGILIDGMTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANR
NTDLMSQGQITIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS
>SC0383 stbA, putative fimbriae; major subunit
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKP
VVLLPTVSTKDLSEQGKTAGPITFDIGLSGCTGSQDKTTKISTVFVGNQV
TSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASA
TYTARYYSTGKAEAGTVAATLQYAVSYK
>SC0382 stbB, putative fimbriae; chaparone
MKMDTRHSALYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQL
KNNDAIPYIVQTWFDDGDMNTSPENSSAMPFIATPPVFRIQPKAGQVVRV
IYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYR
PDGLGKPDSLAKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGA
SYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDLGARISESYDV
PHH
>SC0381 stbC, putative fimbriae; usher
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNE
QQTPSGDYLADVYVNGTLVTSSTNIRFNAVKEGQQTEPCLPLSVMKAAQI
KSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYI
SPSEWDSGALALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQV
RHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASINSILSLGDSYTDSSLF
GSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYET
NVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGN
WHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLA
GGVWATGMGAFGLNATWSNARAEHNERQQGWRAELSYSKTFTTGTNLVLA
AYRYSTNGFRDLQDVLGVRREAKTGIDYYSDTLHQRNRLSATVSQPLGRL
GTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDR
FYHGVNEPLDVSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSR
SSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFGGNLQQNTRF
GALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQ
GAIVQNGQGAVVDRFGYAILPSLSPYRVNNVTLDTRKMRSDAELTGGSQQ
IVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMV
GQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKIC
EKE
>SC2166 stcB, putative periplasmic chaperone protein
MLLTNLFNRRRSSPVFYKQGRVNMKILSAVLLSAIILPAHAGIVIYGTRV
IYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVA
RVAAESGQQLKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFT
MQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWITVTDVK
AGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKINVK
>SC2165 stcC, paral putative outer membrane protein
MLRMTPIASLVLLTLFTWQTQAIATETFDTHFMVGGMRDQKITNFHLDEN
KPIPGQYELDIYVNNQWRGKYDIIVADEPGSTCISTELLKNIGVISDGLQ
PQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENW
DRGINAFYTSYYASQYYSDYKNSGSSESTYVRFNSGFNLLGWQAHADTTF
NKTDGSSGEWKSNTLYLERGIAELLGTLRAGDQYTSSEIFDSVRFTGVRL
FRDMQMLPNSKQNFTPLVQGIAQTNALVTIEQNGFVVYQKEVPPGPFSIA
DLQLAGGGADLDVTVREADGSINTWLVPYASVPNMLQPGVSKYDFSAGRS
HIEGADNQADFTQISYQYGLNNLLTLYGGTMLSNHYNAFTLGTGWNTRIG
AISLDATRSHSKQDNGDVFDGQSYQIAYNKYLTQTLTRFGLAAYRYSSQD
YRTFNDHVWANNKNNYRRDKNDVYDIADYYQNDFGRKNTFSANVSQSLPE
GWGAVSLSALWRDYWGRSGTSKDYQISYSNTFQKINYTLSASQTYDEDHN
EDKRFNLFISIPFDWGDGITTPRRHLNVSNSTTFDDDGFTSNNIGLTGTA
GSRDQFNYGVNVSHQRHDSETTAGTNLTWNTPVATLNGSYSQSSNYTQTG
GSISGGVVAWSGGLNLSSRLSDTFAIMQAPGLEGAYVNGQKYRTTNKKGT
VVYDNLTPYRENHLMLDVSQSSSEAELRGNRKVAAPYRGAVVLVNFDTDQ
RKPWFIKAQRPDGSPLIFGYDVVDHHGHNVGIVGQGSQLFIRTNDIPPEV
SVPVDKEQGLSCSITFGKTVDESKVYICR
