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# Borrelia burgdorferi B31

>gid:13082  BB0040  chemotaxis protein methyltransferase (cheR-1)
MNTNQNKFNLNINITKDELSRLIKIVYNNFGINLSEKKKLLIESRLSSLL
KVKGFKNFTEYINFLEKSTGNIQLIELIDKISTNHTYFFRESKHFDFLNN
KILPKLTEKILNSENSEIRIWSAGCSSGEEPYTIAMMLKEYMEHNRVNFK
VKILATDISISVLNEAREGIYPEDRIINLPKYLKIKYLNQLQDDKFQVKE
ILKKMVYFKKLNLMDEKFPFSKKFDLIFCRNVMIYFDEKTRNNLANKFNS
YLKKDSYLLIGHSETIRGNKNLEYIMPATYKKN
>gid:13096  BB0054  B. burgdorferi predicted coding region BB0054
MKRFVLDLVRFFIFIIFVIVSIFIILLVLIQDEQGDGIGGVFGGGSSSIF
GAKSSSVAVKITGFFIALFFIFVVLLSFLNTRRADDSFLNDIKTENKNSS
TFWDDENSESDANINEIKENNLKEK
>gid:13188  BB0147  flagellar filament 41 kDa core protein (flaB)
MIINHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSG
KINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNG
TYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE
LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSG
EGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSL
AKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATM
TDEVVAATTNSILTQSAMAMIAQANQVPQYVLSLLR
>gid:13190  BB0149  flagellar hook-associated protein 2 (fliD)
MASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQEKSAWQL
INRKISTLNSLAKELTSLNSPFNLMSGNSSNSEVLTLSTRYGSKNETHKL
IVDQIASADVFLSSNFDPKKVTIPEGDYIFLVGKKEINVKSNGNIDLLVK
DINNKGKGFLSAKIVKSDKNGNSRFVLQSLKEGKENKLVIKGEGLSFAKQ
IGILSELKTNFNPNLSDIVVNQSSSNNKLAFENNGLVLNPLSEVSIEIPE
DIEITSRSKIKFEVKYFDTGLEEPDSKIIFNPGGATFKDAKVESEDSVVD
LGSDLKTPLEKKYIQMNMVKICSKEGSLELPLINISNNFEEVEVDVGALS
NLEEINIENKANNKVIVISNVEIFDPKNRDGHLPINAKSFAENAKIKFDG
VDVERDSNVINDLVPNVTLSLKKPSSDMVEAKIEPDYEGIKRVLLDFIGA
YNEVLAEINIVSSNEDQPNNQKSNIVEELTYLSDSQKEEAYKNLGILRSE
FLLKNLKSKLESIIFKPYVTSDPNFSIINQMGVFTNSISSSGGLSRYLRL
DEKKFDESIRNNIDNVRELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGG
VIYNKIKNYDLKIFNQKNKVEDYKKKYEDRERKVEGELNTLDFTVKRMKD
QENTLKAFDFNQRNK
>gid:13222  BB0181  flagellar hook-associated protein (flgK)
MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPL
YAPQLNRAKKQGQLGQGIVVQSIDRVKDELLNTRIIEESHRLGYWTSQDK
FISILEDVYNEPEDQSIRKRLNDFWESWHDLANQPQGLAERKIILERGKS
FCEGIRNRFHSLERIYIMANDEIKITTDEANNYIRNIANLNKQISKSQAM
KDNPNDLMDARDLMVEKLGNIISVSIENKQDPNEFLIHAEGRHLVQGSIA
NEFKLEATNGPTRTRWNILWANNDKAYLKTGKLGSLLNIRDEEIKNEINE
LNNIAANIIEIVNEIHEAGRGMDKKNGRSFFSQELKLTDDRGRYDTNGNG
QFDSVHIFKINSTNEIFPEEKLGFYGTLKFEATNSNEIVEIPYNAPDTVQ
DVINRINNSNAQVTARINSEGKLEIKAVKEQEDENITFKIKHIEDSGSFL
TKYTGILNASGPEGAYDYKNIDTTDKLAPKSTYSISPLKNPAAWIKVADI
IDSDPSKIASGIKNPTNEISIGDNQAALRISSFGNSQIMIGKNLTLNDYF
ANTASNIAIKGQISEITKESQSQILKDLTDLRMSISGVNKDEELANMIEF
QQAFIAASKFITVSVELIDTVINKMGV
>gid:13223  BB0182  flagellar hook-associated protein 3 (flgL)
MINRVSHPLTYENFKTSSAEQESKITKLLENLYKGGKRIVKLRNDPTGVT
HAIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLQSLTNILTRAKEIAIQG
ASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFK
VTRENKISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIHMSNNYPGNVI
FFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKINES
SAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKL
PPYNLSSSTEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRL
LISVADLGAKENRLDRSYERISKEAADMKEDMIQYTDLDVTKAITNLNMA
SLAYQVSIGISAKIMQTTLLDFIK
>gid:13264  BB0221  flagellar motor switch protein (fliG-1)
MKVMQDPRLSKYKNAKNLSKKTVEEIDTLSLNKNFSDSEIQGSMLRSWIS
LIKGNKNKTPVEPKSNNINELKPGFIRKESKVTKIAKYFLAIGLEKSAKI
MSELDDSDIILITREISKISYIAPEEKEHIIKEFEELLRNQKRYVKVDDN
FAYELLNKTLGKSKAKSIYKKVTGNDIFIPFDYLSQIEHEQLWALIKDEN
IKTLVILYNYLNKDQKKYVFSMLEEEDRRKFVKDLVKPRQLSMETIEAIS
NKLKDRFKMQGNLKTDKLDGSKILVDILSYMDFNEEKNLLNNINMRDLNP
VVDSEIREKIFDINVILRIMDNDLHNILREFTDKEIAIIIKDKADEVRDK
MLSNVSKRRKEIILDEEAFLGKISKKDLKTMTTAFVNYIKNLTLKGDLII
YRKNEEFI
>gid:13313  BB0270  flagellar-associated GTP-binding protein (flhF)
MVQYFTEKGPTYNEVIEIIKKKYGKNARVMTYKTVPHGGILGLFSKDWVE
VSGYVRYDIGNQQINVEDEKRKILQSIKREENSSIEDVLKEVKSLKTELA
HKKENINHPTITKIEDILRENDFSENYIKDINEFIKREFSLSDLDDYERV
REDVVLYIAKTIKCSGSIIDNLKKRVFILVGPTGVGKTTTIAKLAAIYGI
NGESKSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVRAIESFKDLKDEIT
DSKDFDLILVDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTKTS
DVKEIFHQFSPFNYKTVIFTKVDETTCVGNLISLIYEMKKVVSYVTDGQI
VPHNISVAEPLTFIRRINGYRISDDAEFIKKIKSKSYY
>gid:13314  BB0271  flagellar biosynthesis protein (flhA)
MLDARKNSILGYLGLNNKSDLIISVGLIFVVAGFILPLPAVILDVLITVN
LVISLLIILIVLYSKRSLDFSVFPTLLLVMTIFGLVLNISSTRLILTKGI
NFDGQMIRTFGTFVVGSSGIQGLVIGFIIFIIIIAVQFIVITKGATRVAE
VAARFALDALPGKQMAIDSAYSSGNLTEEEATRQKNDLQSEVNFYGAMDG
ASKFVSGNVKVGFLITLINILGGLLVGITLQGLNFNEALNNYVSLTVGDG
LVSQLPSLLISTSTGLIVTRSISKNSFGGEIFDQFTNHLGIYWIVSGFLL
FLAFLPGFPTLILMFLSLSIAFLAYSLSGIRQKEEIDKKMKLEEEQASIY
SDKDVSPVVPLDPLALEIGYNLVPIVDDTKTSELLDRIVKIRREIAFEFG
IVVPKIRIVDNMRLEPNAYSFKLRGVEVGRGEIKLGKFLVINVGIDSGID
GDLVKDPSFGLPSLWVNDDGRETAEKLGYTVVDPPSIIATHMTELIKRHS
YEILTRQDVQNTLDVFKKDYGAIVEEVLKNFSVGEIQRVLQGLLKEQVSI
RNLVTIFETIADFTSITKDIFFLIEKCRQSVGRQITSGYLDLNSELNVIT
LNPSFEQMIIDSRVESNHDLISSIDPNLKTKFIYELFKIVNEVQAEGFYP
VVLSSESSRPIIKVITSREIPDLVVMSVLEVPQNIKVNVLKTVEVEE
>gid:13315  BB0272  flagellar biosynthesis protein (flhB)
MIKDEFLIKSWYIPLDFFSADDEGRTELPTDQKKQKAREEGRVLKSTEIN
TAVSLLLLFALFFFMLSYFALDLIAVFKEQAIKLPEVMRMSVYTMGFAYI
RSIMGYVVLFFFASLAVNFFVNIIQVGFFITFKSLEPRWDKISFNFSRWA
KNSFFSAGAFFNLFKSLLKVVIICLIYYFIIENNIGKISKLSEYTLQSGI
SIVLVIAYKICFFSVMFLAIVGVFDYLFQRSQYIESLKMTKEEVKQERKE
MEGDPLLRSRIKERMRVILSTNLRVAIPQADVVITNPEHFAVAIKWDSET
MLAPKVLAKGQDEIALTIKKIARENNVPLMENKLLARALYANVKVNEEIP
REYWEIVSKILVRVYSITKKFN
>gid:13316  BB0273  flagellar biosynthesis protein (fliR)
MYYWDEILNLNFLVLKSFTILPVLVRIFMFLKFSPFFSTIKIGYFNFFFS
LILSVIVVEKIKIIYPLDNMLSFALILLGEAILGLIQAFFVNIIFNVFHL
VGFFFSNQIGLAYANIFDVFSEEDSMIISQIFAYLFLLLFLSSDFLLRFF
VIGIHDSVLNIRVEHLVNMRNSGFVKLLLMSFGFLFEKALLISFPILSLL
LLFYLVLGILSKSSPQINLLIISFSTSLFLGLLILYIGFPSLAISSKRVI
ELSLDSLASFLKLFSRVLK
>gid:13317  BB0274  flagellar biosynthesis protein (fliQ)
MTAGHILYLIRISIENIIILSAPMLIIALIVGLLISIFQAITSIQDQTLS
FIPKIIVILLVIVIFGPWILNKLMQFTYMIFSQLQNV
>gid:13318  BB0275  flagellar biosynthesis protein (fliP)
MRKCFNFFLFFSVTSLSFAQTKSLQTTNGLNFPFLNFDSIGGSEIAFSLQ
LLILLTIITLSPAFLVLMTSFLRISIVLDFIRRALSLQQSPPTQIVMGLA
LFLTIFTMWPTFNSIYEQAYLPLKESKINFNEFYNKGIAPLRIFMYKQMS
