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2024-05-07 16:02:21

Gene list

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COG category: Cell motility
Organism: Pseudomonas syringae pv. tomato str. DC3000, DC3000

Number of genes found: 160

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPTO3580 methyl-accepting chemotaxis proteinchromosome CDS4037428 1641 - 0.603291
NA PSPTO0811 pillin, putativechromosome CDS875891 474 + 0.57173
NA PSPTO0816 type IV pilus biogenesis proteinchromosome CDS881303 402 + 0.562189
NA PSPTO1312 fimbral biosynthesis proteinchromosome CDS1443875 585 + 0.547009
NA PSPTO3818 conserved hypothetical proteinchromosome CDS4325920 2844 - 0.616385
NA PSPTO1968 flagellar protein FliL, putativechromosome CDS2154679 504 + 0.581349
NA PSPTO0263 methyl-accepting chemotaxis proteinchromosome CDS285536 1497 + 0.628591
NA PSPTO1497 sensor histidine kinase/response regulatorchromosome CDS1652485 2382 + 0.628883
NA PSPTO3237 methyl-accepting chemotaxis proteinchromosome CDS3657206 2316 + 0.59456
NA PSPTO5569 methyl-accepting chemotaxis proteinchromosome CDS6347028 1626 + 0.5123
NA PSPTO2700 hypothetical proteinchromosome CDS2994802 555 + 0.567568
NA PSPTO1323 chemotaxis protein CheV, putativechromosome CDS1452704 945 - 0.583069
NA PSPTO5029 conserved hypothetical proteinchromosome CDS5726735 471 - 0.656051
NA PSPTO1506 ompA family proteinchromosome CDS1663462 783 - 0.591315
NA PSPTO5553 methyl-accepting chemotaxis proteinchromosome CDS6325129 1923 - 0.596984
NA PSPTO3480 methyl-accepting chemotaxis proteinchromosome CDS3926984 1602 - 0.625468
NA PSPTO3310 general secretion pathway protein L, putativechromosome CDS3743950 1065 - 0.630047
NA PSPTO1805 conserved hypothetical proteinchromosome CDS1976521 465 - 0.593548
NA PSPTO1498 protein-glutamate methylesterase CheBchromosome CDS1654863 1011 + 0.611276
NA PSPTO3577 methyl-accepting chemotaxis proteinchromosome CDS4034169 1629 + 0.579497
NA PSPTO1962 flagellar protein FliJ, putativechromosome CDS2149666 450 + 0.611111
NA PSPTO4936 methyl-accepting chemotaxis proteinchromosome CDS5593402 1935 - 0.629457
NA PSPTO2616 methyl-accepting chemotaxis proteinchromosome CDS2906392 1902 + 0.582019
NA PSPTO2442 CheW domain proteinchromosome CDS2698089 1464 + 0.632514
NA PSPTO5159 methyl-accepting chemotaxis proteinchromosome CDS5867181 1917 + 0.599374
NA PSPTO4589 hypothetical proteinchromosome CDS5185621 474 - 0.590717
NA PSPTO2227 fimbrial protein, putativechromosome CDS2454099 1113 - 0.565139
NA PSPTO5030 sensor histidine kinase/response regulatorchromosome CDS5727198 5964 - 0.62391
NA PSPTO1989 conserved hypothetical proteinchromosome CDS2174586 360 + 0.641667
NA PSPTO1926 flagellar protein, putativechromosome CDS2108384 747 - 0.583668
NA PSPTOA0045 type IV pilus biogenesis proteinpDC3000A CDS44550 1182 + 0.586294
NA PSPTO2475 methyl-accepting chemotaxis proteinchromosome CDS2733477 1797 + 0.578742
NA PSPTO1949 flagellinchromosome CDS2135981 849 + 0.557126
NA PSPTO0813 hypothetical proteinchromosome CDS876876 708 + 0.538136
NA PSPTO3313 general secretion pathway protein I, putativechromosome CDS3746371 384 - 0.625
NA PSPTO4624 methyl-accepting chemotaxis proteinchromosome CDS5218750 1620 - 0.545679
NA PSPTO1496 CheW domain proteinchromosome CDS1651799 690 + 0.604348
NA PSPTO1634 conserved hypothetical proteinchromosome CDS1790464 183 + 0.502732
NA PSPTO2511 methyl-accepting chemotaxis proteinchromosome CDS2774360 1962 + 0.588685
