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# Thiomicrospira crunogena XCL-2, XCL-2

>Tcr_0386 OmpA/MotB
MSRRQRHEECPEEGGAWEIALADLMTTLMVFFLVMWLTSIVDPDKRKAFV
EALVGEGAGGENISADETNTPREPSIMKEDLKPVSTEEIQQAMSKVNPKD
IDIEDTPDYTKITLRSDSFFESGRATITDKTREQLEQLGETLAGRDQEIS
ITGYTDSIPIENLQFPSNWELSAARAATVARTFIYMGVDKNLVTISGKAD
NDAVAPNATAYGRSLNRRVIILVNKKSQKQRAEQPQSAKPTFDYRYQQ
>Tcr_0741 flagellar biosynthetic protein FliQ
MTPEFVLTIGQKMLEVVAMLAAPLLLPALAVGLLVGMFQAATQINEMTLS
FIPKVAIVGFVLVLAGPWMLTTLVSFSRELIENIPAFIG
>Tcr_1468 Flagellar L-ring protein
MTRINTNTQKNNNTKFSKLILGVMVSSIVLSGCSATPERMEKFSYEPNYP
MNIPKKTVPKNGSLYQSGDAITLFDDSRAHKVGDIITINLAENFDAKKKD
EAKYDKSNQQNFGLNGQAAVGSNASVFGGNVSVPGLGSGIGIGYGSDGSF
AGKSDVKQKSSLSGSIAVTVVQVISNGNLVIRGEKWITIHEGEEVIRFAG
IVRPQDIRPDNTIDSEKVADVRLIYKDTGISGDTNRPGAMTQWLHKYWPL
>Tcr_1613 CheD, stimulates methylation of MCP proteins
MQKSVDPAEGITTYKILPGEFYVTKDNERIETVLGSCISACVRDPVTGVG
GMNHFMLPVDKNATGASELSDANRYGNYAMENLVNALLNAGARRERLEFK
LFGGGRIMSSTTNIGWYNIGFAFDYIYTEGFKIVSQDIGDVYPRKILYYP
NSGRVRVRRLNAMHNQSLAAEESRYINNIGSKPVEGDVELF
>Tcr_0250 type II and III secretion system protein
MKNVKLILWFCLMGLSINGHAQPESQSEEVTLKQNFQQADIEKVIEAVAK
LTGKNFIIDPRVKGKVTLIAPEAMPPEDLYETLLAILHVHGYVAIPGKTA
IQIIPANLARDQVPYENPSAQQSDWVTEVITIEKVPATKLVAVLRPLVAR
EGHLVALSESNRMIVTDSQSNIARLKQVIKRVDVDESSGYEVIKLSHASA
EEMMLVIKKVMSKSANKQFNVSFDERSNRVILSGDQDTRREMRALIADLD
VSVPSEGRVQVIYLHYAKAAELVPVLQKIATNRSLLSSVSSDAKTSEATI
PDATGNGVQVNQLDDKTLKSRISIEAEERMNAIIISAPPGVVSVLKTVIK
QLDIRRAQVLIEAILVEVTETKQAELGVEWGAAGPNGVGLINFSGTIPTI
IGNAGNPAAQANAIGTGVNAAFGEVSADGTGWGALIRALNSDSEANILST
PTLLTLDNEEAEIVVGKEVPFQTGSYTSTGTSSTPTNPFNTIERKNVGLS
LKVTPQINEGDEVFLEINQEISDVIPKGDAVDVQTSKRQIKTRVIVGDGN
VIVLGGLLTEKETEVEKKVPGLGDIPGLGALFRSTSNEREKVNLMVFLRP
VIVRDNKMGTYYSRKKYSLIRNEQTQLLKKDSGLLEGLRPRMPTLEQWKN
MESAKSFDPSEPEETASSVEPKAVNETEKKTEQQIEEQPSTSDSMPLKEF
DDL
>Tcr_1449 Flagellar hook-associated 2-like
MANEIGSTLLNSLTNSTFDIGNMSKALATAEVAGPKAILERNVEKVTTEL
DAFKYLQTNLEAFNSYVTDLSSPTLFSQKNTSSSNETLVSVTATNSAALA
SYQIESRQLAQAHTMVANKGFTSPSDTLSTGTLTIDVGGQVSNITVDASN
NTLEGLQKVINNGDYGVTASIINNGGSYQMMFTSKESGAAGEATISGIAD
FDTNGFTTTSQAQDAVMVLNGVTVTNSTNTFDQVIDGVTFQLNSASIGTT
STVSVGQDSQSVKDTITSFVDVYNQLDTILDELGKYDTSDLTEEELASEE
YKYYGDLAGNSLLRSVKYQIRESMSGAISQLAGGSYQSLADIGINFTRDG
ALEVDSAKLDTALSTDMSALSTMFAKGGTSDDALVNVLSGSDKTQTGDYA
LNITQLADRATVTGGAVTGLTTDEQVAGDRISDLTSALTIDASASFDLNV
NGTVNTINLASVAQTYATKDEVATAIQGQIDAAFGAGVVAISYDSAQSRF
ELNAAAGQGTVDIASTTGMSNQGFGAATYAGQQLLDLGATDATFNVKIDE
STTSAVTVTAGRYTMDELALTMASTINNNADVKASGAEVSVTHDGSAFTV
TSTRFGGFSNVELTGFANFAAAGFTTDVLDAGQNVDGTLTTASGSLNIGA
YASATDGRQVKISDYAMISGNEAEVRGLEFEVIGGTTGARGTISYSEGYA
SQLETTINDLFKADTGLLSTRMSNLNDRLDRYDEKTKDIDTRYEKLLAKY
QMQFSMLQSLINSSEQTRNMLTATYNNNNNN
>Tcr_0755 CheW protein
MSADVEAIQEQIEHNEGSDDQILSFILGGEEYGVDILRVQEIKGWERTTT
IPNAPDYVKGVINLRGAVVPVVDLRIRFGLKDITYDESTVVIILRATDAS
SNTQKIIGVVVDGVSDVHAIDLGSLQASPEINGTIHTEYVKGLATVTEKM
VIVLHVDELVSSGILSEIKKSLNIDE
>Tcr_0757 MCP methyltransferase, CheR-type
MSEREFDFTEQDFTRVKTLVYDFAGIDLNDSKKNLVYNRLAKRIRFLELN
SFKQYLSFVEEQGESEFVHLINAITTNLTFFFREDHHFEYLAHTVIPSIL
ERNKSSKKIRIWSAGCSTGEEPYSLAIVLKETVPAGWDARVLATDLDTNV
VETGRTGVYKMDRLKGVSDARKKRWFLKGSGSMEGNVRVKPELQQIIDFG
QINLMNEWPIKEAIDVIFCRNVVIYFDKETQARLFDRYANLLPDNGHLFI
GHSESLYKVCDRFELLGQTIYKKIK
>Tcr_1442 flagellar M-ring protein FliF
MPDQPSLDPTLSSSKAAEGSPLLKNLTSLSVAKQVSLVIALAASVALAIG
IILWSQSASYTLLFGSMDAKDMNEVIQTLDQENVPYKIEQNSGAILVPNE
QVHSLRLKLAAQGYPKQAPTGYQILDIDQGFGISQFKETTRYQRALEGEL
AKSVSSINAVKSARVMLGMPKRSVFVRKQQEPTASVTVKLYPGRALNEEQ
VSAIVYLVSSSIPNMKPKGVTVVDQQGNLLTSDSHSGIMNVSLKQLGYTR
QVEDTLSQRIIRLLTPVAGGDHKVRAQVTAELDFTQQEQTRENYEPDPEA
IRSEQEIKEINRNEGPMGIPGALTNQPPRAGIAPEEGYKPENDPNLKNSK
EKKTKNYELDRTVSHIKNSVGSIRRLSVAVVLDDKLTVDDNGDTVRTPLT
EDELQRYRRLVSDAVGLDEARGDTLSIVNASFIQEKQEDFAGPEIWEEPW
FWTLVKQILAGLAVLIIIFGVIRPMLKDLSKREEVAMDYPEDVPEEEEEL
ENADEISRALEQMNEEVEQKAEEVDEDSEKDKEMLEKVKAVVSADPKLAA
HIIKQWMSKGD
>Tcr_0759 methyl-accepting chemotaxis sensory transducer
MLQIMKQYWGAWLVTIVGIGLTFVEIPFIGAIVAVLVSLTWTLTVARIAR
LGGQPQQAATPSVSARANDFDAEVIDDALQVIMNDIDAVVDQEVEVVRGE
LLQVKELVAEAIETLSNSFSGLHSQTQAEYQLVVSLLDNLGGSGEGMSIQ
KFSSEIKEVLGYLISLLKSSSQRSNETVGKIDDMVEQIESIFILLEDVKG
IADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLSLNSNLLNEQIRKQ
AEKAKQTVDHVRQLVSDTAAKDMQEANTSQEQVTVLVTDLEDMNSGISDK
