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2024-05-02 22:57:14

Gene list

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COG category: Cell motility
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236

Number of genes found: 188

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodoferax ferrireducens DSM 15236, DSM 15236
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rfer_1514 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS1630281 1452 + 0.636364
NA Rfer_3878 twitching motility proteinchromosome CDS4329465 1044 - 0.590996
NA Rfer_2922 Pilus assembly protein, PilQchromosome CDS3232467 543 + 0.569061
NA Rfer_0042 Heme exporter protein D (CcmD)chromosome CDS46159 180 - 0.522222
NA Rfer_0318 glucose-methanol-choline oxidoreductasechromosome CDS316348 1614 - 0.627014
NA Rfer_3698 CBSchromosome CDS4131794 867 - 0.576701
NA Rfer_0925 methyl-accepting chemotaxis sensory transducerchromosome CDS973402 1659 + 0.579867
NA Rfer_3598 SecE subunit of protein translocation complexchromosome CDS4009059 384 - 0.523438
NA Rfer_2225 methyl-accepting chemotaxis sensory transducerchromosome CDS2439479 1752 + 0.598173
NA Rfer_1265 methylationchromosome CDS1359764 483 - 0.492754
NA Rfer_3163 basic membrane lipoproteinchromosome CDS3499006 1164 - 0.580756
NA Rfer_2904 Prepilin peptidasechromosome CDS3214374 843 + 0.582444
NA Rfer_1373 CheW-like proteinchromosome CDS1480006 531 + 0.568738
NA Rfer_0556 flagellar basal body-associated protein FliLchromosome CDS580958 600 + 0.578333
NA Rfer_1672 signal recognition particle-docking protein FtsYchromosome CDS1803828 1095 + 0.617352
NA Rfer_3877 twitching motility proteinchromosome CDS4328256 1137 - 0.582234
NA Rfer_1492 preprotein translocase, SecG subunitchromosome CDS1606138 354 + 0.548023
NA Rfer_4242 60 kDa inner membrane insertion proteinchromosome CDS4709438 1716 - 0.55711
NA Rfer_0903 CheW proteinchromosome CDS946262 558 + 0.580645
NA Rfer_2749 methyl-accepting chemotaxis sensory transducerchromosome CDS3035195 1737 - 0.572827
NA Rfer_2665 methylationchromosome CDS2934237 570 + 0.547368
NA Rfer_2939 toluene tolerancechromosome CDS3252966 573 + 0.56719
NA Rfer_2673 Biopolymer transport protein ExbD/TolRchromosome CDS2940916 420 + 0.578571
NA Rfer_2350 methyl-accepting chemotaxis sensory transducerchromosome CDS2583144 1548 - 0.607235
NA Rfer_3286 methyl-accepting chemotaxis sensory transducerchromosome CDS3648191 1500 + 0.593333
NA Rfer_2029 methyl-accepting chemotaxis sensory transducerchromosome CDS2188291 1590 + 0.632075
NA Rfer_0562 flagellar biosynthetic protein FliRchromosome CDS584449 723 + 0.542185
NA Rfer_0550 flagellar M-ring protein FliFchromosome CDS574319 1767 + 0.628183
NA Rfer_3013 MCP methyltransferase, CheR-typechromosome CDS3322252 2634 - 0.593394
NA Rfer_3714 flagellar basal-body rod protein FlgBchromosome CDS4145768 453 + 0.629139
NA Rfer_4223 SecY proteinchromosome CDS4695276 1311 - 0.485126
NA Rfer_1531 MotA/TolQ/ExbB proton channelchromosome CDS1649442 903 + 0.66113
NA Rfer_0790 peptidase A24A, prepilin type IVchromosome CDS827401 579 + 0.65285
NA Rfer_3609 methyl-accepting chemotaxis sensory transducerchromosome CDS4020874 1791 + 0.631491
