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# Shigella sonnei Ss046, Ss046

>SSO_2391 putative minor fimbrial subunit
MKKKRTLFFISSLMLLGSGTTIAGDNLHFTGNLISKSCTPVINGSQLAEV
HFPAIAASDLMNLGQSERVPLVFQLKDCHSSTLFNVKVTLTGTEDSALPG
FLAFDSSSSASGAGIGIETAAGTSVPINNTTGVTLPLNQGNNSLNFNTWL
QAKSGRDVTSGDFSATVTATFEYF
>SSO_2420 putative tail component of prophage
MPVPNPTMPVKGAGTTLWVYKGSGDPYANPLSDVDWSRLAKVKDLTPGEL
TAESYDDSYLDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWF
NEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPS
MAEDRSTVTATTGMTVTPASASVVKGQSTTLTVAFQPDGATDKSFRAVSA
DKTKATVSVSGMTITVKGVAAGKVNIPVVSGNGEFAAVAEINVTAS
>SSO_3900 putative fimbrial chaperone
MSRKSCLIRLFKTTVSCKLFTAIILSVFLGQPALTYAGVVIGGTRVVYLS
NNADKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSR
>SSO_1980 hypothetical protein
MLVGDGKETGITTKIATEVKGYLADDGIIDSAQDSINATLKKLTKQYLSV
SASIDDTVARYTAQFTQLDTMMSKLNNTSTYLSQQFTAMSNS
>SSO_0024 hypothetical protein
MAASPDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYV
NQQQQNNDTSLGTNLSWRTPIAIIDGSYSHSKNAWQSGGSISSGLVVWPG
GINITNQLSDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLIIPHREN
HLVLDIANSESETELQGNRQIIAPYRGAVSYVQFTTDQRKPWYIQALRPD
GSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFC
TITFQHVIDENKTYICQ
>SSO_P144 adhesion protein, fragment
MLPPNIRGYAPQITGIAETNARVVVSQQGRVIYDSTVPAGTFSIQDLSSS
VRGILDVEIFEQNGKRKHFQVEMCRCAFLIQTWSE
>SSO_2436 putative endopeptidase
MSRVTAIISALVICIIVCLSLAVNHYRDNAIAYKEQRDNKASELEKANAT
IADMRKRQRDVAELDARYIKELADANATIESLRADVSAGRKRLQVAATCA
KSTTGASGMGDGESPGLTADAELNYYRLRSGIDKITAQVNYLQEYIRTQC
LK
>SSO_0026 hypothetical protein
MAAWRYASQDYRTFSDHLYENDKHYHQSDYDDFYDIGRKNSLSANIMQPL
SNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNNWQHISYTFSASQSYDEN
NKEEERFNLFISIPFYWGDDIG
>SSO_0947 putative fimbrial-like protein
MRRRFSILIWFTSEGVMLKRIIWILFLLGLTGGCELFAHDGTVNISGSFR
RNTCVLAQDSKQINVQLGDVSLTRFFHGNYGPEKSFIINLQDCGTDVSTV
DVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYS
LHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
>SSO_1229 cheA, sensory transducer kinase between chemo-signal receptors and CheB and CheY
MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSI
KGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE
QLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQ
DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILP
GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV
EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH
GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ
VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV
GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
AMLIFAPGFSMAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTT
IRILLPLTLAILDGMSVRVGDEVFILPLNAVMESLQPREADLHPLAGGER
VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI
GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA
NTAA
>SSO_1234 cheB, response regulator for chemotaxis
MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNP
DVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELG
AIDFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAG
PLLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFA
DRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELARSGANYQIKIHDG
PAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAW
TLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI
>SSO_1233 cheR, response regulator for chemotaxis; protein glutamate methyltransferase
MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMV
YNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREA
HHFPLLADHAHRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKV
FASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQ
ELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVP
LLKPDGLLFAGYSENFSHLERRFTLRGQTVYALSKD
>SSO_1230 cheW, positive regulator of CheA protein activity
MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIAN
TPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGI
VVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKL
LNSEEMALLDSAASEVA
>SSO_1236 cheZ, chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator
MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPD
ARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFAD
PIDLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGLVIK
RMMDVIQEIERQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKVGVVA
SQDQVDDLLDSLGF
>SSO_1053 csgA, curlin major subunit
MKLLKVAAIAAIVFSGSALAGVVPQYGGGNHGGGGNNSGPNSELNIYQYG
GGNSALVLQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSA
TLDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY
>SSO_0152 ecpD, probable pilin chaperone similar to PapD
MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENK
GNNPLLVQSWLDTGDNNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTA
STSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDG
LKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYP
IDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL
>SSO_0273 fhiA, flagellar biosynthesis
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNA
GLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGG
VCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSD
NGDIAHDVRNQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFT
GWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGY
KLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYA
IFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPA
QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSM
APRLAEDLSAVLNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKD
HILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNLVNQAQQGG
KVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARY
ARLFAPGLHVLSYNEVPDELELKIMGALM
>SSO_1092 flgA, flagellar protein for assembly of basal-body periplasmic P ring
MLAIKRSVAIISILFTPLSAASNLTSQLQTFFSAQLAGVSDEVRVSIRTA
PNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVA
AMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLSPDQP
IQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVTQNARVRMV
SGLVVSGVVDADGNILINQ
>SSO_1093 flgB, flagellar protein for cell-proximal portion of basal-body rod
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELK
KVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTV
DMDRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN
>SSO_1094 flgC, flagellar protein for cell-proximal portion of basal-body rod
MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ
VNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVG
EMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ
>SSO_1095 flgD, flagellar protein for initiation of hook assembly
MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTN
PMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV
MIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI
DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA
LVQGVLRGNSGNTLDLGTYGTTTLDEVRQII
>SSO_1096 flgE, flagellar hook protein
MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL
GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQF
KLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTT
TASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF
VKTGDNNWQVYTQDSSDPTGTAEPAMKLVFNANGVLTSNPTENITTGAIN
GADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG
NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN
FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL
R
>SSO_1097 flgF, flagellar protein for cell-proximal portion of basal-body rod
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLS
LPTRTLVTASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYT
RNGSIQVDPTGQLTIQGHQVIGEAGPIAVPEGAEITIAADGTISALNPGD
PANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLR
VMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLLSM
S
>SSO_1099 flgH, flagellar protein for basal-body outer-membrane L ring
MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGS
IFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDG
KTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTV
TVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQV
ADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
>SSO_1100 flgI, P-ring of flagella basal body
MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGD
QTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTESLPPFGRQG
QTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASA
GGSSVQVNQLNGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQI
ADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQVNVTPQD
AKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGG
QTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQ
SMQSAGCLRAKLEII
>SSO_1101 flgJ, flagellar biosynthesis protein
MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMFVQMMLK
SMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTP
EQPLPEESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSK
AFLAQLSLPAQLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNL
FGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYLEALSDYVGLL
TRNPRYAAVTTAASAEQGAQALQDAGYATDPHYARKLTNMIQQMKSISDK
VSKTYSMNIDNLF
>SSO_1102 flgK, flagellar hook-filament junction protein 1
MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGA
GGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLS
TSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQY
LRDQDKQVNIAIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLD
QRDQLVSELNQIVGVEVSVQDGGTYNITVANGYSLVQGSTARQLAAVPSS
ADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQELDQTRNTLGQ
LALAFAEAFNTQHKAGFDANGDAGEDFFTIGKPAVLQNTKNKGDVAIGAT
VTDASVVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELT
FTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEKDAGDSDNRNGQ
ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQL
SNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR
>SSO_1103 flgL, flagellar hook-filament junction protein
MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAV
VLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNG
TLSDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEAN
GDYVGGTESIKQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNL
FAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAEL
GTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS
YKAFTDMQGLSLFQLNK
>SSO_1091 flgM, flagellar protein
MSIDRTSPLKPVSTVQPRETTDASVTNTRAAKTTASTSTSVTLSDAQAKL
MQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN
>SSO_1090 flgN, protein of flagellar biosynthesis
MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLL
ATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQ
IERNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI
>SSO_1240 flhB, putative part of export apparatus for flagellar proteins
MFNCVGCVHYIFNDPNLILGQIILLIREAMLALLPLISGVVLVALISPVM
LGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVT
GFYLWHHWPQMMRLMAESPTTAMGNAMDLVGLCALLVVLGVIPMVGFDVF
FQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADV
PKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNV
PTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR
PVQPTHLPVPEALDFINEKPTHE
>SSO_1193 fliC, flagellar filament structural protein
MAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAI
ANRFTANIKGLTQASRNANDGISVAQTTEGALSEINNNLQRIRELSVQAT
NGTNSDSDLNSIQDEITQRLSEIDRVSNQTQFNGVKVLASDQTMKIQVGA
NDGETIEIALDKIDAKTLGLDNFSVALGKVPMSSAVALKSEAAPDLTKVN
ATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTAGTKVYQV
QVEGQTYFVGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVT
AFVEDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGN
PVPNSFAAKTSDGTYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQA
IMREDDKVYTANITNKTATKGAELSASDLKALATTNPLSKLDEALAKVDK
LRSSLGAVQNRFDSAITNLGNTVNDLSSARSRIEDADYATEVSNMSRAQI
LQQAGTSVLAQANQTTQNVLSLLR
>SSO_1995 fliE, flagellar basal-body component
MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQT
AARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVM
SMQV
>SSO_1996 fliF, flagellar basal-body MS(membrane and supramembrane)-ring and collar protein
MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRT
LFSNLSDQDGGAIVSQLTQMNIPYCFSEASGAIEVPADKVHELRLRLAQQ
GLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGA
RVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVA
GLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEGRIQRRIEAIL
SPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQ
SGSGYPGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRST
QRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGKPLPLSNEQ
MKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
LLAAGRWLLVLLVAWLLWRKAVRPQLTRRAEAMKAVQQQAQAREEVEDAV
EVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINND
HE
>SSO_1997 fliG, FliG
MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNK
QLTYVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILET
RDTASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFD
ERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAA
EIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRL
LQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQ
VENEQKAILLIVRRLAETGEMVIGSGEDTYV
>SSO_1998 fliH, flagellar biosynthesis protein
MAAARIPMSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQ
LAQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGLEQGLAEAKSQQAP
IHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSAL
IKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPT
LHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
>SSO_1999 fliI, flagellum-specific ATP synthase
MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGA
TCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNIS
AEGLQSGKQLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNPL
QRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR
ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGA
AYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS
VFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH
IVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQR
NRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLE
RIFPTVS
>SSO_2000 fliJ, flagellar fliJ protein
MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYR
NNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNS
WREKKQRLQAWQTLQERQSTAALLAENRLDQKKMDEFAQRAAMRKPE
>SSO_2001 fliK, flagellar hook-length control protein
MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALASETTTDKAAPQV
LVATDKPTTKGELLISDIVSDAQQADLLIPVDETLPVINVEQSTSTPLTT
AHTMTLAAVADKNTTKDEKADDLNEDLTASLSALFAMLPGFDNTPKVTDA
PSTVLPAEKPTLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEV
ISTPSPVTAAASPLITPHQTQPLLTVAAPVLSAPLGSHEWQQSLSQHISL
FTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAA
LPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTVNHEPLAGE
EDDTLPVPVSLQGRVTGNSGVDIFA
>SSO_2002 fliL, flagellar biosynthesis
MTDYAISKKSKRSLWLPILVFITLAACASAGYSYWHSHQVAAEDKAQHRV
VPSPVFYALDTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSR
LLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVMYTA
FILR
>SSO_2003 fliM, flagellar motor switch protein FliM
MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQRRVVRER
LQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPT
NLNLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGNGRFPTKVEGREFTHTE
QRVINRMLKLALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVV
NTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSRNEDQNWRDNL
VRQVQHSQLELVANFADISLRLSQILKLKPGDVLPIEKPDGIIAHVDGVP
VLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
>SSO_2004 fliN, FliN
MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGGGDVSGT
LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL
INGYLISQGEVVVVADKYGVRITDIITPSERMRRLSR
>SSO_2005 fliO, flagellar biosynthesis
MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTG
VNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTE
EIPQTDFQSVMKNLLKRSGRS
>SSO_2006 fliP, flagellar biosynthesis
MRRLLSVAPVLLWLVTPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITS
LTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFI
MSSVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLF
ARLANTGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVI
ASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS
>SSO_2007 fliQ, flagellar biosynthesis
MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLS
FIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG
>SSO_2008 fliR, flagellar biosynthesis
MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMI
TFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGE
IIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLL
VDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLA
LGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEMFNL
LADIISELPLI
>SSO_1981 fliS, flagellar repressor of class 3a and 3b operons
MYTASGSKAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARLFMQDNN
QQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQAN
LRNDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV
>SSO_0114 hofC, putative integral membrane protein
MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLSLKRIAI
NSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSL
AHDLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQK
AQRQLTDKVKSALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLP
ALTQGIMTLADFSGEWSWLLVLFGFLLAIANKLLMRRPTWLIVRQKLLLR
IPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLL
TQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTGEASGSLDLMLDNLAHH
HRDNTMALADNLAALLEPTLLIITGGIIGTLVVAMYLPIFHLGDAMSGMG
>SSO_3899 lpfA, putative major fimbrial subunit
MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIV
PLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDG
DLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYT
AIDAEGKAEMKFIARYVATNATVTAGTANADSQFTVEYKK
>SSO_0272 mbhA, putative motility protein
MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPAT
VAVPEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLE
MEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKI
IITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA
DQMLLDSKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKL
DKQQVLSQRTR
>SSO_1227 motA, proton conductor component of motor
MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNN
GKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERD
IENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEE
IETHESEAEVPANSLALVGDSLPAFGIVAAVMGGVHALGSADRPAAELGA
LIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQCVKVTLLSNLN
GYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA
>SSO_1228 motB, MotB
MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISIS
SPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQ
PNIEDLKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRI
QIIDSQNRPMFRTGSADVEPYMRDILRVIAPVLNGIPNRISLSGHTDDFP
YASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDR
GPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVP
TMPSAEPR
>SSO_P107 mxiD, MxiD
MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDTVGSFFE
RFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKLTLLVGLIWYKDGN
ALYIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTF
YISGPPALVELVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNM
RGEDIVIPGVATVVERLLNNGKALSNRQAQNDPMPPFNITQKVSEDSNDF
SFSSVTNSSILEDVSLIAYPETNSILVKGNDQQIQIIRDIITQLDVAKRH
IELSLWIIDIDKSELNNLGVNWQGTASFGDSFGASFNMSSSASISTLDGN
KFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVSLVGERNSS
LEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFK
YKTSNISNIVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSE
TTLLEDEKSLVSYLNY
>SSO_2983 ppdA, prepilin peptidase dependent protein A
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYL
LYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWP
EVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQG
ETEGCL
>SSO_0116 ppdD, prelipin peptidase dependent protein
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYR
TAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESL
NGLSVVMTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN
>SSO_0507 sfmF, putative fimbrial-like protein
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKT
VDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLL
ALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRA
LASGVQPGVEKADAIFMINYN
>SSO_P114 spa33, Spa33
MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLTSVCGDW
VIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKI
TFRITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEF
CLGSSNVRLATLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKI
NLSESNGESEHTEVSLALFNYDDINVKVDFILLEKNMTINELKMYVENEL
FKFPDDIVKHVNIKVNGSLVGHGELVSIEDGYGIEISSWMVKE
>SSO_P117 spa40, Spa40
MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDV
MLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQT
KFVLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYF
FWINDRKIIFSQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIE
FILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILSEQTKSDIRN
SKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPT
VRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENTH
>SSO_P111 spa47, Spa47
MSYTKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNEIVARAQ
VVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLG
EVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCG
EGQRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYL
KNSEKKNRCVLVYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDS
LTRYARALRDVALAAGESPARRGYPVSVFDSLPRLLERPGKLKAGGSITA
FYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLAQKGQFPAIDSLKSISR
VFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENASQDKIYNK
ISVVESFLKQDYRLGFTYEQTMELIGETIR
>SSO_1414 spy, periplasmic protein related to spheroblast formation
MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDM
MFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAK
AEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERP
AAR
>SSO_1232 tap, methyl-accepting chemotaxis protein IV
MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNQQR
AALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTL
FKSFMAMTAGNEHVRALQKETEKSFARWHNDLEHQATWLESNQLSDFLTA
PVQGSQNAFDVNFEAWQLEINHVLEAASAQSQRNYQISTLVFISMIIVAA
IYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVYGRNEITAIFA
SLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQ
TAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEI
ATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMIDIVSSVTRVND
IMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQ
ADHLSSRVAVFTLEEHEVARHESAQLQIAPVVS
>SSO_1231 tar, methyl-accepting chemotaxis protein II
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQ
GELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQA
ATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYF
AQPTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALV
VVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLTIDGRSEMGDL
AQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL
EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMH
EIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLASRSAQAAKEIKALIEDSVARVDTGSVLVESAGETMNNIVNAVTRV
TDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALE
EQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNW
ETF
>SSO_1721 trg, methyl-accepting chemotaxis protein III
MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLWQADRDQ
RDVTAEIEIRTGLANSSDFLRSARINMIQAGAASCIAEMEAMKRNIAQAE
SEIKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKN
GMFEAIINHESEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQRTRLG
GMFMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEKIASGDLTMKDE
PAGRNEIGRLNRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADLS
SRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQ
TVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQ
GRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTM
STIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVE
EASAAAVSLEEQAARLTEAVDVFRLHKHSVSAEPRGAGEPVSFATV
>SSO_0153 yadN, putative fimbrial-like protein
MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNK
DGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMT
FGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVY
TKALDATTKSAVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ
>SSO_0670 ybgD, putative fimbrial-like protein
MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHQDDID
KEVELGQVTTSHINQSHHSDAVAVDLRLVNCDLENSSNGSGGKISKVAVT
FDSSAKTTGADPILNNTSTGEATGVGVRLMNKDQSNIVLGTATPDIDLAP
TSSEQTLNFFAWMEQIDQATPVTPGAVTANATYVLDYK
>SSO_0668 ybgP, putative chaperone
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLP
YLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGD
RETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKV
ELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTV
NTNTGNYSGSQFYLGYMDDYGALRMTTLNCSGQCHLQAVEAKK