DGRHEEIRLFMSMSNYDRPKNFSEVPTHVLIAAFILHELKVAFKMGILIF
LPFIVLDIIVASVLMAMGMIMLPPVMISLPFKLILFVMVDGWTLITSGLI
KSFM
>gid:13320  BB0277  flagellar motor switch protein (fliN)
MSVDEKSDNGEKPEIKGVKLPDLIDTLPEGVDPSNFGLLMDVSMQLTVEL
GRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKIVAKGEVVVIDENF
GVRITEIIKTKNE
>gid:13321  BB0278  flagellar motor switch protein (fliM)
MANNPGALSQDDIDSLLESINSSESLSLDESLSNVISSPTGKKQKVKVYD
FKRPDKFSKEQVRTVSSFHEAFARYTTTSLSALLRKMVHVHVASVDQLTY
EEFIRSIPNPTTLAIINMDPLKGSAIFEVDPTIAFAIVDRLFGGDGDTIK
DKSRDLTEIEQSVMESVIIRILANMREAWSQVVDLRPRFGHIEVNPQFAQ
IVPPTEMIILVTLEVKIGKVEGLMNFCLPYITIEPIVSKLSTRYWHSLIG
VGTTSENLDALREKLENTAMPLVAEIGEVKLKVREILSLDKGDVLNLESS
LINKDLTLKVGTKEKFKCRMGLMGNKVSVQITEKIGDIKGFDLLKELTEE
VE
>gid:13322  BB0279  flagellar protein (fliL)
MPNKDDDNLDMGDSNVSRKGGLLPDIIIKILQILAIGIFTVAIMIIVSYF
VSKMVVSQSGAPSDFPVFSNEYLGKPPMLIWYESIDEIRGNTLDVPPKTF
VVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNESQIKA
EIKARINSILRNGEIKEIALTQIDIFDM
>gid:13323  BB0280  flagellar motor rotation protein B (motB)
MALRIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDIIFQENVIR
IMSASFTGAGFFKGGKTLDFSKLSYLSNSFMSLPSTVRNKQASQTAKNKS
MIEFIEKIQSKNIVVRQEERGIVISLAADAFFDSASADVKLEENRDSIQK
IASFIGFLSPRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHI
LNYLDQSDVKRIENNFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTDA
SLSFPKEIKQ
>gid:13324  BB0281  flagellar motor rotation protein A (motA)
MNLASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSFSALMAS
SEVVAVKKIPTYLGFFFRRNSYAKVSIIKILVELSEKARKEGLLSLDDEL
EQINDPFFKSGMRLVVDGADPEVIRTMLYLELDQMQERHKVGSDLFKTWA
KLAPAFGMTGTLIGLVALLGNLEDKSALGSSMAVALITTLYGTIMANLMF
TPVQLKLEKIDTEEAAVKTMIIEGVLSIQSGDNPRILEQKLMTFLTPKDR
SQLNSSIGGE
>gid:13325  BB0282  flagellar protein (flbD)
MIFVTKLNGDGYYLNPYHIESIEANPDTTILLMNGKKLIVKEKVEEVVNR
IKLYRKEVASLEKILGEGNGGVEL
>gid:13326  BB0283  flagellar hook protein (flgE)
MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSIS
GASRPTDARGGTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNG
FFILKEGKNLFYTRAGAFDVDSDRHLVNPANGMRIQGWMARDLEGEKVIN
TASDIEDLIIPIGDKEGAKSTKNVTFACNLDKRLPLIQEGANPADIARGT
WVVNKSLYDSFGNVSVLELRVVKDLNTPNLWNATVLINGEQNSNFTLGFD
NEGALASLNGQPGQKGDILQIPITFNVLGANVGEVGEQQTVNLKLGTVGS
YTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDL
GKIALASFMNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLE
MANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLKN
>gid:13327  BB0284  flagellar hook assembly protein (flgD)
MNKINGVENVFNLNISNKVKKKTDFNVDNISNKVNLGKDDFLKLLITQLR
YQDPTNPMKDKEFIAQMAQFSALEQMANMSRSFEKLSSSLEIRKDLDLLG
KVIKFQHGDGEIVEGRVTNIKTGAIPQVMVNGNYYVYKNILSVGLEE
>gid:13328  BB0285  flagellar protein (flbC)
MYMSNLLNLSKAYGNKLNLLNTIKGLNLNVSKMESKGNASSFLNVMSSES
KKLAKAKFMIFDFLNFFKDNGLIAKNLKKSPLNKSFFFKKLENEDFVSDL
KSLIARMNVFLDFEGLNSIKEDLSSNFDFLGKEKFFEKIEKLCLAFNDLS
SFLGFDFLTALIDDYYNQISLNDKKEEKNVINIDVKNFKKNNSDHNDFVF
SKFSLNAIDGQNFVDRYKVKEISNDSLKGFVEEFANYNIKSSKDVGGFDF
VSSLKPEWNLKINKNIVDKAKVVLKSNNTGEIKLVLKPKELGSIRINLNL
DSNNNLLGKIVVDNQNVKMLFDQNMHSLNKMLGESGFNASLNLFLAGENL