LGDVSGIISEIEVSVSNAMRSLQFEDIVRQLVEQVLNHLENLSGFSHKIN
HFIEESKNDPVKSVAEHKARLESFRNTIHQEREEIESKRMRRVSSDSMEE
GEIDLF
>Tcr_0751 CheW protein
MDSESNMQSTNNLLDGVITDEDDEKYVGPSIRCVMFNLDSEVYGINVKKI
REVLRVGTIRKVEGSAPSVLGVINVRGVIVTVVDTRITYGLPTKPVDDLS
RIIIVELDTDNIVGMMVDCVMEVKDIPESQFEPMSATKEGASRYLQGIAH
YNGDVIVLIDVDSMFSGQT
>Tcr_1611 hypothetical protein
MPFALGAKEVQETIMVLNLSVAQIELSISEGDNSVNTLIDSFTYMSEHIE
AIELSSQKIAEMSNDVVGIAEHNQSLLVQTNDLAQKMQQAIIAFQFYDKL
SQRLNHVSHGLSGLAEIVSHEMHAKDEAQWKAFKSEVRKGTTMREEEELF
ELIFDEKKPAEEAIEIMKTRMRDRMNAAEEVEEEIEFF
>Tcr_1391 Prepilin peptidase
MFELTQVEAVFAASLLGLIIGSFISMLTWRLPRMLYLDASAKAHSLTLTR
SKCPLCKTPLSWYQLIPVFSWFLSKGKCLTCQNPISIRYPLIELSSMLIT
GSLVWYFGQTYSALVAIGFSWVLLTILIIDIEHQLILDSLSLPLMWAGLL
INSQSYYVSPEQAILGAAIGYLLLWTLFHSFKLLTGKEGMGYGDFKLLAA
LGAWFGVMAIPQMILIASLSSLVIGGGLALLKIKKLDDPIPFGPFLAIGG
WSSLLLGNQLI
>Tcr_1465 Protein of unknown function DUF1078
MADMLNIGTAATNTFRRAIEVTSHNVANVGTEGYSRQRADITSSSASNAG
YGFLGAGSRVSSIDRVYADYIQTQLVDAYSLKSRYDEQLSLSKQVEGIVA
SNDKGVQTFMQSLFDSFQDLSNNPTSSTSRDQVVSQAKNMETMLLNMSTV
LGDTQEQVNGQIKNMTDEINKNLTTIQAINNQVANSISNGGQPPNDLLDQ
REQAIKELGQYMDIKTFRQEDGRIDIHTGNGRYPLISDNTITKLDADLTD
YKNENRVEVYMQLGGQKVQVSDNIKGGQLGGVLDFRNNMLDRSMNELGLA
LNGLVASTNWQHYQGYDQNGNPGQDFFKPLSTNAIQSAKNTGPEDGTNIQ
VSFNPVYDPSAPVQGTNPPYDPAAVPPADNAQPPTYGDKQNYLNQAMSAI
GEFEPREYKLQFSTASNGFEIKDNKTGDPILDAAGNPVLITLGAPDNGFE
DVEGLRFDVTNVAAAPADGDTFVVKPHQAMLEDFATTISSGEQIAARGQS
PVDTGVAGLADEAPSPASVGDNVNIANMASLQSKKVLYSDATGNASETLL
GGFSKMATNVGMYVHGTEIQLTSQENVFDQINARRESYSGVNLDEEAANL
LRFQQAYQASAQIIQTSQSLFQSLLGAVRL
>Tcr_0360 OmpA/MotB
MSALALKARSSWLFSFGDLVTLLITFFIMMIVLNKGEISQVQKWAESQLD
TAYAQLTTQMADAEYVSLSRTANGISVNISHPEAFVKGGYNLSSALESEL
TQLGKALQSLKIFHLERSDVPIHILRIADADSLSWRSEVSVAGYTDDDQI
DPQSPLRNNWFLSTMRAQNVMKSLYQSSELKQSQFGVTGYGKYRPVASNE
TREGKAKNRRVQVMISATFEKSATQPAWFK
>Tcr_1441 flagellar motor switch protein FliG
MASSEIEEMGDDTLTGLEKTSILLLALGKETASKVLGHLNPREVQQIGTA
MTGVTDVSHSDIHVVMKKFLDELGEDALGINPTEYAQSLMVDALGEGGGG
LMDAAMLGDQVKGLEALKWMHPSTISNMLRNEHPQVVAIVLSYFEPDLSA
EILAGIPERFQSEVIYRIATLTTIQPRALFDLNDVLEHASSDGEGGKLAT
IGGEKRAAEILNLVGGGVDSRVLDDIAVEHEDISKAIQDKMFVFEDISGI
EARGIQTLLGEVPTDVLKIALKGADDTMTELFLANMSKRQAEMLREELEM
SGPVKLSDVEEAQRTIIQTVRRLADEEKLMMPGGAEEFV
>Tcr_0749 Chemotaxis phosphatase, CheZ
MKNIKIKQIKALLKAMEKEDYDKASQALDEIIATRDDNLLEQVEQIAQNL
HDTLEQFGADSMLLQHTKHGLPDATERLEYVIETTEEASNKTLSAAENAI
ALLETLESHVTDDSQKELIGKAQSEVTEIMMAQSFQDLTGQVLNRVIMLV
TSLEQSLMELINKSGIHIDDIPDPSDSEEERKAQEMKGIGPNVTKSSQQN
AVNSQDEVDDLLGDLGI
>Tcr_0728 CheW protein
MSEQNKEFLTFKLRKEEFAIAIDRVQEIRGWQEPNPLPNVPSFVKGVIDI
RGTIVPILDLRERFKMAAEFSATTVVIVVNIATSQGERIVGLVVDAVSDV
HQFDMNALQSPPDISNSIDSQYIQGLTTIKDPEAADKDKEDTKEIGMSKS
SKGRMVIVIDIDKLASEGLIEQVANADESIPLQNG
>Tcr_1472 Flagellar hook capping protein
MATPAISSNNTDYMKALQQSTNGKSNAPDQQLGQADFLRLLTTQLQNQDP
NKPMDPTNFVTDLTQMSQLEATTKMNQSMLAMTTGLQNMQVMQSASLIGK
NVQAIGDTMSHEAGTETPIRLSLDQPLKDVTVVVSDGSGPVSEIFVDDLN
AGEKMVNWDGKDKLGNVAGSGEYTLTVFGLDKEGELQSIKTIVPSKVNSI
SINDDGTTTATLATGEKVKIDDIREIS
>Tcr_0740 flagellar biosynthetic protein FliP
MKKYFRSLFGIALLLFPIMAFSEPGIPAFTVETDAAGNQDYTLTIQILLL
MTGLTLLPAALIAMTSFLRIVVVLALLRQALGTMQTPSNQVLIGLALFLT
LFIMSPVLDKIYDTAVSPYLEEQIKFKEAIDVAKTPIHQFMIQQTRADDL
GMFAEMADIQLTDPESVPFKVLIPAYMTSELKTAFQIGFMIFIPFLIIDL
VVATLLMSMGMMMLSPMIISLPFKIMLFVLIDGWALIMGTLANSFVVSGG
SI
>Tcr_1432 flagellar motor switch protein FliM
MDDILSQDEVDALLKGMGGGDVDTEGDNPAEGTSAKVYDFTNQERIVRGR
LPALDIINERFARGFQRHFNEMIMSSVEVTAGEVKIIKMIDYLRNLFVPT
SLNIYRINPLNGVSLFTLDSKLIFTAVDMYFGGTGLLPFKIEGREYTPVE
MSMVRSILDMSSDNLRKAWAPVMDIEIDYMHSEMNPKFASIVDATDMIVV
SPINVRFEGVEGRVDIVMPYAMLEPVRDKLEEGMSNLQGESDNRWSRTLK
EETKNIEIELAVNLLELQMSMDDLMKMEKGDIIPIEMPELVTVKAEGIGV
LKGKVGESRDRKAVKIEQILRHPAYQERMVENVKEWYDE
>Tcr_1433 Flagellar basal body-associated protein FliL
MAEEVQEEKKSSGGGKGMIIALLVIIVLLIVGVAVMTFVLLSGNGDNQTA
HAEETTQHAPAEHSDEPVVSSDGVVQQYSPKFKQYEPPEPGSPPQYFAME
PFVVNFKGEGQAKFLAVTLKFMSHYPQLITEMESYRPILRNDITSLLRVQ
TYSVMNKDDGPDILREKILTKARAVLEKRNIYPDLLENVYFERFVMQ
>Tcr_1934 hypothetical protein
MKLKRSSLAAPILVTLMTITTMPLATAANNDASFDQVQKESRELMQSLKS
YSAKQKEEAVQATQKALDKIDARIDRLEENVRTNWNEMDKATQQQTQESL
KALRKQRNKVSEWYGSLKNSSAESWDQMKKGFSEAYQSVNQAWKKSVEAF
QSED
>Tcr_1473 flagellar basal-body rod protein FlgC
MSMFPTLDISATGMHAQTVRLNTIASNMANVDSISSNSDETYRSKQPVFK
TIMDNETGRPAGGVMVDDIVESKAPLKMEYNPNHPMANAEGYIYRPNVNV