>SSO_0948 ycbF, putative chaperone
MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRFIFPADR
ESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKP
GTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFK
LFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKAL
SNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP
>SSO_0942 ycbQ, putative fimbrial-like protein
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVA
ATKDSVVTLPNVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFS
GTADGVQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADS
AEQTVTFKVDYIATGKATSGNVNAVTNFHINYY
>SSO_0943 ycbR, putative chaperone
MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISL
GVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYI
GAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAY
PLGEAPAKLRCTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDK
YQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS
>SSO_2159 yehC, putative chaperone
MAAIPWRPFNLRGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKE
VMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQ
QVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLF
YRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNY
ETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI
>SSO_2160 yehD, putative fimbrial-like protein
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSV
SINMPTVPTTVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITN
DKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAI
PFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
>SSO_2393 yfcS, putative chaperone
MIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKISSPLTVLPPVQRI
DSMMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQT
RIKLFWRPKALENVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNAST
QKNGNPAAGFSPIVMSPKTSAPLNVKMGSVPVLTYVNDYGARMPLFFTCN
GNSCQVDEEQSRKG
>SSO_2394 yfcU, PapC-like porin protein
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDL
KRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPE
LVAQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQA
YLEYTYPDWDPPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGT
VGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEWSRYYAWRALP
SLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVA
HTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQ
EYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIAN
GWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMV
RTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYF
NIGSIRNVSISMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSG
TDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANY
HEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEG
NGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNKLPENAEATQSVVQATLTE
GAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDDGN
VYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAP
VVPDDIKPVIQEQTQQVTPTNPPVSVSANQ
>SSO_3105 yggR, putative protein transport
MPGYAQYRSFSEDLSMNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLME
AAPFEAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQ
RHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSSKST
TLAAMVGYLNQHADAHILTLEDPVEYIYASQRCLIQKREIGLHCMTFASG
LRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE
RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPA
VGNLIREGKTHQLPHVIQTGQQVGMITFQQSFQQRVGEGRL
>SSO_3180 ygiL, putative fimbrial-like protein
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDL
TVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTAN
TMTGQTDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNS
YQELNFKARMESPGKDATPGNVYAQADYKIAYE
>SSO_3981 yifL, Uncharacterized conserved protein
MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVETQTQSTV
PDKNDRATGDGPSQVNY
>SSO_4083 yiiO, Uncharacterized periplasmic protein
MMRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGI
SLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQA
EKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQW
QKSSSLKLLSSSNSRSQ
>SSO_4175 yjaI, conserved hypothetical protein
MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKR
NTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHN
DFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDE
LRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW
>SSO_3183 yqiH, putative membrane protein
MKLMRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKL
TNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQE
KIAQLPNDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELE
DDGVMSYEKVEIIRRNDGSIRFNNKMPYHVTLGYIGTNGITMLPQTQSLM
VTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSCNVSVAKR
DK
>SSO_3289 yraJ, putative outer membrane protein
MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIML
ETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQ
LLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFN
HQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGN
RSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALK
SQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSS
AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRF
IQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNT
FTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGY
QWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFDEANTRNWNYNSRQKSEI
QFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGIGYSLNY
QYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLN
GSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQ
YNYGVTGGVVIHTHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPF
GYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNA
NIGYRVLVIVSDRNGKPLPFGALASNDETGQQSIVDEGGILYLSGISSKS
QSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH
>SSO_3291 yraK, putative fimbrial protein
MSGNIGANPFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTG
YYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTG
VCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGM
GSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRN
AMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSS
DNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGE
LETGKFQGTATITVMVR