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2024-05-04 06:55:59

Gene list

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COG category: Cell motility
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 102

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0277 putative methyl-accepting chemotaxis proteinchromosome II CDS324135 1467 + 0.390593
NA PSHAa0924 putative type IV pilus biogenesis protein; membrane proteinchromosome I CDS952891 561 + 0.449198
NA PSHAb0140 putative lytic cell-wall binding lipoproteinchromosome II CDS173453 1734 - 0.392157
NA PSHAa1304 putative orphan proteinchromosome I CDS1359838 447 - 0.409396
NA PSHAb0340 putative Outer membrane protein with a TonB boxchromosome II CDS391677 3114 - 0.392742
NA PSHAa0848 putative methyl-accepting chemotaxis proteinchromosome I CDS875151 1920 - 0.400521
NA PSHAa2651 putative Methyl-accepting chemotaxis proteinchromosome I CDS2805577 1926 - 0.398235
NA PSHAa2733 putative methyl-accepting chemotaxis proteinchromosome I CDS2898149 1881 - 0.391281
NA PSHAa1839 conserved protein of unknown functionchromosome I CDS1932787 1368 - 0.383041
NA PSHAb0518 putative Chemotactic transducerchromosome II CDS584117 1890 + 0.393651
NA PSHAa0492 conserved protein of unknown function ; putative CheC-like proteinchromosome I CDS507902 468 - 0.393162
NA PSHAa2122 conserved protein of unknown function ; putative membrane proteinchromosome I CDS2242980 2406 - 0.373234
NA PSHAa0782 putative flagellin (fliC-like)chromosome I CDS813803 834 + 0.410072
NA PSHAa1036 putative orphan protein ; putative membrane proteinchromosome I CDS1073382 789 + 0.385298
NA PSHAa2124 putative orphan proteinchromosome I CDS2246116 699 - 0.34907
NA PSHAa2638 putative Methyl-accepting chemotaxis proteinchromosome I CDS2790750 2016 + 0.402282
NA PSHAa0383 putative Pilus biogenesis protein tapA precursorchromosome I CDS398670 396 - 0.338384
NA PSHAa0817 conserved protein of unknown function; putative cheW-like proteinchromosome I CDS848792 717 + 0.400279
NA PSHAb0121 putative Methyl-accepting or sensory transducer chemotaxis proteinchromosome II CDS147380 1623 - 0.385089
NA PSHAa0925 conserved protein of unknown functionchromosome I CDS953453 996 + 0.365462
NA PSHAa2387 putative chemotaxis sensory proteinchromosome I CDS2536827 1638 + 0.403541
NA PSHAa0814 putative Chemotaxis motA proteinchromosome I CDS846240 765 + 0.431373
NA PSHAa2312 putative orphan proteinchromosome I CDS2453544 399 + 0.380952
NA PSHAa0929 putative Type IV pilus biogenesis proteinchromosome I CDS958542 537 - 0.363128
NA PSHAa0094 putative small periplasmic lipoproteinchromosome I CDS96998 195 - 0.4
NA PSHAb0184 methyl-accepting chemotaxis proteinchromosome II CDS223059 2121 + 0.406884
NA PSHAa2856 conserved protein of unknown functionchromosome I CDS3030049 309 - 0.446602
NA PSHAa0711 putative Methyl-accepting chemotaxis proteinchromosome I CDS745127 1668 + 0.390288
NA PSHAa2484 putative Bacterial chemotaxis sensory transducerchromosome I CDS2636047 1209 + 0.378825
NA PSHAa0376 conserved protein of unknown function ; putative CpxP (P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated) domaichromosome I CDS392345 486 + 0.411523
NA PSHAa0930 putative Type IV pilus biogenesis proteinchromosome I CDS959154 552 - 0.413043
NA PSHAa1512 putative orphan proteinchromosome I CDS1587450 339 - 0.380531
NA PSHAa0927 conserved protein of unknown function ; putative pilin biogenesis proteinchromosome I CDS954941 3171 + 0.398297