VEEMANMMSASRSYETNIEVLNTSKQLLLRTIQMGK
>Tcr_1431 Type III secretion system outer membrane O protein
MSEEDDLSAWGDALDEQAEAEGSDAAGDDPWGAALSEQAAETSSNNSDEI
DAASFDALEKGRGDSSEKVDLDVLLDIPVTLQLEIGRAKVSIRNLLSYTQ
GSVIEMDRLAGEPLDLLVNGTLIAHGEVVVINDKFGVRLTDVVSPQERIK
KLK
>Tcr_1474 flagellar basal-body rod protein FlgB
MESVFGIHEHALAVRKERQSILANNIANADTPNFKARDVDWRKEMQAAEE
DLSKGHYKPDLKMTNSRHIEGFAEASTEDYLKYRMPTQPALDGNTVETHI
EKAQFMENSMQYQATLEFLNGKITGIRGALRGE
>Tcr_1451 Flagellar protein FlaG protein
MDIQNHLPPDVALKMQPELSQVATNPKSPQQASSPTTAALTRDADEITFN
HVQTQAKSLNEKMLLLGLSIAFSVDEQTQSSVVTVLDTKTNEVVKQLPSE
GSLKMMKHIQDYLDNLQRNEFQEKESLTGILFNEII
>Tcr_1470 conserved hypothetical protein
MNRMLYVSMSGAKEVMLSQANNANNLANANTDGFKQDFNQFRAQHVQGPG
WNSRTYSLDERPATDFAPGAVKVTGRDLDIMTKENGFLAIQAPDGSEALT
RSASMHLNPEGDLLDVHGNPVLNEGGAPINIPPAKSIQIGSDGTISFIPA
DSTNNLAVVLDQVRLVQPDIKQLEKGLDGYIRNNGAELEQAPIRVVSGAL
ESSNVNTVEALTNMIELSRKYEMQIKMMSTSKNHAQKSDSILKLT
>Tcr_1438 Flagellar FliJ and related
MANSKVKRFEMLVELAQDELDKAQETFIAVRQQLESSQEQLDSLQDYHTN
HLSKIHNEKEVTTAQLQTTQAFIDNVNKAILSQKDQITQLTHVLEKAQET
WIEKRARHQSLKNIHLKLKRDERVKLDKQEQKMLDELASQQFFYSKSSE
>Tcr_0642 type II secretion system protein
MRNYRYRGISQTGKRVQGEMQASNEQDLEQRLRAINIDLLTFKTKTSRGS
GWLKRRKVTRRDVIVITSQLRQLLKAGVPLMDILDDLRRTYENEAVCEIL
SSIYKSMEGGESFSLALKNYEAVFGKVYVSLVAVGEKTGQLDQVLENLEN
TMKWEESLASKAKKVMIYPAIVATVVLAVVVLLMVFVVPELLSFINEMDG
SLGFATVSLIATSHFIREYIVFIGLLLISAFYLLKWWLKKSHAFRVKFDH
FIFKIYVFGPILLKLKIARFASTLSIMYGAGINFNDSLKLAAMVTGNAYL
EERISESRHLIEEGETIYKAFDLSGLLPPLAVRMVKVGEQSGNMDEALHN
VSEYYDTEAKDLIEKIEPAIEPILTVVMALMVGWVMMAVLGPVYETISKV
P
>Tcr_0045 hypothetical protein
MNRLKLISALCLLGATSAQAAPSSSGPIGPNIGYGDASNANTIYDPLANP
ANNALNAADTEGYRVGLGINAQTRIEIENLEGASDYYDTKIDPLLNDITN
APQLETNLEAFIATYDKGNISTISGVTVPLVIKTDSMAGGLSLDYTRQVG
AAGVIIKGTGNVTPAADGTNLTINRGSAALGVTYKQLDEFALGYGFKALT
SGNSALTIGVTARYLTLLSNQNNVDLKQFIDDNVSGSTNFSDYVDGMDTG
STDSNLTADIGINWMADNYMIGLTGMNLTEPTFKVNNMTSTQNKYDYFSY
LVPAEYKMKAQYRVSAQVYSENREWTLAGSYDLAESNDLNNNDTQWWSVG
ASYATNSAWYIPDVRFGLRGNLIGTEKTYTNVGLTLGFLNLDVATTTMDF
SGVEDKQKDAGIMASLGVEFDF
>Tcr_0641 type II secretion system protein E
MKGEDRLGEHLVQEGLISQDQLRIALMEQKITGKKLGEILITLDFLTEEV
SRKVVGSAVGYSTMSLKGVVPDLNALRLISESFARANLVMPISFDGELLK
VGMTSPDDILLLDKIKRHIKQDVRLEPVLVVENEIQYSIDHFYGYELSID
GILRELETGQADDYVLSEQHEYSQPMVRLVDSILTDAVKRGASDVHFEPE
EYYIRIRYRIDGVLQVVRLLHKSFWSGLVVRLKVMSDLDLTDQRMPQDGR
MELVVNGRQIDFRVSSFPTSHGENFVLRILDREKGIMPLDALGLDVDSYR
ELKLMMSRPTGIVLVTGPTGSGKTTTLYSLLNEINQEGVNIMTLEDPVEY
PMKMIRQTAVNEEIGMTFATGIRSLMRQDPDIVLIGEIRDSETAEMALRA
AMTGHQVFTTLHTNSAIGAIPRLLDIGMSRSILAGNVIGILAQRLARRLC
PHCKEPYEPDGFEKRIVGFSENQSATLYRAAGCPICNGIGYKGRLAVLEI
LRFSSEMDDLLLEGASQHDILDQAVEQGFTDLLQNALRWVRSGDTTLDEI
SRIVDLTELV
>Tcr_1464 Flagellin-like
MRVSSNQFHMQSFSAIEKHQNSVLDIQEKLTTGNRVNRPSDDPIATSQIH
SLNKAVNTISQFEKNGEFAKSQLSLEESQISTAVDLTQRARELSIQMMNG
TYTAEDRQATAQEIGQIIKHLTGIMNSNNSEEELLFAGNNVDAAAAFVVD
PANSGALQPGNEYYAYIGSANAGAQFDNRANFGSRFVQIGFDNDQTAAPD
DKGDSSRVRITDNGAKVFNIPGGATSLPAGVDPNLLNVLVGLKDSLDQGN
PPPDAVADDLLSAVKGLSKQQAEIGSRQNRIQTQFEAGQTFSMALQERRV
NIEEMDVVEGISQLNMRQNALQMAQQVFSKVQGMSLFDYLR
>Tcr_2133 flagellar protein FliS
MTTNQTMTSDVKAPILQEYNRNPDTESKLADNPSKTILLLLQGVVDKGNL
AKVCHQSNALVEKGFHLGRMTTILDALRDRLSMSENTPLAYDLDELYRYA
DKSIQEAVFEKDCFYLDSAIEILTEVRDAWLEMMHQTGQLADNG
>Tcr_1477 Flageller protein FlgA
MRPIKPYIQHFSAALFLLSALLLNSTCVQAENPSLNPESQPLDTLYNMVR
SHLKQKTDQKVYNAQIDIREFSRRLQLPKCQEALTLEDKAPEKLYGRMTL
RLVCPSPEWKVYVTALVEGDVPVVVTTKAILKQAVIHKEDVKQILVPYQK
SKTGALIDVDSAIGMRAKRGLSPNSILTVRQLQPPYLVLEDNNVTIITYI
GNIKVKSLGKALEDGVKNQQVPVENLSSKKIIKGIVIAPNTVLVP
>Tcr_1436 methyl-accepting chemotaxis sensory transducer
MRLHQRLVMMGTSLLSTAAFSQSEVMGAPIAGVALIAILVGAVVAGALVY
LVWCNKPGVCDQTNLIEAVDKIASSDSSFLPLSDEGVDPKLQASVNQLLS
KANEIISSKQGEIEAAHSQVAVLESQIEELNETLSNAYAQAEVTSSQSDV
DASELVSLSEHVSTVVDQMSTGTNAGMASASSVISEVSGLTDEVTHASTV
IKELEEDSNNIGTVLVLIRDIAEQTNLLALNAAIEAARAGEHGRGFAVVA
DEVRILAGKTQQATTEIQKIIEELQQRARNAVEVMGSGQERVEATQMQAG
KVNDFLHEIEDNLSQLKIAQEALSKAVNSF
>Tcr_1439 ATPase FliI/YscN
MIKQLFNQYLHYKFSELSEQIPQKSNLQIEGRLVRMVGMTLEVVGTYAPI
GSRCQVLSKNEPPIEAEVVGFNDDRLYLMPIGKIHGLEPNARVIPVSGGI
KVGVSSSMLGRIIDGAGNPLDDKGPISFDKRVSLNGDKINPLHRAPIKEP
LDVGIKTINGLLTLGKGQRVGLLAGTGVGKSVLLGMMTRFTDAEVVVVGL
VGERGREVNDFVRNNLGEEGLKRSVVVATPADDPPLMRLHGAMLATSVAE
YFRDQGKNVLLLMDSLTRFAQAQREIALAVGEPPASKGYPPSVFAKLPQL