NA Rfer_3026 protein of unknown function DUF21chromosome CDS3340683 1329 - 0.625282
NA Rfer_3341 methylationchromosome CDS3708376 549 - 0.575592
NA Rfer_0662 ATPasechromosome CDS686641 1107 + 0.561879
NA Rfer_0904 MCP methyltransferase, CheR-typechromosome CDS946987 804 + 0.563433
NA Rfer_3155 tetraacyldisaccharide 4'-kinasechromosome CDS3492187 1068 + 0.648876
NA Rfer_3119 methyl-accepting chemotaxis sensory transducerchromosome CDS3458105 1665 - 0.559159
NA Rfer_0905 CheD, stimulates methylation of MCP proteinschromosome CDS947792 522 + 0.570881
NA Rfer_3918 glucose-methanol-choline oxidoreductasechromosome CDS4375506 1710 + 0.637427
NA Rfer_3404 Death-on-curing proteinchromosome CDS3789501 399 - 0.566416
NA Rfer_3703 OmpA/MotBchromosome CDS4135627 945 + 0.593651
NA Rfer_2672 MotA/TolQ/ExbB proton channelchromosome CDS2940210 693 + 0.620491
NA Rfer_3707 flagellar biosynthesis protein FlhAchromosome CDS4138924 2082 + 0.618156
NA Rfer_1480 methyl-accepting chemotaxis sensory transducerchromosome CDS1591450 1614 - 0.600372
NA Rfer_0757 Biopolymer transport protein ExbD/TolRchromosome CDS790968 429 + 0.60373
NA Rfer_1118 Biopolymer transport protein ExbD/TolRchromosome CDS1202892 429 - 0.566434
NA Rfer_0633 flagellar protein FliSchromosome CDS658333 462 + 0.577922
NA Rfer_1120 MotA/TolQ/ExbB proton channelchromosome CDS1203822 861 - 0.61324
NA Rfer_3610 methyl-accepting chemotaxis sensory transducerchromosome CDS4022766 1536 + 0.634115
NA Rfer_2604 Type I secretion outer membrane protein, TolCchromosome CDS2868402 1329 + 0.629797
NA Rfer_3361 type II secretion system proteinchromosome CDS3732227 1239 + 0.635997
NA Rfer_3331 general secretion pathway protein, ATPasechromosome CDS3696866 933 - 0.59164
NA Rfer_0568 CheW proteinchromosome CDS590292 489 + 0.537832
NA Rfer_2355 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensorchromosome CDS2591885 3027 + 0.617443
NA Rfer_0572 glucose-methanol-choline oxidoreductasechromosome CDS593580 1596 - 0.619048
NA Rfer_2137 GTP-binding protein TypAchromosome CDS2318133 1824 + 0.582237
NA Rfer_0659 lipopolysaccharide biosynthesischromosome CDS682528 1575 + 0.56381
NA Rfer_3332 type II and III secretion system proteinchromosome CDS3697798 1845 - 0.617886
NA Rfer_0630 flagellin-likechromosome CDS653566 1419 + 0.59549
NA Rfer_2092 TolB-likechromosome CDS2266481 1278 + 0.587637
NA Rfer_0621 conserved hypothetical proteinchromosome CDS645295 705 + 0.560284
NA Rfer_2957 twin-arginine translocation protein TatBchromosome CDS3265380 465 + 0.610753
NA Rfer_3712 anti-sigma-28 factor, FlgMchromosome CDS4144423 327 - 0.605505
NA Rfer_0631 flagellin-likechromosome CDS655212 1416 + 0.595339
NA Rfer_0543 type II secretion system protein Echromosome CDS566410 1389 + 0.650828
NA Rfer_2789 methyl-accepting chemotaxis sensory transducerchromosome CDS3078859 1590 - 0.597484
NA Rfer_0553 ATPase FliI/YscNchromosome CDS577783 1416 + 0.638418
NA Rfer_2064 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2234832 1500 - 0.671333
NA Rfer_1533 Biopolymer transport protein ExbD/TolRchromosome CDS1650763 432 + 0.618056
NA Rfer_0570 CheD, stimulates methylation of MCP proteinschromosome CDS591776 705 + 0.577305