NSFTGNFKDDSKDQNFHFGYNKFFKIEEEVEFSYDVDKNVNLIV
>gid:13331  BB0288  flagellum-specific ATP synthase (fliI)
MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLCLIDQR
NGKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELL
GRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLD
GFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELN
EFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDV
ALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNGN
GGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINV
LSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDV
DFAISKYPKIINFISQGINETFDFENLEDEIKEILS
>gid:13332  BB0289  flagellar assembly protein (fliH)
MPKVLYKSSEVDNLVKFEFVEIAKPVFESLEIKEKEGKVYDIESQISNLK
EELQLLRDEKLQLEEELAKRQELAKEEVQIESKRLIEEAKAKANEVLEAA
KQEADLLQKEAIYKKESIETESNAEIERLAREYEEKLKTDLEIAIAKGRE
EGYSKGYESGFEDFDKVMRKLHVIIASLIAERKGILESSSGQIVSLVMQI
AIKVIKRITDSQKDIVLENVNEVLKRVKDKTQITIRVNLDDLDIVRHKKS
DFISRFDIIENLEIIEDPNIGKGGCIIETNFGEIDARISSQLDKIEEKFK
NFSLLS
>gid:13333  BB0290  flagellar motor switch protein (fliG-2)
MEEKKEKEILDVSALTGKQKAAILLVSIGSEISSKVFKYLSQEEIESLTF
EIAKLETITSELKDNVLLEFKELMMAQEFIQKGGIDYARELLEKSLGTQK
AVDIINNLGSALQSRPFEFVRRADPANILNFIQQEHPQTIALILSYLDPQ
KASFILSSLPTEVQTNVARRIALMDRTSPEVVREVERVLEKKLASLSSED
YTSAGGVDNVVEIINMADRKTEKFIIESLEEEDPELAEEIKKKMFVFEDI
VLLDDRSIQRVLREIDGQELAKALKSVDIPVQEKIFKNMSKRAASMLKED
MEFLGPTRRKDVEESQQKIVSLIRKLEEQGEIVISRGGEEDVLV
>gid:13334  BB0291  flagellar basal-body rod protein (fliF)
MSKFFTNFFVSAKGIFKKASTVQKIALGLIIFFVILALVFLIGFSTKSQS
IALFGVEIKDQYLLDRISQRLDRENVKYFLSSDGRIYLDDEKLAKKMRAI
LVREELVPVHMDPWALFDIDRWTITDFERSINLRRSITRAVEQHIVALDD
VDAVSVNLVMPEKALFKESQEPVKASVRITPRPGSDIITNRKKVEGLVKL
IQYAIEGLESDNIAIVDNSGTILNDFSNLDGIDRIDLAEKERKLKLKYEA
MLRGEIDSALSKVLSVDRFMIARVNVKLDTSKETTESKEYAPIELQSQDP
KASYNTRKVSDSTIISSQTQKKEYQGQGYSPWGPPGQEGNTPPEYQDLSD
ITGKYNESQEIKNVALNEKKSTSEKEPARIVGVSLGIFVDGIWNFVYDEK
GDFVIENGMRKREYKPMALEEIKNIEDVLQSSFEYKPERGDSITVRNISF
DRMNEFREIDENYFASERFKYFLFIASIVFSLLILVFTIFFAISRELERR
RRLREEELAKQAHLRRQQALMDGGDDIGVDDVVGGIREGDELQSNAELLA
REKPEDVAKLIRTWLLKNA
>gid:13335  BB0292  flagellar hook-basal body complex protein (fliE)
MVRTDAFFTENNINLVKKNPLHFDVNLFSSKSNAKDNDIKTFKDVLINSI
TDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANMNLSILKAVVERG
VKAYQDIINIR
>gid:13336  BB0293  flagellar basal-body rod protein (flgC)
MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA
PRVNNPYWKGPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSIS
SGDKKGYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAIL
QG
>gid:13337  BB0294  flagellar basal-body rod protein (flgB)
MNDFERSVDFSHRYLDVLSLRQSVISDNIANIDTPNFKRSKISFESELEK
AFLNEDKNDLNLIKSSDKHLSGFKNLKYSDVKPHRVLDHFSTMNNNGNNV
DIDSEVKALVQNQMMYHLMTNVQAHYFKSINIVLK
>gid:13355  BB0312  purine-binding chemotaxis protein (cheW-1)
MFRKESSKDSRSQLQVAGFKIGKESYGVSIEHIREIIKVPSEGVYAIPNV
PEYIIGIYNLRGSIIPLINLNIKFGVPSISVTEEDMLLTGYLIVKIKNKL
LGIFVDRVLKVISFDDSRVQEPPATLQTLDRKYISGVVKLDEADNLESEY
LVLIDIAKIFDKCEFDDIPYKDQYEE
>gid:13458  BB0414  chemotaxis protein methyltransferase (cheR-2)