VERAGNGASHSGSITAIYTVLAEGDDQNDPVVDSARGVLDGHILLSRQIA
DSGRYPAIDIEASISRVMIDVVPQQQNKLARRFKQLYSTYQQNQDLISIG
AYRKGTDAAIDEAIEKHPQLSHFLSQSIDESFSVKESLSALESVLS
>Tcr_0251 type II secretion system protein E
MNALPFPFANKNGVVLGMHPDIGRVLYCLEQTSPTVLMEVQRVFGSEDLV
VRPLSESAFEKQLQAQYASQSSNSIEAMDELDIPDLDQAMAEVATAEDLL
NSNDDAPIIKLLNAILAEAIRKNASDIHIEPFETQLRVRFRIDGQLKVVL
TPKIQFASMLVSRIKVMAKLDIAEKRLPQDGRIAIKLGGRAVDLRISTIP
SSFGERVVMRLLDKSAGRLDLTDLGLPDEQLLRLKKLLQKPHGILLVTGP
TGSGKTTTLYAGLSRLNDNQRNIMTVEDPIEYNIEGINQTQVNTKAEMTF
AKGLRAILRQDPDVVMIGEIRDYETAEIAVQASLTGHLVLSTLHTNTAVG
AISRLKDMGVEPFLLSSSLLGVMAQRLVRQICPECGEKKPADDAECQILG
VASAEIMHPVGCEACSYTGYQGRIGIYELLEIDNTVRQMIHSGESDQAIE
TYVHQTTPSIYQSAMQLVLNRQTSLEEVMRVVQR
>Tcr_1933 uncharacterized conserved coiled coil protein
MSTSNKQVYQQKLQAQLDEWSADIDKLKAKARQADADAQIDYNQEIETLK
EYQAQANAKLSELKSASDDAWQDLKSGTEEAWKSLQTAIKSAADRF
>Tcr_1443 flagellar hook-basal body complex protein (FliE)
MSNSVDTQSLMLQMRSLAAEAASQSQSVQKVEKGAQSAENFSDLLSQSVN
AVATEQNKSSAMKTAFEKGEDVDLTEVMVQAQKASLSFQAMTQVRNKLVE
AYKDIKNMPI
>Tcr_0359 OmpA/MotB
MRAETILQAEDQKATQRIKRSQSWQMVYIALFTSLLAFFVLITTLIELEG
SQPKRDYQKLVNFLYLDALETQQRLGMNWLHIENTLSKGIKITMQEEVFS
SQDLFASGRAKINPRYLPYINRFVGFLNQLKLETFQQRHPLQVKSITRPG
ESFQVTVRIEGHTDATPLAKTALYQSNFELSTFRAYAIMNVLQIYSGLPE
SLFSIAGYGSFHPVTRNPYDSKNRRVEIYLIPQVIQNEVTS
>Tcr_0742 flagellar biosynthetic protein FliR
MGLYFWPFIRISGMLLMVPILSGSYVPMNVRLLLAVFITFAVAPSLALPP
PVDPFTWHGILLIVQQLGIGVAIGLIFALIFQAFVIAGHLASMSMGLAMA
SMVDPATGVNTPIIGRYFTIIATLLFLLMNGHVLVFKAVLQSFETLPIGL
HFFTQDSLKLIYGFGSQMFESGVTIALPLVTALLLVNIAFGVVARAAPAL
NIFAVGFPVTLLVGLIMLVFITPLLYPNLQILMKATVELLAQLKLNS
>Tcr_1434 OmpA/MotB
MSEEQSIIIKRLTKCPHCAHGGAWKVAFADFMTAAMAFFLMLWILSGVND
EEMKAMAEYFRDPTVIEASPQVLVPSKEAGQSSDSMIDMGGFKDTPKGSI
ENEDGEAKAQEKAQMEDLKRQIEQKISENPITNELKNQLKIEVTPNGLQV
QVLDDRKRPMFGSGVDLPKDYAAKLLKEVGSVLAQTNNRISIAGHTDSSG
YHSNAEYTNWELSADRANAARRLLLDGGVGEKKIAQVVGLSDTVPFDKEN
PYNPRNRRISIIVLNKEADERLKSLSEAPGMEDLSKELINSPLDQN
>Tcr_0777 methyl-accepting chemotaxis sensory transducer
MKFFLNLGIKIKLILLVTVSILGMSFITINDSLKERNTMLNAKKDRIESI
INGVFMQIDHIQQAVKAGHLTKDEAQSQAKQIVATFRYDNGNYLWINDFQ
PKMVMHPLNPKLDGKDLSDYQDKKGNLLFVDMAQTAKKSGQGYVEYFWMK
PDNPNPVPKMSFVKAIPEWKWVIGTGIYIDDVNEEFISSLIENLLILLLI
VLISVAFAYLVFVSINRPLQKMTEIMNKVSNEGDLSEKIEIDQTDELGKI
AHDFNHHITFLASTISEIQRVMSQVEQGKTEVKIETEMQGIFNHLKQSIN
QSIGNINQTIVILGDSIEALSKGQFNKQTNSNLQGHFGDVIHHTETVIHT
LKVSFDEINKIMEEMSVGKFDRRINIDVSGEFKKLEDNINKSLDSVEHAI
LHIADALNRQASGDYHTKTQANLAGDLEILENNLNATCDQIGSTILQVND
SATNVFNMSQQLSEDAQHFSEKTQSQAATLEETSASTEEITSTVKQNTDY
ARDANNLATIAQEKAEKGSEITQNAVVAMQHITEASHQISEITSLIDSIA
FQTNLLALNAAVEAARAGDHGRGFAVVAGEVRNLAQKSSDAARDIRNLIN
DSVEKIEEGAAYVNQSKSSLSEINEGIQEVSKIIYEILSSSEEQAKSIEH
INQAIMSLDKDTQQNAHLIEQTAQNAQNMQHAAQHMLQQMDFFKSDNEKA
GKMLLNNKNNPV
>Tcr_1453 Flagellin-like
MAMVINTNMAAINANRILSNTTIDQQTAMERLTSGKRINGAADDAAGLAI
TTKMTTQVMGTDMAIRNANDGIAKIQTADGASEEITNMLQRMRELGVQAL
NGTYSTGNRTQMQEEFSALQEEIDRIAQTTKFNGVNLLNSAAVGASTAKV
FHVGWESGVNNKISMSVLNVGTSALSAGGVTLGSLTLTSTATGTTAASAA
VSKLDVVMSKMNLQRASWGALQNRLESTVSNLSNVNENIQGARSRIEDAD
FAKESANLARTQVLQQAGMSMLSQANQQSQNVMQLLQ
>Tcr_1246 hypothetical protein
MQVSNSAAAYAYQGMQDGFNRLADNSQQLANPNNTDKTEALVDLKQNETQ
VQASAKSFKSYDDMIGTLIDIMA
>Tcr_1471 conserved hypothetical protein
MGVAYDLTAVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFSDMFYGAQ
STPGNGVRVDSITQDFTNGTITDTGRDLDMAIDGDGFFILEDRTGKYENV
YTRNGSFKLDKDGYVTSQEGNKVQGYLLNPALSTERNPVFETTLSSIDLD
ELNKTPKSTDEMNYDINVDGEENNNVDATQTPIAGIENSVGGDTALAGSA
LSNIEKLVAPETEVYGGYPDFSTNKIVYDTLGGEHRLTTNFYKRDVVTEA
NSDLTYDPLTDTYTQGAAGTGNTKYTSWLAQYTMEDYDDATGQWVTSGHR
EAVPADGTASADAGIIYELRFDTNGNLIDTREPTVAALATGANSTPTGQD
TANNPLDPATWTPTGNQPNMEWVVDSPITGANDPLGNPADALGVSIDVDF
TKMTQFAGSYNLRGVTQNGYAIGDLVGVYTGKDGVIEARYSNGRSVPVAQ
LGMANFNDKNALEKLGGQSYAESFASGAVQIGTSERNGYGSINAGALEYS
NVDTAGELVHMIQTQRTYQASAQVIQTSQTLTQTILQL
>Tcr_1586 MotA/TolQ/ExbB proton channel
MHISFTALMGYILGLGLFVLAVYLNTDNYLMFFSLSSLLMVLGGTIAVAM
ISFEGINVLLAMKAIFATLATAKVNTRKLYNDVGVLIDWAIIVRKEGLRK
FENTVVLSKDEDQNFLGQSFLYLLSGYKGQKLMTLLEHTRQSMYDRQMMQ
AKVLMTMASAAPAFGMIGTLVGLVIMLNSMEGDPSKIGGGLAVALLTTLY
GVLMAQLIFKPAARKIEQKQDLEAYRNHILTEGILLMAEGGSPTHIQDAM
NAFLDPRYQFKRA
>Tcr_1524 MotA/TolQ/ExbB proton channel
MSFSTFIGLFLGISIVITAMAMGSSILIFVNIPGLMIVLGGTIAATMIRY
SFKETLHAIGMSFQIVLPSNDIKDKNELVDLTEDLLRLSRKDGFLVLDKQ