NA Rfer_0898 methyl-accepting chemotaxis sensory transducerchromosome CDS940496 1140 + 0.609649
NA Rfer_1374 methyl-accepting chemotaxis sensory transducerchromosome CDS1480557 2280 + 0.567544
NA Rfer_2956 twin-arginine translocation protein, TatA/E familychromosome CDS3265097 240 + 0.554167
NA Rfer_3174 MotA/TolQ/ExbB proton channelchromosome CDS3510431 906 - 0.619205
NA Rfer_1094 ABC transporter relatedchromosome CDS1171457 1071 - 0.600374
NA Rfer_0567 CheA signal transduction histidine kinaseschromosome CDS588078 2190 + 0.579452
NA Rfer_0632 flagellar hook-associated 2-likechromosome CDS656799 1488 + 0.580645
NA Rfer_3717 protein of unknown function DUF1078-likechromosome CDS4147374 1215 + 0.607407
NA Rfer_2920 Fimbrial assemblychromosome CDS3231151 636 + 0.56761
NA Rfer_0552 flagellar assembly protein FliHchromosome CDS577110 684 + 0.631579
NA Rfer_0756 MotA/TolQ/ExbB proton channelchromosome CDS790294 654 + 0.642202
NA Rfer_2921 Pilus assembly protein, PilOchromosome CDS3231799 672 + 0.546131
NA Rfer_0991 CheW proteinchromosome CDS1042665 525 - 0.592381
NA Rfer_0554 Flagellar export FliJchromosome CDS579195 468 + 0.570513
NA Rfer_0534 General secretion pathway protein Gchromosome CDS558642 444 + 0.608108
NA Rfer_0569 MCP methyltransferase, CheR-typechromosome CDS590817 897 + 0.57971
NA Rfer_3705 Chemotaxis phosphatase, CheZchromosome CDS4137027 648 + 0.564815
NA Rfer_0810 toluene tolerancechromosome CDS846869 639 + 0.56338
NA Rfer_1157 MotA/TolQ/ExbB proton channelchromosome CDS1243146 693 + 0.621934
NA Rfer_0413 outer membrane efflux proteinchromosome CDS422676 1272 - 0.605346
NA Rfer_0364 response regulator receiver modulated CheW proteinchromosome CDS365140 954 - 0.612159
NA Rfer_2902 type II secretion system protein Echromosome CDS3211403 1734 + 0.583622
NA Rfer_3719 Flagellar basal-body rod FlgGchromosome CDS4149404 783 + 0.616858
NA Rfer_1312 protein-export protein SecBchromosome CDS1404056 468 + 0.596154
NA Rfer_3310 conserved hypothetical proteinchromosome CDS3674448 501 - 0.59481
NA Rfer_2664 methylationchromosome CDS2933744 483 + 0.546584
NA Rfer_2342 methyl-accepting chemotaxis sensory transducerchromosome CDS2574888 1527 - 0.593975
NA Rfer_0990 methyl-accepting chemotaxis sensory transducerchromosome CDS1041023 1629 - 0.615101
NA Rfer_1431 lipoprotein signal peptidasechromosome CDS1541980 510 - 0.619608
NA Rfer_1476 CheW proteinchromosome CDS1587182 558 + 0.535842
NA Rfer_3722 Mannosyl-glycoproteinendo-beta-N-acetylglucosamidasechromosome CDS4152106 927 + 0.615965
NA Rfer_1532 Biopolymer transport protein ExbD/TolRchromosome CDS1650348 426 + 0.633803
NA Rfer_0549 flagellar hook-basal body complex proteinchromosome CDS573900 318 - 0.622642
NA Rfer_3706 type III secretion exporterchromosome CDS4137770 1158 + 0.606218
NA Rfer_4106 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS4583146 1458 - 0.713992
NA Rfer_3721 flagellar P-ring proteinchromosome CDS4150961 1146 + 0.636126
NA Rfer_3023 methyl-accepting chemotaxis sensory transducerchromosome CDS3337191 1614 - 0.616481
NA Rfer_0558 Flagellar motor switch FliNchromosome CDS582573 420 + 0.571429
