Gene list
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COG category: Cell motility
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380
Number of genes found: 119
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| Pelobacter carbinolicus DSM 2380, DSM 2380 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Pcar_1355 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H; | chromosome | CDS | 1585081 | 2235 | - | 0.547204 |
| NA | Pcar_0995 | CheW protein | SubName: Full=Scaffold protein CheW associated with MCPs of class 36H; | chromosome | CDS | 1167263 | 474 | - | 0.529536 |
| NA | Pcar_2149 | type IV pilus biogenesis protein PilB | SubName: Full=Type IV pilus biogenesis ATPase PilB; | chromosome | CDS | 2501930 | 1701 | - | 0.536743 |
| NA | Pcar_1168 | probable flagellar motor switch protein (FliN) | SubName: Full=Flagellar motor switch protein FliN; | chromosome | CDS | 1363570 | 312 | - | 0.557692 |
| NA | Pcar_0811 | putative flagellin | SubName: Full=Flagellin; | chromosome | CDS | 956519 | 1476 | - | 0.48374 |
| NA | Pcar_1201 | CheD, stimulates methylation of MCP proteins | RecName: Full=Probable chemoreceptor glutamine deamidase CheD; EC=3.5.1.44; | chromosome | CDS | 1409912 | 489 | + | 0.515337 |
| NA | Pcar_0130 | type IV pilus biogenesis protein PilC, putative | SubName: Full=Type II secretion system inner membrane protein PulF; | chromosome | CDS | 163051 | 1206 | + | 0.541459 |
| NA | Pcar_2136 | type IV pilus biogenesis protein PilO | SubName: Full=Type IV pilus biogenesis protein PilO; | chromosome | CDS | 2488369 | 612 | - | 0.428105 |
| NA | Pcar_1114 | flagellin | SubName: Full=Flagellin; | chromosome | CDS | 1308958 | 843 | - | 0.591934 |
| NA | Pcar_2156 | type IV pilus assembly protein PilX | SubName: Full=Type IV pilus minor pilin PilX; | chromosome | CDS | 2514769 | 537 | - | 0.538175 |
| NA | Pcar_0876 | general secretion pathway protein G | SubName: Full=Type IV pilus major pilin PihA; | chromosome | CDS | 1032067 | 381 | + | 0.553806 |
| NA | Pcar_0030 | CheW protein | SubName: Full=Scaffold protein CheW associated with MCPs of class 44H; | chromosome | CDS | 34290 | 441 | + | 0.603175 |
| NA | Pcar_1408 | putative CheA signal transduction histidine kinases | SubName: Full=Sensor histidine kinase CheA and scaffold protein CheW associated with MCPs of class 40H; | chromosome | CDS | 1654824 | 2541 | + | 0.551751 |
| NA | Pcar_1169 | related to flagellar motor switch protein (FliM) | SubName: Full=Flagellar motor switch protein FliM; | chromosome | CDS | 1363906 | 996 | - | 0.556225 |
| NA | Pcar_1200 | CheB methylesterase | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; | chromosome | CDS | 1408854 | 1062 | + | 0.577213 |
| NA | Pcar_1189 | probable flagellum-specific ATP synthase (FliI) | SubName: Full=Flagellum-specific ATPase FliI; | chromosome | CDS | 1395741 | 1302 | - | 0.624424 |
| NA | Pcar_1172 | related to flagellar motor apparatus (MotA) | SubName: Full=Flagellar basal body stator protein MotA; | chromosome | CDS | 1366180 | 774 | - | 0.541344 |
| NA | Pcar_1191 | related to flagellar motor switch protein (FliG) | SubName: Full=Flagellar motor switch protein FliG; | chromosome | CDS | 1397754 | 1023 | - | 0.534702 |
| NA | Pcar_1683 | hypothetical protein | SubName: Full=Type II secretion system ATPase PulM, putative; | chromosome | CDS | 1963437 | 888 | - | 0.531532 |
| NA | Pcar_1206 | conserved hypothetical protein | SubName: Full=Protein phosphoaspartate phosphatase CheX associated with MCPs of class 36H; | chromosome | CDS | 1412587 | 459 | + | 0.498911 |
| NA | Pcar_0381 | Tfp pilus assembly protein ATPase PilM-like | SubName: Full=Type IV pilus biogenesis ATPase MshI1; | chromosome | CDS | 471180 | 957 | + | 0.592476 |