MLEIEDKLFLKFCDFIYNNSGIRFDEKNKFVLQSRVNDAVRALALENPSQ
LYNLIISEKLKKEYFLDLVTTNLTRFFRNSLHFQTFEKFVIPNLINIKNI
EKKNRIIIWSAGCSTGEEPYSLAFVLKSKLPKEIDFVIIASDLSLKSLMI
AKEGYYSSNKCENIPKEYRHYIYSHSNGYKIKNEIKNHIRFDYHNLNFES
NFSEIDVVFCRNVLIYFDEKSKIKVLKKFYNNMSKNSYLFIGHSESLFGL
NLPFKFLKTPWAIIYEKKDTGCQKEKFKSQNKYKL
>gid:13459  BB0415  protein-glutamate methylesterase (cheB-1)
METKISVLIIEYFAVKRKLISDLINSSPKLQVIATASNSKFATNKLKKHK
PEVILMNLEENNIKDILFLEEKNSLNKTIPIVVTSSNQNLINIAASKGAD
DLILVSKNKKSHEIKKEQIINSLLAYGSISIKNKIACNKDMKTKNYERAN
FILNHKNDISSLNQLEEHAKEKTLNEKEIKKLKLRKFDIIAIGVSAGGPV
ALKSILPEIPESFPPIIIVQHMPKGFTEEFAKNLNNLCKISVKETTNNEI
LKQGYAYISSGGYHTKIKKIDGNYQIKTLDGKHINGHKPSIGVLFQSIAE
IAKDKAIAIIMTGMGNDGSREIGDIKKAGGLTIAQDKESSMVFGMPKIAI
KENNIDYIVPLSHMVKLLKAILINS
>gid:13603  BB0550  flagellar protein (flaJ)
MIAKEKIYKQTQVNTSNPLSILIMLYEKAIQDLKVAKELIKDENWQNAVK
ANEKIFHAQEIITELMSTLNFEQGGNISTNLLSIYLFLNKELENVLLKKE
IHKIDNVIKQLQILSFAWKKLSKKENNITQSNNVTQSKLGINIVG
>gid:13618  BB0565  purine-binding chemotaxis protein (cheW-2)
MSTDSDVQDSLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPNYMA
GIINNRGKIVPIIDIRKQFGMSDRAVDEDDKKRNKGVNISNIIILNLVYE
GDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNDKFI
IILNVENLFDVRELSKFRNTTIYDPEYQQQ
>gid:13620  BB0567  chemotaxis histidine kinase (cheA-1)
MDSSDVIDKFKNSFKEESIENISDIEQALLNLEVSSDQDIVNSIFRNLHT
IKGSSGMFGFNFTASLVHEIETVLDVVKNGKAAFNQAAIDATLMSVDFIR
ELIEGDEVISEIDFDKRKQFLVNEIRKVLDISNDVKGAFQEALENDFSKS
DNSSVLEESVKVNSENKFDDEALQSEFKSYKILFSPAKGILFHGHKPINL
LSKLINLGSGYVRAKVDNIPDLELISPDNVYVDWEIRLDTEESRESIEDI
FTFLDSQSKIDIQELDKCLEANEGDNVESKNFNLLHLDRNSKDLTNSSFE
KSAFVGKSFFNGDKNRSNIQDDTARSKVNIASIKVDSKKLDHLVNLVGEL
VTIQSKLSKEAENRNSNILNSISAEFSLLINELRDYTTGLRTVPIEILFV
KFQRIVKDLSTSLGKSILYHASGGDTVLDKSIIEKLNEPLVHLIRNSIDH
GIESAQERESLGKDPKGIIKLSACQSGDSVIVIIEDDGRGLDKNKILKKA
IERNIISDSVAKTLSEIDVYNLIFEPGFSTASSVTDISGRGVGMDVVKKQ
VESLRGHVVLESEFGKYTRIKLIFPLTLAIIEGWLVRVKDEHFIVPLSNV
ESCLESNKLISQIDGIETKSNVMNYRGSMISYIRLREFFQVSSEKSLSEQ
VVVVNTNSGKMGIVVDEVLGQHQTVIKALGKIYSRVEGVSGATILGDGSL
ALVVDIDAITKLIK
>gid:13621  BB0568  protein-glutamate methylesterase (cheB-2)
MKILVIDIQGLIKQVFVRAFSKDNDVEILNAGFNSLNLINVFLQKFPDLV
IIDENTARSNFGNSLNNVLNNISLPVVFIAQNEMLPNFGCLEQSKEKVKL
IINKLNFKLTVDLFRSKYLALIKLELKNLGKNKLISSFEVKRIQAPDFSS
NSKVELRENNLNDSSIRKSYRVSDVINFAPKNDPDVIIKYQGLINKHKTG
KIIVVGSSTGGTEALRIFLRSFKKDSPPIIIVQHMPGGFTKSFAKNLNNE
FNIDIKEAEDGDILRPGLVIIANGSYHLIVKYSSGNYFVNLLDGPLVSRH
KPSVNVLFRSAAMYAGSNAIGVILTGMGDDGAVCMLEMKKNGAYTIAQDQ
ETSVVFGMPMEAIKIGAVDKILPLSEIADHVLRRS
>gid:13631  BB0578  methyl-accepting chemotaxis protein (mcp-1)
MKKFSFFKKKKKAVDLNLLNVVGNDKKDLSTYEYKAPVKEMLKGFYHTKA
SISTLKVGFESLQRILFSEIEDFDQIFSTFVEMTNNARNQISVIFSDLGK
NNKEKLNQISSVIVGIQGSLETISNFLGATNMISLNAKLEAARAKEYGKG
FSVVADEIKRLSDQAKGVMNMISVKEIEEVSKDLISHNLKDLQIDIDKFF
AEILEQLNYLESIFKRFSRSQEEFSSLIESLESIDANMAYYSRNCDSLIG
SDTFMLSNDEFLKELEFIISDQFSWINNLRLLVEGQRTIFIQTDASKHGF
GLFYKGLSPKNDAIRQLWEEVYIPYLNINKFAAEILIIFRVENRSDSGLR
QAKDFLSQAESLSEEIVRKLEHIKKMVIELDNQGISIFS
>gid:13649  BB0596  methyl-accepting chemotaxis protein (mcp-2)
MKRKKLNSNLFYKFNFIILAYTIIIIATTFLLLDQGYKKIITKELQDFTK
