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2024-05-02 20:31:16

Gene list

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COG category: Cell motility
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 81

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_0947 putative fimbrial-like proteinchromosome CDS1021484 564 + 0.47695
NA SSO_2436 putative endopeptidasechromosome CDS2571789 459 - 0.51634
NA SSO_0026 hypothetical proteinchromosome CDS25267 369 - 0.384824
NA SSO_0024 hypothetical proteinchromosome CDS23714 804 - 0.402985
NA SSO_P144 adhesion protein, fragmentpSS_046 CDS129560 258 + 0.391473
NA SSO_3900 putative fimbrial chaperonechromosome CDS4116983 303 + 0.376238
NA SSO_2420 putative tail component of prophagechromosome CDS2558317 741 - 0.578947
NA SSO_2391 putative minor fimbrial subunitchromosome CDS2521916 525 - 0.457143
NA SSO_1980 hypothetical proteinchromosome CDS2081218 279 + 0.437276
cheA SSO_1229 sensory transducer kinase between chemo-signal receptors and CheB and CheYchromosome CDS1302515 1965 + 0.531298
cheB SSO_1234 response regulator for chemotaxischromosome CDS1309338 1050 + 0.537143
cheR SSO_1233 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS1308475 861 + 0.537747
cheW SSO_1230 positive regulator of CheA protein activitychromosome CDS1304500 504 + 0.515873
cheZ SSO_1236 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorchromosome CDS1310802 645 + 0.533333
csgA SSO_1053 curlin major subunitchromosome CDS1133630 453 + 0.507726
ecpD SSO_0152 probable pilin chaperone similar to PapDchromosome CDS169651 741 - 0.442645
fhiA SSO_0273 flagellar biosynthesischromosome CDS299468 1740 - 0.574713
flgA SSO_1092 flagellar protein for assembly of basal-body periplasmic P ringchromosome CDS1171509 660 - 0.527273
flgB SSO_1093 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1172323 417 + 0.534772
flgC SSO_1094 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1172743 405 + 0.533333
flgD SSO_1095 flagellar protein for initiation of hook assemblychromosome CDS1173159 696 + 0.548851
flgE SSO_1096 flagellar hook proteinchromosome CDS1173879 1206 + 0.515755
flgF SSO_1097 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1175104 756 + 0.589947
flgH SSO_1099 flagellar protein for basal-body outer-membrane L ringchromosome CDS1176856 699 + 0.53505
flgI SSO_1100 P-ring of flagella basal bodychromosome CDS1177566 1098 + 0.540073
flgJ SSO_1101 flagellar biosynthesis proteinchromosome CDS1178663 942 + 0.544586
flgK SSO_1102 flagellar hook-filament junction protein 1chromosome CDS1179670 1644 + 0.51764
flgL SSO_1103 flagellar hook-filament junction proteinchromosome CDS1181325 954 + 0.507338
flgM SSO_1091 flagellar proteinchromosome CDS1171140 294 - 0.520408
flgN SSO_1090 protein of flagellar biosynthesischromosome CDS1170719 417 - 0.479616
flhB SSO_1240 putative part of export apparatus for flagellar proteinschromosome CDS1314044 972 + 0.544239
fliC SSO_1193 flagellar filament structural proteinchromosome CDS1271890 1575 + 0.428571
fliE SSO_1995 flagellar basal-body componentchromosome CDS2093645 315 - 0.539683
fliF SSO_1996 flagellar basal-body MS(membrane and supramembrane)-ring and collar proteinchromosome CDS2094175 1659 + 0.546715
fliG SSO_1997 FliGchromosome CDS2095826 996 + 0.557229
fliH SSO_1998 flagellar biosynthesis proteinchromosome CDS2096793 708 + 0.573446