| NA | Pcar_2154 | fimbrial protein pilin | SubName: Full=Type IV pilus minor pilin PilE; | chromosome | CDS | 2509412 | 417 | - | 0.489209 |
| NA | Pcar_1165 | probable flagellar biosynthetic protein (FliQ) | SubName: Full=Flagellar biogenesis protein FliQ; | chromosome | CDS | 1362143 | 270 | - | 0.574074 |
| NA | Pcar_2467 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H; | chromosome | CDS | 2905045 | 2190 | + | 0.56621 |
| NA | Pcar_2143 | hypothetical protein | SubName: Full=Geopilin; | chromosome | CDS | 2494574 | 558 | - | 0.496416 |
| NA | Pcar_2135 | putative type IV pilus assembly protein PilP | SubName: Full=Type IV pilus assembly lipoprotein PilP; | chromosome | CDS | 2487836 | 534 | - | 0.477528 |
| NA | Pcar_1681 | hypothetical protein | SubName: Full=Type II secretion system protein PulO, putative; | chromosome | CDS | 1962338 | 555 | - | 0.50991 |
| NA | Pcar_1395 | conserved hypothetical protein | SubName: Full=Outer membrane channel, putative; | chromosome | CDS | 1636627 | 1269 | - | 0.574468 |
| NA | Pcar_1985 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 40H, Cache_2 domain-containing; | chromosome | CDS | 2312612 | 2148 | + | 0.529795 |
| NA | Pcar_2491 | MCP methyltransferase, CheR-type | SubName: Full=Protein glutamate methyltransferase CheR associated with MCPs of class 44H; | chromosome | CDS | 2929371 | 822 | - | 0.609489 |
| NA | Pcar_0031 | putative CheA signal transduction histidine kinases | chromosome | CDS | 34694 | 1824 | + | 0.597039 | |
| NA | Pcar_2358 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2769748 | 3309 | + | 0.560592 |
| NA | Pcar_0567 | putative chemotaxis protein CheX | SubName: Full=Protein phosphoaspartate phosphatase CheX associated with MCPs of class 40H; | chromosome | CDS | 689780 | 474 | + | 0.518987 |
| NA | Pcar_1185 | related to basal-body rod modification protein (FlgD) | SubName: Full=Flagellar hook capping protein FlgD; | chromosome | CDS | 1392201 | 657 | - | 0.578387 |
| NA | Pcar_1112 | related to flagellar hook-associated protein 2 | SubName: Full=Flagellar filament cap protein FliD; | chromosome | CDS | 1307186 | 1329 | - | 0.548533 |
| NA | Pcar_1868 | PilB-like protein | SubName: Full=Type II secretion system protein, putative; | chromosome | CDS | 2182027 | 600 | - | 0.526667 |
| NA | Pcar_0385 | putative MSHA biogenesis protein MshL | chromosome | CDS | 473890 | 1614 | + | 0.586741 | |
| NA | Pcar_2061 | hypothetical protein | SubName: Full=Repeat-containing protein; | chromosome | CDS | 2400387 | 1071 | - | 0.553688 |
| NA | Pcar_2148 | twitching motility protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 2500710 | 1125 | - | 0.541333 |
| NA | Pcar_0029 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 44H; | chromosome | CDS | 33013 | 1278 | + | 0.582942 |
| NA | Pcar_0595 | putative transmembrane protein | SubName: Full=Type II secretion system pseudopilin TklG; | chromosome | CDS | 724351 | 507 | + | 0.571992 |
| NA | Pcar_0389 | putative MSHA biogenesis protein MshG | SubName: Full=Type IV pilus inner membrane protein MshG; | chromosome | CDS | 479590 | 1227 | + | 0.620212 |
| NA | Pcar_1678 | general secretion pathway protein G | SubName: Full=Type II secretion system pseudopilin PulG; | chromosome | CDS | 1958909 | 492 | - | 0.534553 |
| NA | Pcar_0363 | conserved hypothetical protein | SubName: Full=CpxP superfamily protein; | chromosome | CDS | 451688 | 543 | + | 0.581952 |
| NA | Pcar_1164 | related to flagellar biosynthetic protein (FliR) | RecName: Full=Flagellar biosynthetic protein fliR; | chromosome | CDS | 1361367 | 777 | - | 0.57529 |
| NA | Pcar_2045 | CheW protein | SubName: Full=Response receiver scaffold protein CheV; | chromosome | CDS | 2379250 | 975 | - | 0.531282 |