NA PSHAa0642 putative orphan proteinchromosome I CDS662310 957 - 0.409613
NA PSHAa1556 putative orphan protein; could be an antifreeze proteinchromosome I CDS1612390 7233 + 0.459284
NA PSHAa1187 conserved protein of unknown functionchromosome I CDS1234753 771 + 0.402075
cheA PSHAa0812 chemotaxis protein cheAchromosome I CDS842843 2178 + 0.411387
cheB PSHAa0813 chemotaxis response regulator protein-glutamate methylesterasechromosome I CDS845072 1176 + 0.435374
cheR PSHAa0767 Chemotaxis protein methyltransferase CheRchromosome I CDS799523 831 + 0.383875
cheV PSHAa0766 chemotaxis proteinchromosome I CDS798567 936 + 0.398504
cheW PSHAa0818 purine-binding chemotaxis proteinchromosome I CDS849533 498 + 0.38755
cheZ PSHAa0811 chemotaxis protein cheZchromosome I CDS842066 762 + 0.405512
exeD PSHAa0232 General secretion pathway protein Dchromosome I CDS245801 2067 + 0.41074
exeE PSHAa0233 General secretion pathway protein E (Type II traffic warden ATPase)chromosome I CDS247860 1566 + 0.430396
flaG PSHAa0783 putative flagellin proteinchromosome I CDS814810 417 + 0.422062
flgA PSHAa0765 putative flagellar biosynthesis; assembly of basal-body periplasmic P-ringchromosome I CDS797721 708 - 0.385593
flgB PSHAa0769 flagellar biosynthesis; cell-proximal portion of basal-body rodchromosome I CDS800932 336 + 0.422619
flgC PSHAa0770 flagellar biosynthesis; cell-proximal portion of basal-body rodchromosome I CDS801273 432 + 0.400463
flgD PSHAa0771 flagellar biosynthesis; initiation of hook assemblychromosome I CDS801718 678 + 0.41003
flgE PSHAa0772 flagellar biosynthesis; hook proteinchromosome I CDS802445 1365 + 0.437363
flgF PSHAa0773 flagellar biosynthesis; cell-proximal portion of basal-body rodchromosome I CDS804237 744 + 0.450269
flgG PSHAa0774 flagellar biosynthesis; cell-distal portion of basal-body rodchromosome I CDS805002 789 + 0.439797
flgH PSHAa0775 flagellar biosynthesis; basal-body outer-membrane L (lipopolysaccharide layer) ring proteinchromosome I CDS805807 684 + 0.416667
flgI PSHAa0776 flagellar P-ring protein precursor (Basal body P-ring protein)chromosome I CDS806503 1095 + 0.447489
flgJ PSHAa0777 putative flagellar biosynthesischromosome I CDS807725 996 + 0.414659
flgK PSHAa0778 putative flagellar hook-associatedchromosome I CDS808722 2013 + 0.437158
flgL PSHAa0779 putative flagellar synthesis; flagellar regulon; hook-associated proteinchromosome I CDS810737 1257 + 0.420843
flgM PSHAa0764 putative negative regulator of flagellin synthesischromosome I CDS797324 321 - 0.404984
flgN PSHAa0763 putative flagellar biosynthesis chaperonechromosome I CDS796900 432 - 0.363426
flhA PSHAa0806 flagellar biosynthesis protein, putative export proteinchromosome I CDS836489 2037 + 0.42808
flhB PSHAa0805 Flagellar biosynthetic protein flhB, putative part of export apparatus for flagellar proteinschromosome I CDS835211 1131 + 0.409372
flhF PSHAa0807 putative Flagellar biosynthetic protein FlhF(Flagella associated GTP-binding protein)chromosome I CDS838546 1491 + 0.438632
fliC PSHAa0781 flagellinchromosome I CDS812675 822 + 0.418491
fliD PSHAa0784 putative flagellar hook-associated proteinchromosome I CDS815307 1407 + 0.404407
fliE PSHAa0791 flagellar biosynthesis; basal-body componentchromosome I CDS823477 291 + 0.419244
fliF PSHAa0792 flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar proteinchromosome I CDS823788 1716 + 0.445804