NA PSPTO2526 methyl-accepting chemotaxis proteinchromosome CDS2789232 1680 + 0.602976
NA PSPTO3699 methyl-accepting chemotaxis proteinchromosome CDS4170590 1632 + 0.585784
NA PSPTO1059 methyl-accepting chemotaxis proteinchromosome CDS1154539 1890 - 0.595767
NA PSPTO0810 type IV pilus biogenesis proteinchromosome CDS875259 501 - 0.572854
NA PSPTO3279 methyl-accepting chemotaxis proteinchromosome CDS3704803 1626 - 0.594096
NA PSPTO2480 methyl-accepting chemotaxis proteinchromosome CDS2739439 1890 + 0.584656
NA PSPTO1494 CheW domain proteinchromosome CDS1649986 537 + 0.61825
NA PSPTO1985 motB proteinchromosome CDS2171322 888 + 0.596847
NA PSPTO0573 hypothetical proteinchromosome CDS631257 471 + 0.592357
NA PSPTO4855 membrane protein, putativechromosome CDS5500569 885 + 0.60339
NA PSPTO1495 chemotaxis protein methyltransferase CheR, putativechromosome CDS1650519 1281 + 0.629977
NA PSPTO0912 methyl-accepting chemotaxis proteinchromosome CDS992732 1656 - 0.589372
NA PSPTO3363 type II and III secretion system family proteinchromosome CDS3801024 747 + 0.574297
NA PSPTO5045 twitching motility proteinchromosome CDS5744794 1035 - 0.606763
NA PSPTO1334 methyl-accepting chemotaxis proteinchromosome CDS1464236 1653 - 0.597701
NA PSPTO2472 methyl-accepting chemotaxis proteinchromosome CDS2729060 1986 + 0.604733
NA PSPTO0081 conserved hypothetical proteinchromosome CDS101917 633 + 0.63981
NA PSPTO0927 type IV pilus biogenesis proteinchromosome CDS1007206 429 + 0.470862
NA PSPTO2254 methyl-accepting chemotaxis proteinchromosome CDS2496461 1476 - 0.632791
NA PSPTO1960 flagellar assembly protein Flih, putativechromosome CDS2147493 819 + 0.586081
NA PSPTO_B0052 type IV pilus biogenesis proteinpDC3000B CDS39856 1182 + 0.58714
NA PSPTO1317 fimbral chaperone proteinchromosome CDS1449166 783 + 0.607918
NA PSPTO3680 methyl-accepting chemotaxis proteinchromosome CDS4145626 2031 - 0.602166
NA PSPTO3098 methyl-accepting chemotaxis proteinchromosome CDS3480906 1929 - 0.583204
NA PSPTO0319 type IV pilus biogenesis proteinchromosome CDS345891 1785 - 0.611205
NA PSPTO0466 methyl-accepting chemotaxis proteinchromosome CDS512022 1626 - 0.588561
NA PSPTO5554 methyl-accepting chemotaxis proteinchromosome CDS6327228 2031 - 0.608075
NA PSPTO1066 methyl-accepting chemotaxis proteinchromosome CDS1164246 2058 + 0.610787
NA PSPTO1950 flagellin FlaG, putativechromosome CDS2136896 399 + 0.508772
NA PSPTO0878 conserved domain proteinchromosome CDS949832 318 + 0.591195
NA PSPTO4541 methyl-accepting chemotaxis proteinchromosome CDS5129126 1626 + 0.589176
NA PSPTO1646 LysM domain proteinchromosome CDS1803599 2154 + 0.634169
NA PSPTO3685 methyl-accepting chemotaxis proteinchromosome CDS4150495 1641 + 0.594759
NA PSPTO1313 pili assembly chaperonechromosome CDS1444523 753 + 0.549801
NA PSPTO1493 methyl-accepting chemotaxis proteinchromosome CDS1648356 1623 + 0.604436
NA PSPTO0117 methyl-accepting chemotaxis proteinchromosome CDS138969 1977 + 0.611027
NA PSPTO2714 protein-glutamate methylesterase, putativechromosome CDS3012599 615 + 0.570732
NA PSPTO3379 methyl-accepting chemotaxis proteinchromosome CDS3820066 1680 - 0.595833
NA PSPTO2448 methyl-accepting chemotaxis proteinchromosome CDS2702812 1941 - 0.5966
NA PSPTO1061 methyl-accepting chemotaxis proteinchromosome CDS1156819 1881 + 0.574163
NA PSPTO5230 flagellar protein FliL, putativechromosome CDS5950789 408 - 0.556373