| NA | Pcar_0871 | ATPases involved in pili biogenesis, PilT like | SubName: Full=Type IV pilus retraction ATPase PihM; | chromosome | CDS | 1026597 | 1137 | + | 0.620053 |
| NA | Pcar_2139 | type 4 prepilin-like proteins leader peptide processing enzyme | RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; | chromosome | CDS | 2491293 | 780 | - | 0.458974 |
| NA | Pcar_1155 | related to flagellar protein (FlgA) | SubName: Full=Flagellar basal body P-ring formation protein FlgA; | chromosome | CDS | 1352305 | 723 | - | 0.591978 |
| NA | Pcar_0872 | type IV pilus biogenesis protein PilB | SubName: Full=Type IV pilus biogenesis ATPase PihE; | chromosome | CDS | 1027741 | 1647 | + | 0.603522 |
| NA | Pcar_1149 | related to Flagellar hook-associated protein 1 (FlgK) | SubName: Full=Flagellar hook-associated protein FlgK; | chromosome | CDS | 1347220 | 1395 | - | 0.571326 |
| NA | Pcar_2303 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H; | chromosome | CDS | 2687843 | 2193 | - | 0.595531 |
| NA | Pcar_1161 | related to flagellar biosynthesis protein (FlhF) | SubName: Full=Flagellar biogenesis protein FlhF; | chromosome | CDS | 1356891 | 1260 | - | 0.6 |
| NA | Pcar_0873 | pilus assembly protein PilC | SubName: Full=Type IV pilus inner membrane protein PihG; | chromosome | CDS | 1029398 | 1212 | + | 0.592409 |
| NA | Pcar_1190 | flagellar assembly protein fliH, putative | SubName: Full=Flagellar assembly protein FliH; | chromosome | CDS | 1397042 | 726 | - | 0.57989 |
| NA | Pcar_0128 | conserved hypothetical protein | SubName: Full=Type II secretion system pseudopilin TklG; | chromosome | CDS | 157374 | 513 | - | 0.549708 |
| NA | Pcar_3077 | hypothetical protein | SubName: Full=GspIIEN domain protein; | chromosome | CDS | 3589677 | 1053 | + | 0.594492 |
| NA | Pcar_1166 | flagellar biosynthetic protein FliP | SubName: Full=Flagellar biogenesis protein FliP; | chromosome | CDS | 1362441 | 747 | - | 0.563588 |
| NA | Pcar_1192 | related to flagellar M-ring protein (FliF) | RecName: Full=Flagellar M-ring protein; | chromosome | CDS | 1398811 | 1560 | - | 0.571154 |
| NA | Pcar_1115 | flagellin | SubName: Full=Flagellin; | chromosome | CDS | 1310129 | 831 | - | 0.604091 |
| NA | Pcar_0972 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H, Cache_1 domain-containing; | chromosome | CDS | 1142142 | 2340 | + | 0.576923 |
| NA | Pcar_0052 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 40H; | chromosome | CDS | 61907 | 1551 | - | 0.613798 |
| NA | Pcar_0138 | hypothetical protein | SubName: Full=Type II secretion system pseudopilin OxpG; | chromosome | CDS | 171496 | 450 | + | 0.542222 |
| NA | Pcar_1152 | hypothetical protein | SubName: Full=Flagellar rod-binding protein FlgJ; | chromosome | CDS | 1349443 | 327 | - | 0.553517 |
| NA | Pcar_1973 | chemotaxis MotB protein, putative | chromosome | CDS | 2295686 | 975 | + | 0.557949 | |
| NA | Pcar_1113 | flagellar protein FlaG-like | chromosome | CDS | 1308532 | 375 | - | 0.546667 | |
| NA | Pcar_1167 | Flagellar biogenesis protein-like | SubName: Full=Flagellar biogenesis protein FliO; | chromosome | CDS | 1363184 | 390 | - | 0.64359 |
| NA | Pcar_0132 | hypothetical protein | SubName: Full=Type II secretion system ATPase PulM, putative; | chromosome | CDS | 165998 | 921 | + | 0.535288 |
| NA | Pcar_1199 | MCP methyltransferase, CheR-type | RecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; | chromosome | CDS | 1407965 | 876 | + | 0.510274 |
| NA | Pcar_1197 | putative CheA signal transduction histidine kinases | SubName: Full=Sensor histidine kinase CheA associated with MCPs of class 36H; | chromosome | CDS | 1404683 | 2664 | + | 0.540165 |
| NA | Pcar_1684 | type IV pilus biogenesis protein PilB, putative | SubName: Full=Type II secretion system ATPase PulE; | chromosome | CDS | 1964321 | 1734 | - | 0.509804 |