>SC2969 stdA, putative fimbrial-like protein
MLRLTPGVYYSYESFLNAFINTLRVVFSLCKIILIHPKDILSMRNKIILA
MAAAGMMYGASVFAADTTPTAGPFGSGKILFTGTITNSPCDIAPGDDAIT
VPFGQISYRKLNTANATTDSKPFTIHLQNCAFDPNETTIAGSAGKMSKVT
VSFSGTADTSGKAYVSTGSAQHVGVQLLKGDNTSLITPNTPMPDGDAQQL
QAGNNELNFFARLIALTDAATPGDVNASVTYTLKYL
>SC2968 stdB, putative outer membrane usher protein
MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAP
GNYILDIWLNDQPVREQYPVRVVPVAGLDAAVICVTTDMVAMLGLKDKII
HGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWV
PPSRWSDGVTAGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLR
SDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLGQTYLSSAIFD
SFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTR
VSPGPFELPDLSQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVR
YKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ
SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTG
STLAFVGYRFSDRHFLSMPEYLQRRTTDGGDAWHEKQSYTVTYSQSVPVL
NMSAALSVSRLNYWNAQSNNNYMLSLNKVFSLGDLQGLPASVSFARNQYT
GGGSQNQVYATISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTW
NISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQYRSLGLSWYG
SVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVS
AGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRQIDANQGEQV
LGHIRLADGASPPFGALVVSGKTGRTAGMVGDGGLAYLTGLSGEDRRTLN
VSWDGRVQCRLTLPETVTLSRGPLLLPCR
>SC2967 stdC, putative fimbrial chaparone protein
MKNSRRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDD
KTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQVRITQVRGLTDK
LPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQ
PERKLTAERNAGHLTLRNPTPYYITVAWLGADRSHRLSGFSEGVMVPPLG
SLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS
>SC2890 steB, outer membrane usher protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNI
AQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPE
LVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLP
QAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGN
GTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLG
AKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSN
AKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFD
VNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWS
LYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETL
QGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAG
HEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLG
SIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRN
QLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGS
YRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNDSP
TSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIG
YRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVANDGNAWLA
GVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKILEGQPPTAP
QKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>SC0195 stfA, putative fimbrial subunit
MNTAVKAAVAAALVMGVSSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEH
QTVNLGHIGTGSLMGGKESSKVDFHIGLENCAFTTEKEASTVFSAIGNES
SANPGSVALMRIGGGEMAGSSIVIGNHLGSAIKLGDAYSENLTMNGSVAA
AKQTLNFKAWVKGDSSASTIDTGEFSSTVNFTISYL