NA PSPTO2713 chemotaxis protein methyltransferase CheR, putativechromosome CDS3011736 867 + 0.554787
NA PSPTO2997 methyl-accepting chemotaxis proteinchromosome CDS3369813 1629 - 0.585635
NA PSPTO1927 chemotaxis protein CheV, putativechromosome CDS2109221 927 + 0.535059
NA PSPTO1925 negative regulator of flagellin synthesis FlgM, putativechromosome CDS2107909 315 - 0.536508
NA PSPTO0815 type IV pilus-associated protein, putativechromosome CDS878088 3204 + 0.551498
NA PSPTO4209 hypothetical proteinchromosome CDS4742177 672 - 0.587798
NA PSPTO0909 chemotaxis protein CheD, putativechromosome CDS990834 507 - 0.575937
NA PSPTO3524 chemotaxis protein CheV, putativechromosome CDS3977175 927 - 0.574973
NA PSPTO3291 methyl-accepting chemotaxis proteinchromosome CDS3718924 1629 - 0.564764
NA PSPTO0814 conserved hypothetical proteinchromosome CDS877595 507 + 0.540434
NA PSPTO5160 methyl-accepting chemotaxis proteinchromosome CDS5869300 1944 + 0.591564
NA PSPTO3033 twitching motility proteinchromosome CDS3409902 1176 - 0.591837
NA PSPTO0995 methyl-accepting chemotaxis proteinchromosome CDS1085145 1674 - 0.590203
NA PSPTO3393 tail tape meausure proteinchromosome CDS3833793 2751 - 0.601599
cheA-1 PSPTO0913 chemotaxis sensor histidine kinase CheAchromosome CDS994416 2103 - 0.623871
cheA-2 PSPTO1982 chemotaxis sensor histidine kinase CheAchromosome CDS2167106 2247 + 0.601246
cheB-1 PSPTO0908 protein-glutamate methylesterase CheBchromosome CDS989768 1077 - 0.608171
cheB-2 PSPTO1983 protein-glutamate methylesterase CheBchromosome CDS2169403 1173 + 0.617221
cheR-1 PSPTO0910 chemotaxis protein methyltransferase CheRchromosome CDS991337 810 - 0.57037
cheR-2 PSPTO1928 chemotaxis protein methyltransferase CheRchromosome CDS2110184 843 + 0.58363
cheW-1 PSPTO0911 chemotaxis protein CheWchromosome CDS992156 540 - 0.62037
cheW-2 PSPTO1988 chemotaxis protein CheWchromosome CDS2174064 480 + 0.539583
cheZ PSPTO1981 chemotaxis protein CheZchromosome CDS2166386 687 + 0.547307
fimA PSPTO2230 type I pilus biogensis protein FimAchromosome CDS2458675 552 - 0.592391
fimD PSPTO2228 outer membrane usher protein fimDchromosome CDS2455258 2514 - 0.59825
flgB PSPTO1933 flagellar basal-body rod protein FlgBchromosome CDS2113970 408 + 0.568627
flgC PSPTO1934 flagellar basal-body rod protein FlgCchromosome CDS2114381 441 + 0.560091
flgD PSPTO1935 basal-body rod modification protein FlgDchromosome CDS2114837 690 + 0.576812
flgE-1 PSPTO1936 flagellar hook protein FlgEchromosome CDS2115552 1326 + 0.574661
flgE-2 PSPTO1937 flagellar hook protein FlgEchromosome CDS2117067 1761 + 0.607041
flgF PSPTO1939 flagellar basal-body rod protein FlgFchromosome CDS2119303 741 + 0.612686
flgG PSPTO1940 flagellar basal-body rod protein FlgGchromosome CDS2120090 789 + 0.609632
flgH PSPTO1941 flagellar L-ring protein FlgHchromosome CDS2120963 714 + 0.612045
flgI PSPTO1942 flagellar P-ring protein FlgIchromosome CDS2121690 1110 + 0.616216
flgJ PSPTO1943 peptidoglycan hydrolase FlgJchromosome CDS2122810 1251 + 0.614708
flgK PSPTO1944 flagellar hook-associated protein FlgKchromosome CDS2124072 2061 + 0.597283
flgL PSPTO1945 flagellar hook-associated protein FlgLchromosome CDS2126146 1593 + 0.596359
flhA PSPTO1976 flagellar biosynthesis protein FlhAchromosome CDS2160485 2130 + 0.585916
flhB PSPTO1975 flagellar biosynthetic protein FlhBchromosome CDS2158962 1137 + 0.591029
flhF PSPTO1977 flagellar biosynthesis protein FlhFchromosome CDS2162626 1329 + 0.613243