| NA | Pcar_0131 | type IV pilus biogenesis protein PilB, putative | SubName: Full=Type II secretion system ATPase PulE; | chromosome | CDS | 164265 | 1737 | + | 0.559586 |
| NA | Pcar_1153 | flagellar P-ring protein FlgI | RecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; | chromosome | CDS | 1350325 | 1104 | - | 0.610507 |
| NA | Pcar_0388 | type II secretory pathway, ATPase | SubName: Full=Type IV pilus biogenesis ATPase MshE; | chromosome | CDS | 477834 | 1785 | + | 0.605602 |
| NA | Pcar_2445 | Flagellar hook-associated protein-like | SubName: Full=Flagellar hook-associated protein FlgK; | chromosome | CDS | 2877451 | 1242 | + | 0.603865 |
| NA | Pcar_0865 | hypothetical protein | SubName: Full=Type IV pilus minor pilin PihP; | chromosome | CDS | 1018527 | 1125 | + | 0.582222 |
| NA | Pcar_2159 | putative type-4 fimbrial pilin related signal peptide protein | chromosome | CDS | 2516846 | 621 | - | 0.520129 | |
| NA | Pcar_2319 | hypothetical protein | SubName: Full=PilZ domain protein; | chromosome | CDS | 2712408 | 771 | + | 0.526589 |
| NA | Pcar_1754 | Flp pilus assembly protein TadC-like | SubName: Full=Flp pilus inner membrane protein TadC, putative; | chromosome | CDS | 2051908 | 981 | + | 0.492355 |
| NA | Pcar_1194 | probable flagellar basal body rod protein (FlgC) | SubName: Full=Flagellar basal body rod protein FlgC; | chromosome | CDS | 1400952 | 432 | - | 0.539352 |
| NA | Pcar_1372 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H; | chromosome | CDS | 1606189 | 2121 | + | 0.586044 |
| NA | Pcar_1195 | related to flagellar basal-body rod protein (FlgB) | RecName: Full=Flagellar basal body rod protein FlgB; | chromosome | CDS | 1401396 | 426 | - | 0.546948 |
| NA | Pcar_1171 | related to flagellar motor protein (MotB) | SubName: Full=Flagellar basal body stator protein MotB; | chromosome | CDS | 1365434 | 744 | - | 0.580645 |
| NA | Pcar_2157 | type IV pilus assembly protein PilW | SubName: Full=Type IV pilus minor pilin PilW; | chromosome | CDS | 2515330 | 1041 | - | 0.51489 |
| NA | Pcar_0585 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H; | chromosome | CDS | 708767 | 2121 | + | 0.571429 |
| NA | Pcar_1156 | flagellar basal-body rod protein FlgG | SubName: Full=Flagellar basal body rod protein FlgG; | chromosome | CDS | 1353040 | 786 | - | 0.568702 |
| NA | Pcar_1151 | putative anti-sigma-28 factor, FlgM | SubName: Full=Negative regulator of flagellin synthesis FlgM; | chromosome | CDS | 1348972 | 300 | - | 0.546667 |
| NA | Pcar_2057 | P pilus assembly protein porin PapC-like | SubName: Full=Sigma-fimbria biogenesis outer membrane usher protein; | chromosome | CDS | 2395056 | 2505 | - | 0.544112 |
| NA | Pcar_1111 | Flagellin-specific chaperone FliS-like | SubName: Full=Flagellin export facilitator protein FliS; | chromosome | CDS | 1306727 | 432 | - | 0.513889 |
| NA | Pcar_1148 | Flagellin and related hook-associated proteins-like | SubName: Full=Flagellar hook-filament junction protein FlgL; | chromosome | CDS | 1346082 | 891 | - | 0.57688 |
| NA | Pcar_1183 | flagellar hook protein FlgE | SubName: Full=Flagellar hook protein FlgE; | chromosome | CDS | 1390502 | 1242 | - | 0.574074 |
| NA | Pcar_0546 | CheW protein | SubName: Full=Scaffold protein CheW associated with MCPs of class 36H; | chromosome | CDS | 667760 | 516 | - | 0.5 |
| NA | Pcar_2138 | type IV pilus biogenesis protein PilM | chromosome | CDS | 2489552 | 1107 | - | 0.441734 | |
| NA | Pcar_1685 | type IV pilus biogenesis protein PilC, putative | SubName: Full=Type II secretion system inner membrane protein PulF; | chromosome | CDS | 1966073 | 1209 | - | 0.502895 |
| NA | Pcar_0545 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H, Cache_1 domain-containing; | chromosome | CDS | 665595 | 2031 | + | 0.555391 |