EVNHGFYRHGVRMLVDGYSKEVIKQSLMEENKLFVERATTSAGVFSSIGG
AAPAFGMIGTLVGLIQMLSNLSDPSSIGPAMAVAMLTTLYGAMIANLFAL
PMADKINIWVQEESVRQFMIIEGLMAISEGRNPGMMRELLSPYLENKPSA
EEVVA
>Tcr_0744 flagellar biosynthesis protein FlhA
MDFNQILNQIKTSFKNGLGIPIAILALLAMVVVPLPPFLLDVFFTFNIAL
SLVVLMVTLYAKRPLDFAVFPTIILLATLFRLALNIASTRVILLEGHNGP
SAAGNVIEAFGEFVIGGNFAVGLVVFAILVVINFVVITKGAGRVAEVSAR
FTLDSMPGKQMAIDADLNAGLITQEEAQARRIEVTSEADFYGSMDGASKF
VRGDAVAGIVILFINLIGGFAIGMGQHDMTFSDAIEVYTLLTLGDGLVAQ
IPSLLLSTATAIIVTRVSGDKEDMTQQVQTQMFANPKALGMTAGIVAVFG
VIPGMPNLAFLSFAAIAGGGAYLIYKKQQETPLPEAVSTEESEAEETSAP
ELSWDDVQAVDVLGLEVGYRLIPMVDQAQNGQLLERVKGVRRKVSQELGF
LVPPVHIRDNLDLKPNQYKIMLMGVASGEGEVFSDKELAINPGQVFGEIA
GTPTKDPTFGLDAVWIDASDREQAQALGYTVVDSSTVVATHISQIIQDYA
SELLGHDEAQKLLDKLKQNSPKLVDELVPDRMSLAVVVKVLQNLLMEKVS
IRDLRTILETLTERASSTQDPMELTMHVRAALGRSIVQGIVGSSDELKVI
TLEPGLEQLLLQASQGAPEGQLAIEPGLAERLHTTLKEEAQKVEMTGQSA
VLLVAPQIRAQLARLFRFSLANLHILAYSEVPENRRISVVANVGQGG
>Tcr_1750 twitching motility protein
MDITQLLEFSVQHKASDLHLSAGTAPMLRSDGDIRRIDLPELDAKTIQEM
LYEIMSKPQQEQLETALEIDFSYELPHIARFRVNIFQQNRGLSAVFRTIP
NQVMTLEELNAPEILKEIAQTPRGIVLVTGPTGSGKSTTLAAMIDFINET
QQAHILTIEDPIEFIHQPKNALINQREVHRDTHHFSSALRSALREDPDVI
LVGEMRDLETISLALTAAETGHLVFATLHTSSAAKSIDRIIDAFPAGEKN
MVRSMLSESLKAVISQTLLKKQNGGRVAAHEILLGSPAIRNLIREDKVPQ
MYSVIQTSNKLGMQTLDQDLQRLVKNGTVSKEVARSKAVSKADFL
>Tcr_1479 FlgN
MNQVTETQDIPQRLSQLLEHLNAFESILDQEADILKASDISPLITILEQK
ETLSETLTQEFNILSKSLSPDENVQLSLQELLLVDSVKHLSVKTQQHLQE
AVDSAIQCHEKNVINGMTVQALKNMNQTLLNVFTGQDQNAQTYSATGKTA
TSETKSNPLGKA
>Tcr_1440 Flagellar assembly protein FliH
MASNQESLDPMPPVPEEENLPVASLMRADEVDEPEIKAFQYLDLEQEEVK
KEQKIRADVKEQIRKELQPELVRKAGLLKKEVYEKSHKEGYESGYQEGLE
KGRKEAYEAAEKEADGTLSAQVKSVQKLLESMSQPYQDISQNVFESLCHL
SVDLAARIVPVEVALHKEWIIDAIQEAVQKLPDDSDPIDVFLHPSDLEIV
EKYLQSNKTNWRLIADDDLLEGTCRIKQNFSVVKNDWKSRLDELLGDTES
LFKKIAKQPNKVLNSNSQASTPSEEN
>Tcr_1476 response regulator receiver (CheY-like) modulated CheW protein
MSSFLKGVDQRTSLAGMNRMELLLFKIHGNQLFGINVFKVREVIRTPSIS
PVPKSDDRVVGVADIRGQTMPMIDLAKSLDLPAVPKDKYGDSLTIVTEFN
SSVQGFLVEDVDRIVHLRWEDILPPPDSLQNVNYLTGITRAQEQIVEIVD
VEKVLAEVSGIQEEMSDEFLHQNQAKTKGHDFFVLGADDSAVARNQLKTT
LEKLGISNKIVTNGRMALDFLKKWADDADKDISRPVGERVLMVISDIEMP
EMDGYTLTTNIRKDPRLSDLYVVLSSSLSGGFNDTLTEKVGANKFMSKWH
PEELAQAIIDRIDAVATQRQKQAS
>Tcr_1612 CheA signal transduction histidine kinases
MDMMETFRQTYLEESFEGLDVMEAGLLDLSPGTPDNEKINEIFRAAHSIK
GGSGTFGFTEIIDFTHVLETLLDEMRDGRRDVTQEATDTMLQAVDVLRDM
MTRLQNHEEIDEVRASEVQKDMEAILNGGSVDSEPSASEMHSTEENQPTS
STASGSWVIDIVPEKELLQTGNEPIRIFRELETLGEISVSADDSALPDVA
ELNPEDLHLKWQVTLTGEGIDEEDVKEVFEWIDGDGAEVTITAPSTTASD
SSTANAEPAPEPVVAETPAATPPKADVKKPAAAAKPAQAASAPKQDSSIR
VDLSKIDQLVNLVGELVITQSMLSQFGEQAEQNEDSDWADKLKEGLTHLE
RHTRDLQESVMNIRMLPVSFAFNRMPRIVHDVSKKLGKSINLVMEGENTE
LDKTMLEALTDPLVHIVRNSIDHGVESPEVRLEAGKPETGTVKMAAFHQG
GNILIQITDDGAGINADKVRQKAIEKGVIEEDHKMSEEEIIDLIFHPGFS
TADVISDVSGRGVGMDVVRRNIRGLGGSVEVKTEKGHGSVFTIRLPLTLA
ILDGQLAKVGSETYVFPLVSIVESIQVDKSLVKGIAGQTELYKLRDSYIP
VIRLHQKLGIKDARTDLEEGLLVVVEDGGKRAGIFVDDLLGQQQVVIKSL
ESNFMKISSIAGATILGDGTVSLILDVTETLASHKGGNVQSNAA
>Tcr_1394 methyl-accepting chemotaxis sensory transducer
MKFFNFISINLRLFINTLLSILFLMSIAYIGWSALSEVRVKATSLSDLQH
QQSDRIANFQQSLILTTQLSNEYILSQSQSASQKFNSAIDELKKQTEAML
SVLHAEENQKAIQTLETVLRKYKKATNSNVFLKKEVNNTLEFGIEPTTET
LKKATTTLLKTDLATEESTLSEALTSIQKRLNASQLILGKMLSTKNPELI
KAFNENGLGDDANSDIETIVSAFDGNFQYMDTLDELVSARDGYQESFSDI
KDYMATETDNNGSLISLINEANDIIRQLSSQSQQNTSALINELNVLSNEQ
IHQLAIISIISLILMILLNLVVVASITRPLHRIKKNIAFISKTGDLKQWT
PITGKNELVDMSNSIQELILSFRQITTELQDVGIALSNGEFDKKVEQDYA
GDLLTLKDNFNASIHQISDTMTAIQKMSQALNQGNLSFTEPSDQYLGAYR
IVIESLNSAMETQMNAIEAVKDVMQMMNKGNFSKRIELNMPGDLSQLKTY
LNTSLDKLDEAITHKSYILDHFRQGNFAFEIEGEFEGKLQELKNNMQDMA
SNISNMLSDVQTASSNAVSGVQEISMGNQDLNERVNKQALAIQNTMNHMQ
QMVQQINESLSSATTVNNKSTAAKENTLSGVSIVNRMSEAIKEIEGASQE
IANFTQVIDDIAFQTNLLALNAAVEAARAGEQGRGFAVVATEVRSLASKS
AQAAKSIQAVTQKSLAKVEQGIELSELTKKSFNENAQAIDEISSMMTEMH
QSLNHQSHGIEQVNQSLTEINEITQHNASLVEQVTQTSSHIIESVKGVED
QLLHFKLKPNQMFKSLPSANEELESVKEAEVLALLPEKIS
>Tcr_1723 type II secretion system protein
MVWVLLAVAILFFTATLLVVKTFKKNQQAQEDIEYLKLRIGLVNQYQANV
NRHKTCHWCALGAFMGPKNEKEINANRQFLMNAGFREEHHLGAYFFIKYA
LVFSSLLVMLVLWSWFQVSPIVAILVPLAFLLLPERVLIFWGNHRLNKVN
IALPDFLDMANICMSAGLSYLEAIKRVSKELESTFPEICYEFNFLIEQIK
IGVPRQEALKQFALRNPSKDIQDLVQMLIQNEKLGSPISTALNEFSRRMY