FINQAMIKSFSDESKEIIKALSILTTRYDYRSAILNNKNEEHLVSDKILI
TLPSFIKIIEYTNKDGYIIASSEKKRTSQYISLKELLLGKALTAFQISIL
HNSLAKINNNFYIPIAYKITDSKKSNVGYIILYADISEKIAELKEYLLLL
LENSLLEQNASTENSSKYFNVYIINSSGDAFGGKDEILKNIKHIFGFNPK
TLTEILNTLSQGKANYNTSNSNEIISLARITTSNWYLGIKIDYNNIFSKE
FKNMRLVSLSIIFILVIIFILIMISTIKTLIISKIDKLNVVIPKVKNGDL
TFKIESKGKDSISSTINLFGHFIENLKNVINSLQERVKLLKENGDHLFSE
INKTHNTIKNSNQYIEKTQEEVEKQVEFISNTTNIIESLSKNISSLDNSI
ETQAASVEQSSSAIEEMIGGIQSITEITQKAAKSTEELKRFSDDGRKKQE
EVITQIKEIFKNSTRLQEANSLISSIASQTNLLSMNAAIEASHAGEAGKG
FAIVAEEIKDLAEQVTSQSESVASSINEIMDSITKTVNTSELTNKAFNQI
FDSINLVVQVIEEINHTMQEQSIGSQEILKALNTMREITYEVKIGSNDMF
RGNKEIISTIKLLGEINITVSNSMKGLKEEINTLVEAIERIKVLGTTNSS
HISGISESINQFKTK
>gid:13650  BB0597  methyl-accepting chemotaxis protein (mcp-3)
MTDENLIDVNLKNTKRFLYLVLFGFLFLNFLFIGYAYMNHKNEYLDRFKF
DSKLFLNSVSAVIKAKYSESSRFLEELIRDSYRFGILVNSSKSFLLSSSL
KLGDSLDENSDLFLRSREFNSIDKIFKTIPLAEDSLEGIFYIPIGKNVLI
SNSNFSSLGLKDVRLDPIYSVPVEKNSKYYSRYMQIDGKIYSIISFPVRD
SVSTLGVIGILICFDESLDIIENQLYSSLKFGSKNYNFFMLDRNYMPIFS
NLNNLQAKSFSTAYSENFLSKVIAYAKKDSSSSQYTFNYERDFYSLNFVK
TDDFLTQGLILNVNSIPIMFKSNWVIFVAFLLLSFAIIFYLCNTFVFSLI
NDFNRIVDYQKSKSDPFSLESPLEVKYSSSIISYISSKLDNLSSKSNESF
EKIKFYSEDLNEYLEQIETAISNTESIDSSILVYEQLRDTFSRFEKSIVD
ILKGFESIADPINDHNKYISEISSNFEESVSFFYSIDKNLEIFNKVATIN
STDIENIKSKVFDLNIVFENVNKNFADLLSQTNSLQSVNKLLVSISAQTN
MLAMNAAIEAAKAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVDS
IIAVINSEIDTIYKNFIDIQDNVDNNFSRHEKVDLTLAKHFKEIGEFKER
YLSHDTKIRDAKNMYKEIFNNHYFISGKFNNFSQDLKEFKVSKMNLDAVS
SLQEYSSLVKSSKDKILKTKELIQKINDEIKDILF
>gid:13659  BB0606  conserved hypothetical protein
MLNHFNFKLKRDVTIIVPGEAFVSNKRVISTILGSCVAVVLCDESNNLIG
MNHYVLVKSDLDISPDQRGRYGIYAIPMLINAMLENGASKSNLKAKLFGG
TNFMAKGSVKVGLENSEFAVNTLNKYRIPILAKDFDQSKSRKIFAFPENF
KVIVEYPDGTKVF
>gid:13727  BB0669  chemotaxis histidine kinase (cheA-2)
MEILDLENEELLGVFFEEAQNLVDILEENIMSLEDDPNNSDTIDEIFRAA
HTLKGSSASLDMMELSDFTHIVEDVFDAIRDGKVNINNDLVDLLLSSLDV
IKEMLALRIDGKVYLNDISDLKSKLKQFLVIDDQTFIKRFDGNSIKNNFC
LSESDLEEIREGLGIGQKVLRISVVFNSNSNSEVENSGLKIFNILKNLGS
VLHTIPKYEQIIEDKFLKRVDYYLIYSDIEGVKKSLDSLNLIESYLVDEF
NVKEELKKLADEEIKDVDLDSNFVLNDNFDFTEDEISDLLLEVENQKLFK
VRLDFVKDNPMATISGLQMLQALKSLGKIFKSIPDSSELLADKFFDFVIY
YLISNTSEESIAKKINLPDVVSHFEIKNVNLESLKSVRLKEDDEAPFKEN
KNIKKNSPISVNLIRIDSKKIDYILNLVSEAVISKSSYNQINSEMITLFY
NFNYFYDYQESFQRNFLIDLKIVFKDAGLTLEDEIESHINSLMSFKMEKA
LKDISELRNSFFRLLQNFKMTSGRLSRIITDLHESVLKTRMLPISNIFSR
FTRVVRDLSKKLNKIVNLKMEGEETELDKSVIDDLVDPLMHCVRNSMDHG
LETVEERVKRGKSKAGTIILRAKNEGNVISIEIEDDGIGIDPKVIRRKLI
EKGTIKEDAIYSDFELINLIFAPGFSTAVQVTDLSGRGVGLDVVKKSIEK
LNGTILVESEIGLGTIFKIKLPLTLVIIQGLLVKSGSETYVIPLNNVLET
HRITEHDIKLLENYHEVYNLRDEVISVLRLDKLFNITRDDSLIEKFLIVV
NTSNMKIAIVVDSILGEEDFVVKPIKDKFSSSAGIVGATTLGNGKVVLII
DVFKLFDLQKDTKE
>gid:13728  BB0670  purine-binding chemotaxis protein (cheW-3)
MQIKEIYFGPKILDDKNSNSKLTNFDFKVVSFELGSDHYLVDIMQVKEIR
KSSNFTYVPNAKKYVAGLDNLRGEIIPIIDLRIMFNLEFNKKDIEDIMVL
KNEDLLIGVIVDKINNVFSIDSSLIQDPHPVLSQDSLINYIKGVVDYNEK
LYILLNVFKIFNYGEEEKLLKPGQNFVEKSDFVSDCDNLDILENSKNDFS
NKVSSKNDGNNENSTLNNTAAFNLENIKKNLLKYSFNASLVNDVFLEKVG
VKFNMVDTDYLPCDSFLNEFYSKSSGNLWGADCLEEFKNEIVESRLSFMN