fliD PSPTO1951 flagellar hook-associated protein FliDchromosome CDS2137378 1479 + 0.585531
fliE PSPTO1957 flagellar hook-basal body complex protein FliEchromosome CDS2144312 357 + 0.54902
fliF PSPTO1958 flagellar M-ring protein FliFchromosome CDS2144684 1785 + 0.602241
fliG PSPTO1959 flagellar motor switch protein FliGchromosome CDS2146476 1002 + 0.582834
fliI PSPTO1961 flagellum-specific ATP synthase FliIchromosome CDS2148301 1359 + 0.640177
fliK PSPTO1966 flagellar hook-length control protein FliKchromosome CDS2152700 1425 + 0.616842
fliM PSPTO1969 flagellar motor switch protein FliMchromosome CDS2155192 969 + 0.588235
fliN PSPTO1970 flagellar motor switch protein FliNchromosome CDS2156222 459 + 0.605664
fliO PSPTO1971 flagellar protein FliOchromosome CDS2156681 441 + 0.628118
fliP PSPTO1972 flagellar biosynthetic protein FliPchromosome CDS2157121 753 + 0.569721
fliQ PSPTO1973 flagellar biosynthetic protein FliQchromosome CDS2157899 270 + 0.585185
fliR PSPTO1974 flagellar biosynthetic protein FliRchromosome CDS2158184 777 + 0.594595
fliS PSPTO1952 flagellar protein FliSchromosome CDS2138982 390 + 0.582051
gspD PSPTO3307 general secretion pathway protein Dchromosome CDS3740495 2292 - 0.608639
gspE PSPTO3317 general secretion pathway protein Echromosome CDS3748853 1758 - 0.624005
gspF PSPTO3316 general secretion pathway protein Fchromosome CDS3747654 1203 - 0.627598
gspG PSPTO3315 general secretion pathway protein Gchromosome CDS3747197 432 - 0.587963
gspH PSPTO3314 general secretion pathway protein Hchromosome CDS3746754 435 - 0.62069
hrcC PSPTO1389 outer-membrane type III secretion protein HrcCchromosome CDS1529049 1941 + 0.578568
hrcN PSPTO1400 type III secretion cytoplasmic ATPase HrcNchromosome CDS1537029 1350 - 0.653333
hrcQb PSPTO1396 type III secretion protein HrcQbchromosome CDS1534888 414 - 0.60628
mdcE PSPTO5083 malonate decarboxylase, gamma subunitchromosome CDS5786806 801 - 0.641698
motA-1 PSPTO1984 chemotaxis motA proteinchromosome CDS2170575 741 + 0.60054
motA-2 PSPTO4953 chemotaxis motA proteinchromosome CDS5613150 852 - 0.577465
motB PSPTO4952 chemotaxis motB proteinchromosome CDS5612121 1026 - 0.599415
nfrB PSPTO1194 bacteriophage N4 adsorption protein Bchromosome CDS1307737 2121 - 0.602546
papD PSPTO2229 chaperone protein PapDchromosome CDS2457811 756 - 0.582011
pilB PSPTO0926 type IV pilus biogenesis protein PilBchromosome CDS1005287 1695 - 0.543363
pilC PSPTO0925 type IV pilus biogenesis protein PilCchromosome CDS1004067 1218 - 0.478654
pilD PSPTO0924 type IV pilus prepilin peptidase PilDchromosome CDS1003193 873 - 0.592211
pilF PSPTO1432 type IV pilus biogenesis protein PilFchromosome CDS1569793 759 + 0.561265
pilI PSPTO5032 type IV pilus protein PilIchromosome CDS5735284 540 - 0.614815
pilJ PSPTO5031 type IV pilus biogenesis protein PilJchromosome CDS5733209 2043 - 0.609887
pilM PSPTO5132 type IV pilus biogenesis protein PilMchromosome CDS5839427 1065 - 0.588732
pilN PSPTO5131 type IV pilus biogenesis protein PilNchromosome CDS5838801 627 - 0.596491
pilO PSPTO5130 type IV pilus biogenesis protein PilOchromosome CDS5838181 624 - 0.564103
pilP PSPTO5129 type IV pilus biogenesis protein PilPchromosome CDS5837657 528 - 0.600379
pilZ PSPTO3825 type IV pilus biogenesis protein PilZchromosome CDS4333852 357 - 0.593838
traW-1 PSPTO_B0067 traW proteinpDC3000B CDS56621 1215 + 0.619753
traW-2 PSPTOA0062 traW proteinpDC3000A CDS61946 1215 + 0.620576