NA Rfer_2257 type IV pilus assembly PilZchromosome CDS2470596 363 + 0.550964
NA Rfer_0561 flagellar biosynthetic protein FliQchromosome CDS584130 258 + 0.581395
NA Rfer_2481 methyl-accepting chemotaxis sensory transducerchromosome CDS2734927 1740 - 0.626437
NA Rfer_3723 Flagellar hook-associated proteinchromosome CDS4153029 1935 + 0.61292
NA Rfer_2357 CheB methylesterasechromosome CDS2596949 441 + 0.596372
NA Rfer_3718 Flagellar basal-body rod FlgFchromosome CDS4148629 741 + 0.650472
NA Rfer_0902 methyl-accepting chemotaxis sensory transducerchromosome CDS944595 1653 + 0.571083
NA Rfer_3708 GTP-binding signal recognition particle SRP54, G-domainchromosome CDS4141002 1440 + 0.647917
NA Rfer_0924 CheW proteinchromosome CDS972858 525 + 0.605714
NA Rfer_1375 CheA signal transduction histidine kinaseschromosome CDS1482881 5667 + 0.585142
NA Rfer_3360 type II secretion system protein Echromosome CDS3730463 1758 + 0.649602
NA Rfer_3473 regulator of competence-specific geneschromosome CDS3864186 654 - 0.619266
NA Rfer_0557 flagellar motor switch protein FliMchromosome CDS581579 990 + 0.523232
NA Rfer_3715 flagellar basal-body rod protein FlgCchromosome CDS4146248 405 + 0.602469
NA Rfer_2935 ABC transporter relatedchromosome CDS3249945 816 + 0.601716
NA Rfer_3184 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3521847 1428 + 0.654762
NA Rfer_0544 General secretion pathway protein Fchromosome CDS567813 1236 + 0.649676
NA Rfer_2354 methyl-accepting chemotaxis sensory transducerchromosome CDS2590184 1665 + 0.626426
NA Rfer_2660 methylationchromosome CDS2927373 618 + 0.556634
NA Rfer_3449 methyl-accepting chemotaxis sensory transducerchromosome CDS3837155 1899 - 0.538178
NA Rfer_3342 signal recognition particle proteinchromosome CDS3709136 1365 - 0.610256
NA Rfer_3916 ABC transporter relatedchromosome CDS4373392 816 - 0.67402
NA Rfer_3724 flagellin-likechromosome CDS4154990 1233 + 0.635848
NA Rfer_3153 MotA/TolQ/ExbB proton channelchromosome CDS3490628 666 + 0.629129
NA Rfer_0799 type II secretion system protein Echromosome CDS835658 1359 + 0.638705
NA Rfer_0901 CheA signal transduction histidine kinaseschromosome CDS942385 2163 + 0.600092
NA Rfer_1284 ABC transporter relatedchromosome CDS1376749 1038 - 0.624277
NA Rfer_3881 putative acyltransferasechromosome CDS4332698 831 + 0.670277
NA Rfer_2923 type II and III secretion system proteinchromosome CDS3233006 2133 + 0.575715
NA Rfer_1888 CheC, inhibitor of MCP methylationchromosome CDS2025912 609 - 0.568145
NA Rfer_3720 flagellar L-ring proteinchromosome CDS4150195 732 + 0.622951
NA Rfer_0906 response regulator receiver modulated CheB methylesterasechromosome CDS948310 1056 + 0.614583
NA Rfer_1119 Biopolymer transport protein ExbD/TolRchromosome CDS1203344 435 - 0.588506
NA Rfer_3866 protein-export membrane protein SecDchromosome CDS4316769 1881 - 0.598086
NA Rfer_2958 Sec-independent protein translocase TatCchromosome CDS3265844 792 + 0.57702
NA Rfer_0470 CheW proteinchromosome CDS483032 2547 + 0.612878
NA Rfer_1741 Peptidase S26A, signal peptidase Ichromosome CDS1878074 966 + 0.563147
NA Rfer_3865 SecF proteinchromosome CDS4315792 954 - 0.562893
NA Rfer_1278 phage integrasechromosome CDS1370040 2034 - 0.637168