NLNSIFNVLEIGCGSGKETMALANALSEYYVKPFKLTAIDNDLSKVVETS
RLVFSESEIGISEIYSRNSFEQSPGVYKFKSEILSNVLFEYSDALFSDLP
DNLGMVFLKDVLCFLDSKDQILILNIIASKAIKGALLVLGDNEELKNNDV
FIKEKSTKYFNLYRKV
>gid:13729  BB0671  chemotaxis operon protein (cheX)
MRIDYIEPFLDAASSVLRDMLLVENIEMGKPGLKSINQKIKGVSVIVGLA
GSVEGSIIIDMDIETALFVASKLNFEEYDDFDDEETKEMVAATLTEVGNI
IAGNFVTTLHAKGFVFDITPPAFIYGENMKISNKGSEALIVPFSLPDGKI
IEVNIAIRERV
>gid:13738  BB0680  methyl-accepting chemotaxis protein (mcp-4)
MLLKLKYRFVGFLLLFLIFILLLFSTIFNFVLCGYLEDYYKQLTRAQVRR
AAFSLQSFLDTLHVIINGAASNLALETISEFAMSENRGKDFSESELIDLR
KNPKFVIDSVKVSKKYRQYLYNFMANLKNDTLFEEFAFFDFEGRVIVSTR
HENNMDFGHSEANTNYFKKAVEDYRQNQLKFIGWYSNLSEGISAEVAIRS
KQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDIVADSFDRFRFGFYKRG
NFIYVDPNNIAVNPFEEYNETSRVSSKFLNVLKDVFSKPPFPSNIASEVS
VYTIDRILLSEMGEDCYYAMLPISSKLGEKSGVLIARLPYKDIYGVISSL
RFQYILYSVLGIIALSIVLSIRIDRIISFRLNAIRVLVQDMVKGNLDKDY
ALDDDENTLDELGMLSLQVVKMKKAISVAISSVLRNISYVNKASLEVASS
SQNLSSSALQQASALEEMSANVEQIASGVNMSANNSYETEQIALKTNENS
QIGGRAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGK
GFAVVASEIRKLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEE
TANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSSEQLSSMSDKM
LEKSKELRKSVLFFKIKDSKIENPENDDYDFRLIDCPENSFKDENQNLKS
NGISTSNASGHNNYSLDIESESSVRTINKRVDPKKAIDIADKDLNFDDDF
SEF
>gid:13739  BB0681  methyl-accepting chemotaxis protein (mcp-5)
MVSMKLKARMLLLVLILIAFFISILFFAFGMLINSKLVDQQFNLMINLIE
SIKSSFNLYISSMEEKVRVSSMYFNSAEKFNEASKIKSKRLSFISDQSEI
LIQTGSNMMVTDKEGKIVFTTAVKDNSDFGKSIGDREYFTKLKESNSIVY
NSFVMLADPGSIEESLLKDISKIKNKKGQIPYILIGMPLRDFETDNIFGY
FMFLYSMDYIYRSFRGINFGILSSGRALAYDTTGRLLVHHVVLPGDILTD
ISASYSNIIKKTSEDLLQKNKEISTVYYYDPKSNKKYVGISQKVLLNLSN
NKFILLMRTSEDDFYYMSRATTIILAISFVFTLLMLAIATLYLVKKLSSS
LNKILEYSERLASGNFTADINFGKWDTVELYSLYEGLEQLRTNFSSVAKG
VIENLDYLYENAIQIANASQNLSSGAVEQASTLEQMTANIEQISQGVSEN
TENAATTEKIAVNTNERTKEGHKSVVKAIEAMTVITEKIGIIDEITRQTN
LLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESAREIIDIANRSLT
VASRAGENFEQIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQL
VQTTASSSEELSAMSEKMLESVKDLKESVDYFKIEK
>gid:13814  BB0752  B. burgdorferi predicted coding region BB0752
MKNKENEVLNLTLNLTIIFLIFCNISIXIFKIDFTKHKAFTISKVTKNLF
SSANETIYITYYNSGSLENYFAFPNQIKNFLISFSDASKCKVIYKEIDAD
KISTPLEHIGIPSQQIDLRDINQLSILKIYSGIEIIYEGKREVIPVVTEI
SNLEYDLANGLDKLINNTKKVLGLAFGDSTLKEAHKNFSEIMKKAFGIEI
KEIDLKTEKLEDIRKDINGLFIIGAKEIDEEIAKKIDDFIVNDGKIFVAT
STIDYNPQNPYGITPIKSSLFDLFESYGIKYNDNIILDKRAPTIFLGGNF
QTYYPWILIDKSNIVKKDMPLLKNFYTATIPWSSSLELIKKDETEVKFLP
LFASSKQSWQVKEPNLSNISLNAFEVPNKFEENKTKILGYAIEGKIKSPY
KDQYSKNSKIILTGSSMIFSDYMYNGSPSNFELSGRISDYLMQKEEFFNI
KSREVRAKLKFASSSNEMVNAKFSLIIVNLIILPTIILIFGLVRFTRKRK
AN
>gid:13835  BB0772  flagellar P-ring protein (flgI)
MNKLMLMLITFATSLLAQTNKASTGLKTDQSFNNSLSESVKLKEIADIYP
TNTNFLTGIGIVAGLAGKGDSIKQKDLIIKILEENNIINEIGSNNIESKN
IALVNVSLQVKGNTIKGSKHKACVASILDSKDLTNGILLKTNLKNKEGEI
IAIASGITQPNNKLKGSGYTIDSVIINENQNINHSYNIILKKGNYTLINR
IHKILTSKKINNKIKSDSTIEIEAKNISLLEEIENIKIETNPKILIDKKN
GIILASENAKIGTFTFSIEKDNQNIFLSKNNKTTIQVNSMKLNEFILKNS