fliG PSHAa0793 flagellar biosynthesis; component of motor switching and energizingchromosome I CDS825496 1041 + 0.428434
fliH PSHAa0794 putative flagellar biosynthesis; export of flagellar proteinschromosome I CDS826555 801 + 0.421973
fliI PSHAa0795 flagellum-specific ATP synthasechromosome I CDS827374 1335 + 0.474157
fliJ PSHAa0796 flagellar proteinchromosome I CDS828771 387 + 0.387597
fliK PSHAa0797 putative flagellar hook-length control proteinchromosome I CDS829295 1581 + 0.4105
fliL PSHAa0798 putative flagellar proteinchromosome I CDS830933 531 + 0.39548
fliM PSHAa0799 flagellar biosynthesis; component of motor switch and energizingchromosome I CDS831473 1092 + 0.417582
fliN PSHAa0800 flagellar biosynthesis; component of motor switch and energizingchromosome I CDS832585 399 + 0.421053
fliO PSHAa0801 putative flagellar proteinchromosome I CDS832986 378 + 0.373016
fliP PSHAa0802 flagellar biosynthesischromosome I CDS833368 741 + 0.415655
fliQ PSHAa0803 flagellar biosynthesischromosome I CDS834150 270 + 0.392593
fliR PSHAa0804 flagellar biosynthetic proteinchromosome I CDS834506 696 + 0.428161
fliS PSHAa0786 putative flagellar biosynthesis proteinchromosome I CDS817432 402 - 0.368159
gspF PSHAa0234 putative general secretion pathway protein Fchromosome I CDS249428 1236 + 0.42233
gspG PSHAa0235 putative general secretion pathway protein G [Precursor]chromosome I CDS250765 387 + 0.405685
gspH PSHAa0236 putative general secretion pathway protein H precursorchromosome I CDS251201 585 + 0.408547
gspI PSHAa0237 putative general secretion pathway protein I [precursor]chromosome I CDS251785 378 + 0.407407
motA PSHAa2363 Flagellar motor component (Chemotaxis motA protein)chromosome I CDS2508820 687 - 0.39738
motB PSHAa0815 putative chemotaxis proteinchromosome I CDS847013 960 + 0.423958
motB PSHAa2362 sodium-driven polar flagellar proteinchromosome I CDS2507897 921 - 0.41911
mshE PSHAa2692 putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV)chromosome I CDS2848887 1728 - 0.427083
mshG PSHAa2691 putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV)chromosome I CDS2847680 1221 - 0.384111
mshO PSHAa2686 putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshO (pilus type IV)chromosome I CDS2844669 843 - 0.3879
pctC PSHAa2742 putative chemotactic transducer PctCchromosome I CDS2909908 2028 + 0.414694
pilB PSHAa0378 type IV pilus biogenesis protein PilBchromosome I CDS393375 1674 - 0.4092
pilC PSHAa0381 type IV pilus biogenesis protein PilCchromosome I CDS396727 1227 - 0.427873
pilD PSHAa0380 Type 4 prepilin-like proteins leader peptide processing enzymechromosome I CDS395803 876 - 0.416667
pilE PSHAa0928 putative fimbrial protein precursorchromosome I CDS958131 411 + 0.389294
pilM PSHAa2720 putative Type IV pilus biogenesis protein PilMchromosome I CDS2882730 1080 - 0.409259
pilN PSHAa2719 putative Type IV pilus biogenesis protein PilNchromosome I CDS2882170 573 - 0.359511
pilO PSHAa2718 putative Type IV pilus biogenesis protein PilOchromosome I CDS2881578 603 - 0.363184
pilP PSHAa2717 putative Type IV pilus biogenesis protein PilPchromosome I CDS2881042 537 - 0.378026
pilT PSHAa2603 twitching motility protein PilT (type IV pili)chromosome I CDS2748148 963 - 0.420561
pilU PSHAa2602 twitching motility protein PilU (type IV pili)chromosome I CDS2747002 1137 - 0.423043
pilZ PSHAa1801 type 4 fimbrial biogenesis protein PILZchromosome I CDS1891761 327 - 0.40367
ppdD PSHAa0384 putative prepilin peptidase dependent protein Dchromosome I CDS399118 432 - 0.416667