NA Rfer_3989 lipid A biosynthesis acyltransferasechromosome CDS4451808 915 + 0.590164
NA Rfer_0793 type II and III secretion system proteinchromosome CDS830247 1716 + 0.634615
NA Rfer_0120 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorchromosome CDS123047 1560 - 0.635256
NA Rfer_3713 Flageller protein FlgAchromosome CDS4144846 741 - 0.643725
NA Rfer_2149 protein of unknown function DUF107chromosome CDS2332889 1467 + 0.648943
NA Rfer_2045 twitching motility proteinchromosome CDS2213121 1188 - 0.59596
NA Rfer_1554 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS1676888 630 + 0.546032
NA Rfer_2063 toluene tolerancechromosome CDS2234200 636 - 0.606918
NA Rfer_3214 type II secretion system protein Echromosome CDS3561192 1788 - 0.635906
NA Rfer_2911 preprotein translocase, SecA subunitchromosome CDS3219555 2766 - 0.576283
NA Rfer_0551 flagellar motor switch protein FliGchromosome CDS576109 999 + 0.588589
NA Rfer_2903 type II secretion system proteinchromosome CDS3213157 1218 + 0.547619
NA Rfer_3675 ABC transporter relatedchromosome CDS4094696 1077 - 0.605385
NA Rfer_3137 methyl-accepting chemotaxis sensory transducerchromosome CDS3476351 1599 + 0.596623
NA Rfer_3716 flagellar hook capping proteinchromosome CDS4146672 672 + 0.625
NA Rfer_3862 DNA processing protein DprA, putativechromosome CDS4311509 1230 + 0.656911
NA Rfer_0560 flagellar biosynthetic protein FliPchromosome CDS583326 783 + 0.572158
NA Rfer_3867 preprotein translocase, YajC subunitchromosome CDS4318680 276 - 0.550725
NA Rfer_0542 type II and III secretion system proteinchromosome CDS564284 2109 + 0.633476
NA Rfer_1740 Small GTP-binding protein domainchromosome CDS1876263 1812 + 0.567881
NA Rfer_3702 MotA/TolQ/ExbB proton channelchromosome CDS4134797 813 + 0.570726
NA Rfer_1158 Biopolymer transport protein ExbD/TolRchromosome CDS1243852 420 + 0.583333
NA Rfer_3938 putative GAF sensor proteinchromosome CDS4402803 2421 - 0.591078
NA Rfer_1103 ABC transporter relatedchromosome CDS1181922 1074 + 0.636872
NA Rfer_3154 Biopolymer transport protein ExbD/TolRchromosome CDS3491290 429 + 0.617716
NA Rfer_1724 peptidase S49chromosome CDS1862420 1071 + 0.570495
NA Rfer_3188 lipid A biosynthesis acyltransferasechromosome CDS3527503 867 + 0.611303
NA Rfer_0548 glucose-methanol-choline oxidoreductasechromosome CDS572159 1620 + 0.641358
NA Rfer_0571 response regulator receiver modulated CheB methylesterasechromosome CDS592458 1122 + 0.587344
NA Rfer_1107 ABC transporter relatedchromosome CDS1187012 1074 - 0.580074
NA Rfer_3296 basic membrane lipoproteinchromosome CDS3659602 1092 - 0.624542
NA Rfer_3762 Type I secretion outer membrane protein, TolCchromosome CDS4197041 1830 - 0.597268
NA Rfer_3676 ABC transporter relatedchromosome CDS4095774 1074 - 0.606145
NA Rfer_0955 ABC transporter relatedchromosome CDS1004031 1098 - 0.603825
NA Rfer_3630 toluene tolerancechromosome CDS4046561 639 + 0.594679
NA Rfer_2507 methyl-accepting chemotaxis sensory transducerchromosome CDS2768641 1770 - 0.594915
NA Rfer_0878 histidine kinase, HAMP proteinchromosome CDS915638 1185 - 0.550211
NA Rfer_3937 methyl-accepting chemotaxis sensory transducerchromosome CDS4400908 1770 + 0.610169