| NA | Pcar_2967 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H, Cache_1 domain-containing; | chromosome | CDS | 3476641 | 2088 | - | 0.548851 |
| NA | Pcar_1154 | related to flagellar L-ring protein precursor (FlgH) | RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; | chromosome | CDS | 1351608 | 696 | - | 0.593391 |
| NA | Pcar_1198 | CheW protein | SubName: Full=Scaffold protein CheW associated with MCPs of class 36H; | chromosome | CDS | 1407496 | 477 | + | 0.51782 |
| NA | Pcar_2406 | twitching motility protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 2831134 | 1167 | + | 0.567267 |
| NA | Pcar_2155 | Tfp pilus assembly protein tip-associated adhesin PilY1-like | chromosome | CDS | 2509878 | 4746 | - | 0.498314 | |
| NA | Pcar_1163 | related to flagellar biosynthetic protein (FlhB) | SubName: Full=Flagellar biogenesis protein FlhB; | chromosome | CDS | 1360302 | 1056 | - | 0.580492 |
| NA | Pcar_0505 | twitching motility protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 615098 | 1044 | - | 0.552682 |
| NA | Pcar_2364 | methyl-accepting chemotaxis sensory transducer | chromosome | CDS | 2778779 | 2109 | - | 0.564248 | |
| NA | Pcar_1170 | related to flagellar protein (FliL) | SubName: Full=Flagellar basal body-associated protein FliL; | chromosome | CDS | 1364912 | 504 | - | 0.535714 |
| NA | Pcar_2363 | CheW protein | SubName: Full=Scaffold protein CheW associated with MCPs of class 36H; | chromosome | CDS | 2777911 | 471 | - | 0.505308 |
| NA | Pcar_0863 | hypothetical protein | SubName: Full=Type IV pilus minor pilin PihD; | chromosome | CDS | 1016592 | 1188 | + | 0.587542 |
| NA | Pcar_1162 | probable flagellar biosynthesis protein (FlhA) | SubName: Full=Flagellar biogenesis protein FlhA; | chromosome | CDS | 1358140 | 2085 | - | 0.580336 |
| NA | Pcar_2607 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H, CHASE3 and Hist_Kin_Sens domain-containing; | chromosome | CDS | 3058646 | 2226 | + | 0.591644 |
| NA | Pcar_2058 | P pilus assembly protein chaperone PapD-like | SubName: Full=Sigma-fimbria biogenesis chaperone protein; | chromosome | CDS | 2397532 | 792 | - | 0.527778 |
| NA | Pcar_1193 | Flagellar hook-basal body protein-like | RecName: Full=Flagellar hook-basal body complex protein FliE; | chromosome | CDS | 1400644 | 300 | - | 0.526667 |
| NA | Pcar_0439 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H, Cache_1 domain-containing; | chromosome | CDS | 533197 | 2223 | + | 0.591093 |
| NA | Pcar_1336 | methyl-accepting chemotaxis sensory transducer | SubName: Full=Methyl-accepting chemotaxis sensory transducer, class 36H; | chromosome | CDS | 1562270 | 2223 | + | 0.525416 |
| NA | Pcar_2147 | type IV pilus biogenesis protein PilC | SubName: Full=Type IV pilus inner membrane protein PilC; | chromosome | CDS | 2499367 | 1218 | - | 0.470443 |
| NA | Pcar_1157 | related to flagellar basal-body rod protein (FlgF) | SubName: Full=Flagellar basal body rod protein FlgF; | chromosome | CDS | 1353928 | 738 | - | 0.54065 |
| NA | Pcar_0393 | hypothetical protein | SubName: Full=Type IV pilus minor pilin MshD, putative; | chromosome | CDS | 482604 | 450 | + | 0.56 |
| NA | Pcar_0868 | hypothetical protein | SubName: Full=Type IV pilus biogenesis protein PihJ; | chromosome | CDS | 1023775 | 537 | + | 0.554935 |
| NA | Pcar_2137 | type IV pilus biogenesis protein PilN | SubName: Full=Type IV pilus biogenesis protein PilN; | chromosome | CDS | 2488977 | 579 | - | 0.438687 |
| NA | Pcar_2158 | Tfp pilus assembly protein PilV-like | SubName: Full=Type IV pilus minor pilin PilV; | chromosome | CDS | 2516388 | 468 | - | 0.512821 |
| NA | Pcar_1186 | hypothetical protein | SubName: Full=Flagellar hook-length control protein FliK; | chromosome | CDS | 1392876 | 1743 | - | 0.574297 |
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