QKRESAMEEKAAKTSAKMAIVILPFLMLPYFMLMLGEKIVMLGRNF
>Tcr_0758 response regulator receiver (CheY-like) modulated CheB methylesterase
MSKIKVLIVDDSALVRQMLQEMLKSDPEIEVVGTASDPYDAREKVKQLHP
DVLTLDVEMPRMDGVTFLKNLMRLHPLPVVMISTLTEKGADITFEALDLG
AVDFVAKPKIDLQHTFEDYTDEICRKVKTASKVSKWQLERQYARYVANKE
SKPKVLSKPGSLVSKVVEKFTTDAIVPKKAPSDFSKPSHKVIALGASTGG
TEAIKEVLMRLPSTTPAIVITQHIPASFSLPFAQRMNSVSEMEVTQAEDR
QPILAGHVYIAPGDKHLLVERTSSGYICRLNDGPPVNRHKPSVDVMFRTV
VQSVGKNAVGVLLTGMGADGAKGMKELQEIGVPTIVQDEKTCVVWGMPGE
AVKLGAADYVLPLGSIPEKILALIKK
>Tcr_1999 methyl-accepting chemotaxis sensory transducer
MDNFNMAFMNYNKPSILRKMLLVFLGFGFFMGISFPLFANLFVEWKEGML
AWFVLSCIIAGISIGVFNYWLLNYMLLNRLKRIGEVANAISNNDVSHNCS
LISFDFIGDMANSFNLMSENLRNMISQISDVSSHLNQSANEMVSVTHETQ
NGVSRQQEGTQMVVSAIGKMTDTVTEMSNNTFAASEAAEKANSATHDGSM
VVQDTVSSIQALADEVEKTANAIQLLKEDSENIATVLDVIKDIAEQTNLL
ALNAAIEAARAGENGRGFAVVADEVRTLASKTQESAKKIESMIANLQTAA
QQAVDVMNKGREQACSSVKKANEAGDSLKHIAAAVNTITEMNNQIANSAE
DQRKQTEVVNNSVNQINDIAHTVAQGAAKTDNASKEVDNYAAQLSTLIGQ
FKTRK
>Tcr_0739 Flagellar biosynthesis protein, FliO
MKYLHHKIFQAWLFFALFGANFSVFSATPEAQSLSPTLEPSSYITQISLS
LIFILLIIFAAAWLLKRFGRINGLAGSQMKVLGVMSLGQRERVVLMEVGK
KQLLIGVTASRVSLLHELEEPVEVEETQPVGNAFAKRLQEALNKNKKESS
KA
>Tcr_1469 conserved hypothetical protein
MNRALYVAKTGLEAQDFRLATISNNLANANTYAYKTGRAEFNDLMYQNVR
QPGAQATQNEENTFPSGLQLGTGVKAIGVQKIHTQGNAMVTDNQLDVMIE
GKGFFQALDQDGNIMYTRDGSFEVNQNGDLVTSSGYLVEPNINIPLNTTE
VFISSDGVVSAKEPGNPQPIAVGQLELATFINPAGLEATGKNFYIETLAS
GAPNVKNPEIEEAGSLLQGALESSNVNTVEELIGMIEAQRTYEMNSKAIS
AADGMMQYLNNNV
>Tcr_0570 methyl-accepting chemotaxis sensory transducer
MEKFLQKLTIKQKMRFGFGVIWTVLAIITIQAAVNLFIVRENVKEVVEVK
QPIALQANEMANVLEKSMNALSMYMLTNDPENLKSYAKGIENSEEILAKL
NAKISANQSKEDAEVLDRILNDLSQLPTFIEQVKVLQSDRSKKFPAFEFV
NREMMPSAVLIQQQIGLMIDSELVDLNSHRKPILDALLNLQKDWLNVLSG
LRGYVAFRNESMAADTENYLNAVERGLEYLATQSQFELTLEEEDGVEKTR
AAYERYRENFMALKRIHQGPKWRMDTWLMENKIKPLFNSLETDLEHISES
SVTQMQETSQDVVDSTLRNLILLLSLSVFGQLIGMIISRKVTNSVVKPVI
RSANAMKDIAYGEGDLTRRLHADGKDELADLARYFNEFISKIQSTLKEVT
ETVSELEVSSRGLLEVTHETKEGVEQQLEASQRLSRSMITMSEKAKSVED
HSHNTSRATDQAAERVKEGGEVVQGAAQNIRNISDGMEKITQAVMQLNDD
SQTISTVINVIREIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLA
QRTQESTVQIERVIEKIRKATHETVKVVEVGRETTQAGYDSVMKVERVLS
PVVILMDDINKMSSEMLTSAQSQTSLAVEVNEHINQIHGVTQKTVEGAGN
TESSSNRLQQLADKLDRLVHQFKI
>Tcr_0027 methyl-accepting chemotaxis sensory transducer
MVDNKINLRFIVKVDKQNRINFINNEYADWLDYKPDELLKKSTSVFLVDE
TPEVVQKNIDEEVYRGRAVSLAVKEKKKNGETFWVDIRIQPVMEADEYQG
YTSIKQLILQEDRIAELEKTYQDIKKGKKTLIKGDVVNCHRHRFNKWFRL
NKLNIVHKVLAAVVLTAAFLLSLAYIYENEQKDFIFNEVISDQSGNIQDM
VDTYFNNKLDIGEAALAGILKMPGFAEAFAQKDMASLNVMLGGLDPYFAK
NSNNKGVKLQLVDRNGMSFYRSWAKQHKQFDVSWRQDVAYQNKSPGLHRT
YSIGKMALTLKNHIPIYDANDQYLGSAILIQGLGSVHKALLSKNIVFITA
VKKSYLTKRNQEVAKFPSVFNDNKLVLSSKKHYETDRGRQLVKDLQAMSS
QTLLEKGYVLDDRYLHIALPLKDEKQNVMGYIIASQTINKFIKTLNHRYQ
AAEDTTTAILITFIIVTILLMIILQYVVIRPLRKAERTMQTAVKNSDLFA
RLSNYGEDEIAKLGYAYNQQAMLSQVAISEINTAMEEIVAGRLNHQVTFP
FESDYGLLKDRMNETSQSLKNTFAAIADVMNDLKMGHFDAQSNASLQGAY
AEVVEDCLSAMHDLNVIFSDISRVMELAAKGKFDEFIHVAAEGDVKRLIE
TLNSTLKQLDAGFSDVISAAQRLAKGDLTQPIETDYEYKIGEAKEAINKS
MSGLGVALSKILEITNQLSLDVSTVNEGTQSLNSRTQEQAASLEETSSAM
EQTAAQTRSNLDHTQEVNRITEKQSGLLTDANKVMVDTQHSMGSIEQASN
QIKEITTLIDSIAFQTNLLALNAAVEAARAGDHGRGFAVVAGEVRNLAGK
SADAAKQIGKLVENTSEAIAVGANQVEEVAQSLNNITNETLKVRELVENV
TRASKEQSHGIDEVNKAITTIDGVTQQNAALVEETTATTESMNRSAEELM
DAVNAFKIK
>Tcr_1478 anti-sigma-28 factor, FlgM
MDIKNINQNLVNNRLNDSANNSPKGNATSTPSGTPKSTDKVTLTDVSSQV
SNLEKQAAASNIDNSARIEELREAIKDGTYQVDAEKVANKLIQTEALLAG
S
>Tcr_1271 response regulator receiver (CheY-like) modulated CheW protein
MSTTLEQVEKTAQLSKNNQMSLMIFQVQFPREGAPPPPYYGMNVFKVREV
LEARVYELADMPDANPLIEGMIELRGVYLPVIDLPKWMGFEMSEEEREKS
IIIVSDFSHNFIGMRVAHIHGVEEKEWTDIKPATNYNVDVNTNQVINHTY
LENSDKLCFILDIEKLLIEAMPSMAEKIFSSAKEVNSEEHVFTDEVTNRK
ILFAEDSKSIQQYMSMVFDQLGLRYQGFENGRLLMDYVNSLEDMDDISMI
FTDLEMPVASGHTVIKELKANPKTRNTPIVVHTSMTSENNSREVLDMGAD
HFVGKVDTNLIVETIKKIEDKYYKK
>Tcr_1448 flagellar protein FliS
MDMNMRNKFAQQYANNYVETAVSEATPHKLVEMLYDGLVKHLTLSKVFIE
QQKYEQKSEHINKSLAILNSLRDGVDLEKGGEVAENLFGLYDYCYRTMIE
VSAKNDTALIDEVIEHIKTLNDAWKAMPEEIKRSSKDQIERESA
>Tcr_1502 Flagellin-like
MAVESLNATNASSPYMNDLFKVNQSLTSGSRINNSADDASGQAIVTSLTT
KIKDQDIGVQNANVGINLLQTADGASNSITQQLQRLSELSLQAQNGTYSD
AQRAMLDQEFQQGLKSINQFAESTSFNDIKLLNADTPTVDIALGPDNAST