>SC0196 stfC, putative fimbrial outer membrane usher
MAHYKKFRLSTLAAVVGIVLAVGPENSYAEAPIQFNTRFLDVKDDASLDL
SRFSRKGYIMPGSYHLQVLVNQSQIAQDNIITYSVDNNDPDNTYPCLSPE
LVSLLGLKPEIADKMIWINAGQCLQPDQLEGMETQTDLSQSTLTVIIPQA
YLEYSDEEWDPPSRWDEGIPGVLFDYNVNSQWRHAEHDDGDEYDISGNGT
VGANLGAWRLRADWQANYRHENDSEDKDNFGSSSEQNWDWNRYYAWRAIP
QLRAQLTLGEGSLESDIFDGFNYVGGSLITDDQMLPPNLRGYAPDISGVA
RTNAKVTVTQRGRVIYESQVPAGPFRIQDINETVSGDLHVKIEEQSGQVQ
EYDVSTASIPFLTRPGQVRYKLAAGRPQDWDHNMEGGFFTSAEASWGIAN
GWSLYGGAIGEQDYQALALGLGRDLALLGAFSVDVTHSRATLPEGSAYGD
GTIQGNSFRASYAKDFDDIDSRLTFAGYRFSEENYMTMDEFIDTHNDDND
RQRTGHDKEMYTLTYSQNFSAINVNAYINYTHRTYWNQPNQDSYNLTLSH
YFDVGEVRGISLSVNGFRNEYDNERDDGVYVSLSIPWGNNRTLSYNGSFS
DDNNSNQVGYYERIDDRNNYQINAGRADNGATLDGYYRHQASYADIDVSA
NYQEGDYTSGGLNIQGGATLTAKGGALHRTSVNGGSRLMVDVGDEANVPI
SGYSTPVYTNAFGKAVIVDVNDYYRNLVKIDITQLPEDAEATLSIAQATL
TEGAIGYRRMEVLSGKKAMASIRLRDGGTPPFGAEVYNSRQQQLGIVGED
GSVYLIGINPGERLQVTWEGKTQCEAALPDPLPGDLFSGLLLPCIGDASS
PEATQPEEKPLLQLHTQRRTSSTQPEALSSRYPTH
>SC2891 stfD, putative periplasmic fimbrial chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKN
GNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAA
ASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVD
KTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIA
PREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRD
AEKKANK
>SC0197 stfD, putative periplasmic fimbrial chaperone
MMPLKRYNLAAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNA
NSKLPYLAQSWVEDEKGVKITSPLIVVPPAQRIEPSAIGQVKIQGMPALA
SLPKDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQ
HPWQYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAP
KSNVTLGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAKSRKS
>SC4439 sthA, putative fimbrial chaparone protein
MKHIKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKAN
LVQSWLSVADPQVTNKQAFIITPPLFRLDAGQKNSIRVIRSGAPLPADRE
SMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQ
LKWQTAGDVITVNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLSS
TAAPHGTVTWRLISDYGMSLEPHSGSF
>SC4438 sthB, putative fimbrial usher protein
MQFSRVEPRSQLALSFLFICCSIKPALAHDHFNPLSLENDEPGVENVDLS
VFEKGGQAEGTYNVDIYINNTSVETKNIAFKNKKSANNKLSLQPCLSVEQ
LKQWGVKTENFPELKNDPNGCTDLSLLAGAVAKFNVIGNRLDLAIPQIAL
IADPREFVPTSEWDEGINAFLLNYSFTGSQDHDIDENRTENSEYANLRPG
INIGAWRFRNYSTWNHDSDGQNSWDSAYTYVSRDIEFLKGQLIAGENNTP
ADVFDSISFKGVQISSDDDMLPDSMKGFAPVIRGVAKSSAQVTVEQNGYT
IYKTNVPAGPFAINDLYPTGGSGDLYVTIKESDGSEQHFIVPYASVPVLQ
RESHLKYDLTVGRTRSSDTHSAQQNFAELTALYGLAGGITAYGGIESTLS
NDIYHAALIGTGLNLGDLGALSLDVTNSWSKIKAGDVVSDTLTGQSWRIR
YSKDIQSTGTNFTVAGYRYSTKDYYALEDVLDTYSDNSHYDHVRNRTDLS
LSQDIIYGSISLTLYNEDYWNDTHTTSLGIGYNNTWHNVSYGINYSYTLN
ADNSQDEDDDTEDSNDQQISINISIPLDAFMPSTYATYNMNSAKDGDTTH
TVGLNGTALAQKNLSWSVQEGYSSQEKATSGNVSATYNGTYADINGGYSY
DNHMRRLNYGVQGGVLLHRNGLTLSQPMDDTIILVKAPGAAGVPVNNETG
VDTDFRGYAVVPYASPYHRNEVSLDTTGIRKNIELIDTSKTLVPTRGAVV
RAEYKTNIGYKALMVLTRINNLPVPFGATVSSLTKPDNHSSFVGDAGQAW
LTGLEKQGRLLVKWGPTAADRCQVSYRIPSSPSASGVEILHEQCQ
>SC4437 sthD, putative fimbrial subunit
MNMNRFAALAALLTFTGLALWSPSISAAYNTADAVDINVTGLIYADPCTV
TVPDTLSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGVP
YPDPHYASAIYANSAANPAQDLGLQLFNLDGKSLVNLANNVTYTVDINSN
THEANLPVAARMYTPYGKVTAGDFTSVVTITIAWQ
>SC4436 sthE, putative major fimbrial subunit
MRRLYLALILLFAYSSHGYASCKRSGNEGAITITPPSQLVVDSHAYTAGE
VLWQSGWVSTSEVTMDGCSRDYKVGFLYEPGSAQSNTSATINANDGNNTP
VFSTGISGVGVAIKTQTNAGPYDNVMPIDNTYHNGDGNKTHHAMAPAYNV
ELVALGGPITSGTATFQSPLARVSFRDSATEDSGGDILTHLYLGNTQLIM
KAMGCRVETPAITVDLGSVNLGSFANSQTAGTGEQDILLTCEQGTAISAS
LSAQPASGNNPDNSVIQLSNASAPTSATGVGVQLGIQAPDAGFFTDSLPI
NQKIDLFTHTITTNADGSQTVNGGTMNMSTTLKISARYYKTAATVTAGQA
NATATLNLTYN
>SC0177 stiA, putative fimbrial subunit
MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVE
VTLQEEFASLFTAAGQTAGDTDFTIELENCDANIYSSVQARFEGTLDGTD
ATILKNEDDAENIGVQILDKTSTPMTFNDLQAWSAAVALPTAEGVTELSM
PFTARYITTAVPVKSGTVDATATFYLQYN
>SC0176 stiB, putative fimbrial chaparone
MNSLAKAGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNNDNV
PYLIQSWAQSISETGASGDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLPE
DRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVA
DRLTWSRQGRTLTVKNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYTL
PAAASGPIAWSIINDFGGTGPEHKQTP
>SC0175 stiC, putativie fimbrial usher
MRKRQHRVFYLSRCAVCIALGSTFTRVAWARDYFNPAFIENHGQANRTSV
DLSTFDNDKSQLPGTYYVTININKTEIGTRNVDFQLATLSDGQQALQGCL
RLQELKDNGVKTDLFPTLESEKGCVDLNVILGASQRFDFQRQALSVSIPQ
LYIANNARGYVPPEKWQEGITALMLNYSFSGYKEYGSSEDSDDAESKYLA
LQPGFNLGPWRFRNYSNWSSNNGESGSWNSVYNYLQRDIIALKSQFTAGD
SNTPSDVFDSVPFRGLQLTSDDQMQPNSQRGYAPTRGIARSNAQVIVRQN
GYIAYQTAVSPGEFEINDMFPTGSNGDYDVTVKEADGSEQHFIVPYSSLP
ILQRTGRAKYSVTVGKYRDYNNHTLDDFGQATLLYGLPWGITLYGGSQIA
GDKYQSVAFGVGQNMQMLGAISLDSIWSHAKFDDGRKEIGQSWRVRYSKG
VVSTGTTFSLAGYRYASENYNSLSEVISPDDDFYDNYGKRHNRFEASVNQ
QISNTLGSLTLSWVKEDYWHSAQQMESLSASYNNSWGPVSYTLSYSYNKN
TYQYRSDNDDDDNDDDRYNQNDRLFTLSLHVPFTVFDSRLYASYMLNTRK
HDATVNSTTLSGTALRDRNLNWSLQQSHSTQDGDSGGVNASYKGTYANLN
AGYNQSPDSQQVSYGISGGILAHENGITLSQPITGAAILIKAPGASGVSV
ENQTGVATDFRGYTVIPNVTPYYRYDISLDSSTFADNVDIPLNNQTVYPT
RNAVVRAAYDTHKGYRVLLTLTRSNGEPVPFGATASVDGQDANLASIVGD
KGQVFLSGLPEEGLLLVNWGSASCRADYRLDISKNMNGIVMANAVCQ
>SC3506 tcp, methyl-accepting transmembrane citrate/phenol chemoreceptor
MKNIKVITGVIATLGIFSALLLVTGILFYSAVSSDRLNFQNASALSYQQQ
ELGGSFQTLIETRVTINRVAIRMLKNQRDPASLDAMNTLLTNAGASLNEA
EKHFNNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKADNYAAY
GNLDAQKAQDDMEQVYDKWLSQNAQLIKLASDQNQSSFTQMQWTLGIILL
IVLIVLAFIWLGLQRVLLRPLQRIMAHIQTIADGDLTHEIEAEGRSEMGQ
LAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISAGSSDLSSRTEQQASA
LEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVDNVVSTM
NDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTR
VTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAAL
EDQANELRQAVAAFRIQKQPRREASPTPLSKGLTPQPAAEQANWESF
>SC1621 trg, methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
MGNTFSMQASHKLGFLHHIRLVPLFSSILGGILLLFALSAGLAGYFLLQA
DRDQRDVTDEIQVRMGLSNSANHLRTARINMIHAGAASRIAEMDEMKANI
AAAETRIKQSQDGFNAYMSRAVKTPADDALDNELNARYTAYINGLQPMLK
FAKNGMFEAIINHENEQAKQLDAAYNHVLLKAIELRTERARLLSEQAYQR
TRLGMMFMIGAFTLALVLTLMTFMVLRRTVIQPLQQSASRIERIAAGDLT
MADEPTGRSEIGRLSHHLQQMQHALQQTVGAVRQGAEEIYRGTSEITAGN
TDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGKAS
RGGQMVSGVVQTMGNISTSSKKISEITAVINSIAFQTNILALNAAVEAAR
AGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIGASVSLIEQGSEEVIAA
GSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRVTQQNA
SLVEEASAAAASLEEQAARLTQAVDAFHLQDTGATMRSSFL
>SC4385 tsr, methyl-accepting chemotaxis protein I, serine sensor receptor
MLKRIKIVTSLLLVLALFGLLQLASGGLFFNSLKNDKENFTVLQTIRQQQ
SALNATWVELLQTRNTLNRAGIRWMMDQSNIGSGATVAELMQGATNTLKL
TEKNWEQYEALPRDPRQSEAAFLEIKRTYDIYHGALAELIQLLGAGKINE
FFDQPTQSYQDAFEKQYMAYMQQNDRLYDIAVEDNNSSYNQAMWVLVSVL
IAVLVVIIAVWFGIKLSLIAPMNRLIESIRHIASGDLVKRIDVEGSNEMG
QLAENLRHMQSELMRTVGDVRNGANAIYSGASEIAMGNNDLSSRTEQQAA
SLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVDNVVQT
MRDIASSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRNLAQRSAQAAREIKSLIEDSVSRVDVGSTLVESAGETMDEIVNAVT
RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAA
LEEQASRLTQAVAVFRIHQQQQRAREVAAVKTPAAVSSPKAAVADGSDNW
ETF
>SC0308 virG, similar to Shigella VirG protein
MKNFVRTTLLAATLAGVSFGAFATAVPNPPLPAQDPIVQHLKLTNDQITR
IKKLHQQLETDVSQISMKGIKDGALIEVIKSGKWDDAAVKQQLAAFSNIE
QQARYYRVKYYFDLSKVLTPEQRQQVQQDLAQALE
>SC0991 vmtV, Gifsy-2 prophage VmtV
MNFIDKAISMMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQL
NQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAG
TLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQM
VAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPK
SYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIR
LLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIE
PGTILKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWK
PGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEI
ARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVK
PDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFT
AIADITVQA
>SC1226 vmtV, Gifsy-1 prophage VmtV
MGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEM
SADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELF
DTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPS
LAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVAT
ADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
>SC2894 yfcP, fimbrial subunit
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDT
MATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGIEDS
TLPGLLALEPSSEASGFAIGVEMAAQQPVSINATVGTAFVLKEGITTINL
QARLQKYAGEEVMPGEFSGSATVSFEYQ
>SC3039 yggR, putative protein transport
MNMEEIVTLSVKHNVSDLHLCNAWPARWCKQGRMETAPFTAPDVDRLLLD
WLNDAQQYQWRTHGQLDFAVSLSGTRRLRASAFTHQQGTSLALRLLPERC
PDLAEIQTLPIVPALLASENGLILVTGATGCGKSTTLAAMVGYLNQHADK
HILTLEDPIEYRYTSKRCLIQQREIGQHCATFAAGLRAALREDPDVILLG
ELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKEPVR
SQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAH
VIQTGQQQGMMTFAQSAQWRQAQGRL
>SC3845 yifL, putative outer membrane lipoprotein
MKNVFKTLAVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKKVDSQTQSTM
PDKNDRATGDGPSQVNY
>SC3423 yrfC, putative inner membrane protein
MAHSVNLLPWRRQHYVARLRLWCVVWGASLLLIASLATIARLVFWQEGRI
NELLLTAENGHTTALAANIPQLQQRQRQQQARLQRQAQRELTQAWQSILT
DLVNLLPEQAWLTSLNYQQETLELEGLARTFDALLTLETSLRHYVSFPLN
RTGATRQDAQGRWQFHYQLTRSAARERAL