NNLSNKELIQIIQAAQKINKLNGELILEEIDGNQN
>gid:13837  BB0774  flagellar basal-body rod protein (flgG)
MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHN
RAGTPATENTLRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGD
GFYKILLPDGTYAYTRDGSFKIDSNRELVTSQGYKVLPNILFPEEYIQNS
ITISEEGIVSVKIDTSNEPIELGQIEISRFINPAGLSAIGSNLFKETAGS
GQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQ
TSDNMLGIANNLKRQ
>gid:13838  BB0775  flagellar hook-basal body complex protein (flhO)
MGQLMLILIKLIVFKDLTVVRGIYTAASGMMAERRKLDTVSNNLANIDLI
GYKKDLSIQKAFPEMLIRRLNDDGLYKFPKGHLETAPVVGKIGTGVEENE
IYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYTRNGSFTIGKEGI
LVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEYEN
SWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKI
ETETLEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGKY
>gid:860310  BBA24  decorin binding protein A (dbpA)
MIKCNNKTFNNLLKLTILVNLLISCGLTGATKIRLERSAKDITDEIDAIK
KDAALKGVNFDAFKDKKTGSGVSENPFILEAKVRATTVAEKFVIAIEEEA
TKLKETGSSGEFSAMYDLMFEVSKPLQKLGIQEMTKTVSDAAEENPPTTA
QGVLEIAKKMREKLQRVHTKNYCTLKKKENSTFTDEKCKNN
>gid:860360  BBA74  outer membrane porin (oms28)
MTKIFSNLIINGLLFGFVSLNVFADSNNANILKPQSNVLEHSDQKDNKKL
DQKDQVNQALDTINKVTEDVSSKLEGVRESSLELVESNDAGVVKKFVGSM
SLMSDVAKGTVVASQEATIVAKCSGMVAEGANKVVEMSKKAVQETQKAVS
VAGEATFLIEKQIMLNKSPNNKELELTKEEFAKVEQVKETLMASERALDE
TVQEAQKVLNMVNGLNPSNKDQVLAKKDVAKAISNVVKVAQGARDLTKVM
AISLYMR
>gid:860199  BBK07  B. burgdorferi predicted coding region BBK07
MSKLILAISILLIISCKWHVDNPIDEATAESKSALTSVDQVLDEISEATG
LSSEKITKLTPEELENLAKEAQDDSEKSKKEIEDQKNTKESKNIEVKDTP
RLIKLIKNSSEKIDSVFQTLINIGYNATYAAKSNLKNGLKMVKLLDELLK
ISVSSNGDKSTQKYNELKTVVNRFNAENSAIKVPLENGSKIEAKKCIKTL
MTNVETYFKGVSTELKDKKDDKYTKILAALSEAANKIENAAMAIHLCFNN
>gid:860204  BBK12  B. burgdorferi predicted coding region BBK12
MSKLILAISILLIISCKWYVDNTIDEATVESKSALTSIDQVLDEISEATG
LSSEKITKLTPEELENLAKEAQDDSEKSKKEIEDQKNTKESKNIEVKDTP
RLIKLIKNSSEKIDSVFQTLINIGYNATYAAKSNLKNGLKMVKLLDELLK
ISVSSNGDKSTQKYNELKTVVNKFNAENSVSVSFKEHSNSKIETKKCIQT
LMKNVETYFEGVCSELKNKNDGEYEKTLTTLS
>gid:860236  BBK47  B. burgdorferi predicted coding region BBK47
MRLCLIKIFIIPNLVFSSLFLFESCSGFLSKKSIEQFALALKDHQENKNT
TNTSVDKNSKEIESPKDVTSSNKKTYDPILQVGSNQHMSDDPGANNKESL
PNSSPAIIQNDSHAQNNVKMEENKSATPQHDPIEQSNFKNSLTTTSKTPA
IPSEEEIKANLDEFAQEEYEQTSLSEIKNATQIVNHANPENKLNNTLLEF
EKDYETLSNLLFSNLDASPLNRKIKTIMPKLQEMRSFMEQATNSWVSAKG
MLDEAKDKLAESIYKRLYNGNSYRFGGSFNGRDMQHAKNLAYRAIDFASA
CIEYTQKAIDYLQQGNSCKKEIENIFKL
>gid:860238  BBK49  B. burgdorferi predicted coding region BBK49
MRLCLIKIFIIPNLVFSSLFLFESCSGFLSKKSIEQFALALKDHQENKNT
TNTSVDKNSKEIESPKDVTSSNKKTYDPILQVGSNQHMSDDPGANNKESL
PNSSPAIMQNDSHAQNNVKMEENKSATPQHDPIEQSNFKNSLTTTSKTPA
IPSEEEIKAKLDEFAQEEYEQTSLSEIKNAEQFINRANSENNLNNTLLEF
KEFHQKMSDLLFSNLSTSPLNRKIKSVKATLWVKLEEMRSFMEQATNSWG
SAKDMLDVARDKLADSIYKRLNNENGNSYWLGSNFNKRNIQDLAKRAIDL
ATECIKYMENAISFLQYGNSCRKEIENILKL
>gid:861007  BBQ06  conserved hypothetical protein
MQIFAQEKLEKGVGDIATVMKYESKKATILAPLLLNIFLSLGIGSFVQGD
YIGGGALLGSQVLGGILIMAGYMTGDIGFVTESTATVITGGVLSGIGGLT
IAASYITGIIIPFKFANRYNADLKKRLGIALAGLEPNFDIGINGDSNYRL
KNPIEYQFTWG