LQLPDLTVANLGLTGTDISTSTNAEAVQSKISDVLGLISDSRAQLGSQQN
GLVSAANNLMNQNVNSQSTRSQINDTDYAKAVTDQARQQVLNNASVAMLA
QRNQNYGNVLPLLN
>Tcr_0253 General secretion pathway protein G
MRTEKLNQRNQNVAKQQGFTLIELMVVVVILAILAAIAVPQFMDRPDEAR
IVKAKQDISSLSSALQLYKLDNYRYPTTEQGLEALVKKPTAEPDAPNWKP
YMQQLPKDPWGQDYLYLSPGEKGDFDLYTLGADGEEGGEGVNATIGNWMR
>Tcr_0574 methyl-accepting chemotaxis sensory transducer
MFIGIFGAVLFLLVSNLVAQYIFGQTSKTVNEVVNENQVKVTLLNELKNL
TDERAILSRDLVLTEKEDLIESTKKRLSETRGEIGDVFSSLEKMSLGAKE
QAYFEAIQQNVVAANVSFGSFMVMVDEDFKEDAADILMGEFGDKYQAFTD
IVADFKQYEEQKNTLAVQELGEQEHIGVISLWSVLGVSVLIFSVAGFFVA
RSFLKPIIAMRETMTRIIQTGELNHRVEIYSKDELGETSIAINNLLETIH
GAISDVNSLMGEVSQGIFERTIEHEYKGDFLTLKKGVNQSVVQIHNMVLM
LRDTANNLRNGVLEPVKSNETVLSGDYADVMNDIEVSMNRIGETVQDISK
TLESLSRGDFSKRVTADARGEFITLKDAINTTVEGLEAFVEEVALVQTNI
SEGDLTKLVTGSYHGKMAVLKDTLNSSTRNISEMIGKVGSVTRLVADESR
SIADGSESISTRIQQQTVSLERTSTQMMQMTNTVRSNADSANNANHMTQE
AQKKLTEGVQIMQKALESMDKMSAASQKINDIITLIDGIAFQTNLLALNA
AVEAARAGDHGRGFAVVAGEVRNLAGKSSDAAAEIKKLIENSVAISDQSG
HYVKETSDALSQLNASMDEISSMISTIAKASNDQAVGIDNVSQAISEMDS
TTQQNAGLVEEAAAGSQDLLQQSSDLLSLVREFKVDNQVLQRVERIQQSD
SAKEFEKMVQAHLAWKSKIRAFVDGMDIGVTYEVATDPTACALGQWYYGE
GQVYSDLPLMETLGEEHKEMHLAIKRVMDAKEIGDEETMDKELTQVDKKS
EVVVGLLYQLMEEVG
>Tcr_0252 General secretion pathway protein F
MPSFEYQALTSSGQTQKGTQEGESARQVRQQLRDQGLTPLEVTPVVDRRK
ALPSLHWLTPNIPIADLSLMTRQIFTLLGAGMPMADALRSVANQAENKLM
KRFATGIFEKVSEGHSYAQALTSSGFNLPRDYVATVRAGEESGHLVEVLS
RMAESIEKQEKIRKKMRSALIYPTLMVVMAVAIILFLMAFVVPKVVSVFD
NMNQNLPPLTQGLLNTSDFLDQHWGWLLLGSIGLIVVYKMLMQKERWQYR
RDRALLSIPALRKFLVYSASARWARTLGVLHASGVPITEALKISSEVMNL
LPIKQKVAQMEVEVREGQKLYTSMKQAKFFPPLLLNLVETGEGNGQVDNM
LLKGAEHYEEEVDTAATTLVSLLEPIMIVIMGGVVLTIVLAIMLPIFQMN
SMVG
>Tcr_1466 flagellar biosynthesis
MAGADIQVPKLEAYQQIYGNGGSFNDLKQTAKQDQKAALRPVAEQFEAMF
LSQILKEARKVKFDDGFMDGEQADFYKDWYDKQLSQTLAAKGSLGLADKI
VEQLSPKLPSMTSTQYKELLESRENKQASQSDDLPIESKKPVQTTSDSLA
LRQLK
>Tcr_1450 hypothetical protein
MADVNVMQPSNLATIETINPKVLKKDALGTKLTESSKEMHSSQQEATIRK
VQKTQDVRLSKENLDGLIERVNQDLSGYDSYLKFERNEEAEKMVVFIKSS
DTDEVLRQIPSQEFLTVSKNIKNFLEMRQQLSEKIAPVLGLIADEKV
>Tcr_0077 methyl-accepting chemotaxis sensory transducer
MFKRLGLQPKIIFLSLFITLLVIIALGIVGWVTYQTQFKQIAHNTAEEMV
QDVDRSLDKKLDIGVTNAVSFASNRELIQAIVNNDKPLVNEILGNISETY
KKHTQYKNVKIHIHTPENRSFLRSWRDKNGDDLSAFRFGVQKVINEKKPI
RVLELGRAGLAVRGIAPLFHNGEYIGSLEFIQGLRSMVKDYQERDMDYLM
LLNQEALKISVKASKNTPIGNYVLANNKWFSSESIELAQKIDWRLLNKQG
WLIQDGRLITQIPVKDMRGKLVGTQIIAEPTTSFDAEMAGILNETIKQIL
SILAIVILMVIAILVSLNKLVIRPVKELQNTISTVLTQGDFSVRVRTDNN
GNEVNLMAKDFNELLQMLQNVIASITESMQSIEKGNLSTRVTAEAVGELD
GLKNSVNQTAQILDDTMSEIERVLGEMQLANFSVDVKDVPAEGAFKKSLD
SIHETVASLKSAIAEINQTMMAMSQANFTQPIQTPLSGDLDHLKTNINNT
LVDLENGFNGFTHSLTQLTSGDLTTRVEGEFSGQLAKLQDIINSSLNNIG
SMFTEIKFMSDGSSQNVTQVSRGNMDLNERTQNQAASIEETAASMEEITS
TVQHSLSNAKEANHLSQQAKEEADKGAQIMDQTRSAMRGIEEASGKISEI
TTLIDSIAFQTNLLALNAAVEAARAGDHGRGFAVVAGEVRNLAQKSADAA
KDIARLVQDTAEQIANGTELTEQSSSMLSQINQRITSVSEMVDAITKSAE
EQSLGISQINQAVSSMDQITQQNAALVETVAEDTQSMDKKISRLVELTQI
FKIDIPQLSLGTTVSTGNFDFAQARRAVKACRAHISGLLHTGSKDFDYNM
VVNPENSELGKWLATTGQQYQQHSAYQQLVSLNKAFHQSLEEAVQLLDKM
PLLPSEKVAQIEHASDALIEAINQLENAEANLSENKALPHH
>Tcr_0745 GTP-binding signal recognition particle SRP54, G-domain
MKLKRYLAPNMRKAMILVRDELGDDAVIMSTRNTDDGVEVVAAIDPEAQQ
FKEEVPAQARVSYQSPESGSQYGAASMQNNTEIAKMADELKAVKQMLENQ
LSGLAWNQTETQDPNKIHLIKRLVKLGIGWDLAQRLVSDVNANNDQAWSE
VLASIEAMLPVDDRDIIESGGIVALVGPTGVGKTTTIAKMASRFVMRNSS
SQIALVTTDCYKIGAQAQLKTFADLMGVPVHVVNSEGEMYSLLSSLATKK
LILIDTAGISQKDILLTQQLTKQKAGLNHIRNYLVMSAATQLSVMKDIVR
SFDQVGLKGCILTKVDEALQLGNILTVLIENQLSLSYLSGGQRVPEDLEP
VKARDLLDKAMVLGHQNQHLKEDEAFRMGMGKEISDAQ
>Tcr_1587 OmpA/MotB
MNDISDKDLADAIQEHPEFQKKTRASLKKQSVDKEGGQDEWLITYADAMT
LILAFFILILSISEIKQDKFETLQTNLGQGLLKKEKVVNPLQNLESALSK
VLESNQINPAEAMTLNENELRIDLPGELLFEVGSTQLEPKSKQLITALAK
EINAFPLHNYLIEIEGHTDDTPIHSIRFPSNWELSAGRAISVLKVFFNTG
INKQRLKAIGYADTRPKKPNRTKKGIAIPGNQATNRRVEIKVAKSSIGAL
KSPEYRLKH
>Tcr_1329 hypothetical protein
MATKMNTPQKVNSCLQYIDNRLETTSEQTIQIAEMIIEDIKNLTQAYPEA
IRNNELRTHAEKVRDTQMKWVNQLHEIILEQTDRDLNGQVIQALQNFMNT
LNKKQLKHLDFDLPAAVRREQPETEHEYLSQEEIEVLMDSHLKSGHTSST
HH
>Tcr_1435 chemotaxis protein
MDLYLGGYLPHGSIGILIQPLEVLIICGSALGAFIIANPGWVVKKSFSGA
LGLAKPDPYNKEAYVELLGLMFRIFNKARREGLMAIEADVEEPHSSELFN
ASPKVVSDHHAVDFICDYLRLMISGASNPYQLEDLMILEMDIHHHEAAAP