fliI SSO_1999 flagellum-specific ATP synthasechromosome CDS2097500 1374 + 0.580058
fliJ SSO_2000 flagellar fliJ proteinchromosome CDS2098892 444 + 0.527027
fliK SSO_2001 flagellar hook-length control proteinchromosome CDS2099332 1128 + 0.549645
fliL SSO_2002 flagellar biosynthesischromosome CDS2100564 465 + 0.526882
fliM SSO_2003 flagellar motor switch protein FliMchromosome CDS2101033 1005 + 0.529353
fliN SSO_2004 FliNchromosome CDS2102034 414 + 0.548309
fliO SSO_2005 flagellar biosynthesischromosome CDS2102450 366 + 0.54918
fliP SSO_2006 flagellar biosynthesischromosome CDS2102815 738 + 0.531165
fliQ SSO_2007 flagellar biosynthesischromosome CDS2103562 270 + 0.514815
fliR SSO_2008 flagellar biosynthesischromosome CDS2103840 786 + 0.477099
fliS SSO_1981 flagellar repressor of class 3a and 3b operonschromosome CDS2081511 411 + 0.493917
hofC SSO_0114 putative integral membrane proteinchromosome CDS123749 1203 - 0.526185
lpfA SSO_3899 putative major fimbrial subunitchromosome CDS4116363 573 + 0.47644
mbhA SSO_0272 putative motility proteinchromosome CDS301152 786 + 0.52799
motA SSO_1227 proton conductor component of motorchromosome CDS1300700 888 + 0.51464
motB SSO_1228 MotBchromosome CDS1301584 927 + 0.528587
mxiD SSO_P107 MxiDpSS_046 CDS97171 1701 + 0.33157
ppdA SSO_2983 prepilin peptidase dependent protein Achromosome CDS3133322 471 - 0.541401
ppdD SSO_0116 prelipin peptidase dependent proteinchromosome CDS126337 441 - 0.52381
sfmF SSO_0507 putative fimbrial-like proteinchromosome CDS536175 516 + 0.498062
spa33 SSO_P114 Spa33pSS_046 CDS105030 882 + 0.316327
spa40 SSO_P117 Spa40pSS_046 CDS107618 1029 + 0.316812
spa47 SSO_P111 Spa47pSS_046 CDS102448 1293 + 0.392111
spy SSO_1414 periplasmic protein related to spheroblast formationchromosome CDS1489467 462 + 0.519481
tap SSO_1232 methyl-accepting chemotaxis protein IVchromosome CDS1306855 1602 + 0.535581
tar SSO_1231 methyl-accepting chemotaxis protein IIchromosome CDS1305148 1662 + 0.529483
trg SSO_1721 methyl-accepting chemotaxis protein IIIchromosome CDS1823714 1641 - 0.511274
yadN SSO_0153 putative fimbrial-like proteinchromosome CDS170496 585 - 0.441026
ybgD SSO_0670 putative fimbrial-like proteinchromosome CDS712918 567 - 0.477954
ybgP SSO_0668 putative chaperonechromosome CDS709663 732 - 0.495902
ycbF SSO_0948 putative chaperonechromosome CDS1022013 738 + 0.51897
ycbQ SSO_0942 putative fimbrial-like proteinchromosome CDS1015950 552 + 0.434783
ycbR SSO_0943 putative chaperonechromosome CDS1016584 702 + 0.451567
yehC SSO_2159 putative chaperonechromosome CDS2263400 720 - 0.391667
yehD SSO_2160 putative fimbrial-like proteinchromosome CDS2264154 543 - 0.405157
yfcS SSO_2393 putative chaperonechromosome CDS2523427 645 - 0.486822
yfcU SSO_2394 PapC-like porin proteinchromosome CDS2524198 2643 - 0.510027
yggR SSO_3105 putative protein transportchromosome CDS3265817 1026 - 0.54386
ygiL SSO_3180 putative fimbrial-like proteinchromosome CDS3338921 552 + 0.443841
yifL SSO_3981 Uncharacterized conserved proteinchromosome CDS4203744 204 + 0.52451
yiiO SSO_4083 Uncharacterized periplasmic proteinchromosome CDS4319859 504 + 0.5
yjaI SSO_4175 conserved hypothetical proteinchromosome CDS4419475 567 - 0.516755
yqiH SSO_3183 putative membrane proteinchromosome CDS3342966 759 + 0.389987
yraJ SSO_3289 putative outer membrane proteinchromosome CDS3464292 2517 + 0.473977
yraK SSO_3291 putative fimbrial proteinchromosome CDS3468293 954 + 0.474843