AEAVGKVAEALPGFGIVAAVLGIIVTMGYLDAGPLEIAHHMSVALVGTFL
GILVAYGVVGPISSDMANRAHNEGAYFGTIKTCLMANLNGYAPQIAVEFG
RKSIPASERPSFQELEEFLQTQK
>Tcr_0743 flagellar biosynthetic protein FlhB
MAENEDGTEKSEEPSEKKLREAREKGQVPRSKELTTLLMTLGAAVFLYFF
GAQMMQDFETLFIKGLSFDRSHAYDFQMATNLVLGLVVHSIYMMVPFLLL
MVLIAVVSPMLLGGWNFSTQALAPKISKLNPVSGIKKMFSMNALMELFKA
FAKFTLVSVVAGFFLWYSYEEIISIGIEPPKQALAHAGQLIVEAFIFVSL
SLILIAAIDVPFQIHQHVTQLKMTKQEVKEEHKQQEGSPEVKGRIRQLQR
EMSQKRMMQKVPEADVVITNPTHFAVALKYAPDEMAEPMVLALGSDFMAA
QIRTLAKEHNIPLIEAPPLARALYYNAEVDRPIPYELFRAVAAILAYVYQ
LRDGKRTDRVDFENLPIPEEMKTDEVPSGSE
>Tcr_0361 methyl-accepting chemotaxis sensory transducer
MKKPTLWSRTKISTLSNLLLIMMAGAGIFFTSAFSLLHHEIFLVQQDWQT
LHPLLLNSSAQSTSSEVVRLSHHLTEGLAWMSQLTLIFIIAVLIAVGAFF
ILMYNTLMNKIVRPLRTLEKGILEITSSNDFSKTISIKYQDEVGQVSQSF
NQLSHNLKSIFDQINDRLAEVADGKFNIRCDVEVYGDLEVLKNNVNASIG
SIELTMNSLESISQAIAQGDFSIRMDQNVKGSLRKNVDFAMQQMDQIIDQ
INQVMRKVNHADYSQRVNIETQGRLTELKTFINQTVDTVSISIQALNQAV
DSLHQGNLTHQIETSFKGELNLLKENLNGTTSYLNDTIIQVMDGSTDVNA
GIEQIAQGNQDLSHRTQGQAASLEEIAAAVEQMTSAITQTADNGQKAQTF
SADTLALTDKAHHVMGESIDSMAKIKAASERISTFIELIDSIAFQTNLLA
LNAAVEAARAGEQGRGFAVVAGEVRSLASKSSGASTEIRTLIEQVVTQVQ
QGSSKLDETNSEFERVTQGIQSVNDLITEISHSAQEQAKGLSQINQAISE
LDQGVQQNAALVEQTSDSAQNLTELSQSLMRSVSQFKTSAHAALPKKLIG
Q
>Tcr_1452 Flagellin-like
MAMVINTNMAAINANRILSNTTVDQQSAMERLTSGKRINGAADDAAGLAI
TTKMTTQVMGTDMSIRNANDGMAKIQTADGATEEISNMMQRMRELGVQAL
NGTYSTANRSQMQEEFSALQEEIDRVAQTTKFNGVNLLNSAAVGASTAKV
FHVGWESGVNNKISMSVLNVGTSALSAGGVTLGSLTLTSTATGTTAASAA
VSKLDVVMSKLNLQRASWGAVQNRLESTVSNLSNVNENIQGARSRIEDAD
FAKESANLARTQVLQQAGMSMLSQANQQSQNVLSLLR
>Tcr_1467 Flagellar P-ring protein
MFTRKSVILMAVLLIWSAVSYAERVKDLANVAGVRPNQLIGYGLVVGLSG
TGDKTSYADQSLMSMLNKFGINLPPGTKTNSKNVAAVAVHADLPAFSKSG
QRIDVTVSSLGNAKSLRGGTLLLTPLKGVDGNVYALAQGNLIVGGLDASG
ADGSRITVNVPSVGRVPGGGIVEKTVNTGFDLGNTITLNLKNSDFTTATN
LVNAINAKLGKGTAYATDAESVEVMAPRIPNQRVAFLSVIENIEVTPGVD
SAKVIINSRTGTVVIGSNVKVSAAAVTHGNLVVKVSESKDVSQPNPFAGG
NTQVTPKTELSVESEGKGRMFKFPKGVTLDDIVQAVNKVGAAPGDLVAIL
EALKQSGALSADLMVI
>Tcr_1814 hypothetical protein
MKLGIKKVHENEWLIHIGYASIKMDRFSVELLNITLEHLIALEHGQTHSI
LNSYIELGRKIKELTPGGAQLLVRSIDNQDLLKLMQVANDAALNEMVVSN
VGSILAKQLSADLEKSIMPSESDAKVAIKRIVEKMFELESQGKIEFMDEM
TEYI
>Tcr_0385 MotA/TolQ/ExbB proton channel
MAGGSLISLWHPAELVVIIGLGLGVFLGSTPVYIWLKTMTYLGRYFGGGR
VNKKIYVEVLGLLDELSRLARSQGLLALENHVVAPESSSIFAKYPLILKH
KELKKFIVDNFGYLLLNPPQALSFENYLHDQIEDITQSMMEVPKATGKIA
NLMPGFGIIAAVMGVILTMNLLGGDMDVAKIGNSIGVALVGTLTGIFVAF
SIIAPFTHAVEVMIRQDKAIFVVVASFLTAFAHGVSPSMALEVGRQRIPA
EFEVPREG
>Tcr_0358 MotA/TolQ/ExbB proton channel
MSKLATLIGVFLGLVILILSMFDFEKGHLLSAFFNLQGLLVVLGGTFAAT
LINYPLNQMGCFFRGFVKVFASEPHSENEAIEQIVYLSHINQKKGILALE
KEIDLISDKFLRFALSEMMVYRDIHHLSTSLENHLNSMRLRHVGCQDVFN
NMASYAPAFGMMGTVMGLIIMMTAQVTGAEASASGDASGDMLSSLLQGMG
LALVTTFYGVLLANFVFIPVAGKLKVLSDAEALKNEILMFGILGLKKEQS
PLLLRESLTAFVNEKNKQKLEISLG
>Tcr_1523 OmpA/MotB
MSKKSDDCPTWLATFADLMSLLMAVFVLLFAMSTLDAKKYEGIVESLTNT
LGHGAGMSQVQLEYFKKTEQINPIPMQSSKIEARPEKLKPLYESIAKTYE
KSQQESNIEVTIDEERQQVKVSFPERISFPTGEADLKPGFSVQLRKLKNL
IDNTILVKAIGHTDKRPISSDRFRSNWELSSARAAAVIQQLIDDKIITPD
QAEVIGVADTHPVDEQENDAAYALNRRVEVVLIPHSHEHFKRRNIEIE
>Tcr_0653 hypothetical protein
MSDTADDLLDELSQLEDASSDMQKEVKTASDNTKKLEASGNADSLDSAAL
SLEAAKTAQLAAEQSQNAADAAIKLSHEQKAQIMELSDSNIAWRQSLRTA
TNELKSAKNAVTIMMTVAIVVSVISVSIMGWLLNSLNKKNEVLKGDVFDI
INTENTLFNKNLNLKIDQLSSLIEALAGDIQRLSRSSSQQNLSMNEEKRV
PMPATTSPKPEEPAAKPAEAAVSQESPAPAIETKTIQPDLTALKSEMKHL
SNSREEQLKHIQGLLDQILKTQEKIQATTLHQASKKQVMPATATTVVSSG
LTDEQVKKLNGIAWAVSTQRKLLKEIQATLNAQKTVKSAPNNTPKALDKI
DASLKHLSTQVRELKTQQDHIQKKVQGLENVTQELASRPQPYSYRSEVPP
VQTINE
>Tcr_0750 CheA signal transduction histidine kinases
MDEEILQDFLVEASELVEQLDEQLVELENSPSDSDLLNAIFRGFHTIKGG
AGFLGVTPLIEVCHRAENVFDKIRNGDVEYDSTAADVIMRAFDVITDYIQ
QLNDGARELEEADEGLLSELDALWKGGATPQPASEPAQEEMTSHPKLELP
EGVDPDGEISDDEFEALLNQRDALSGSDSSESETEEVKLALPDDVDPDGD
ITDDEFEALLNQRDMLEGIQEPQETVSATPPPAPETVKPTPPPAPKKESK
PETPKPEASKAATAESTVRVDTRRLDEIMNLVGELVLVRNRLLTLRSSDG
PEEALSNAVGNLDHVTTDLQASVMKTRMQPVKKVFGRFPRVVRDLARKLG
KEIELELKGEETDLDKNLVEALADPLVHLVRNSVDHGVEMPDVREQAGKP
RKGTVILAAEQEGDHILLSITDDGKGMDPDVLRRKAVEKGMMDEVSANQL
DDKAAFELIMSAGFSTADQISDISGRGVGMDVVKSMITKLNGSIDINSVL
GEGTQIKIRVPLTLAILPTLMVSFEDDSYAIPLTSVQEIFDYDASQINRI
DGQMMVRLREKSIPLLFLSDWLAPDQVKENYEGDKVIIVSIGNQRAGLVV
EQVNGQEEVVIKPLGVMMKHLEGYAGATITGNGNIALILDLPGVIQRFQY